Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4c19
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.71 
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   8.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.8  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 390 NLCIKFLLRPFVFRIFVVILEFFWVYF 470
           N C  F+ +  +F IFV    + W  F
Sbjct: 528 NFCFGFITKQLIFMIFVTYQLYCWSSF 554


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +3

Query: 6   VKFSNKINMRGKLLWNV 56
           V+F+N+ N+ G ++W++
Sbjct: 342 VEFANEKNLGGVMVWSL 358


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 370 LIL*SFASNIYWN*IGVFEWFF 305
           +IL SF +N Y+    VFE F+
Sbjct: 288 IILTSFLNNFYFIIFQVFESFY 309


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -3

Query: 457 KNSRITTKIRKTKGLNKNLIHKFQMNPQLLIL*SFASNIYWN*IGVF 317
           KN  I  K+R+       L+ K       ++L +FAS++ +  I +F
Sbjct: 259 KNEIIWKKLREDYTRQCRLVRKVDKEIAYIVLLTFASDLLFILIQLF 305


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,891
Number of Sequences: 336
Number of extensions: 3083
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)