Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4c17
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   3.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   4.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   4.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.9  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.9  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +1

Query: 454 VVKYLFRVEKLIKMKLPLKQHLGRLMKRLGFLLKK*TSGAMVLQY 588
           + KYL +   +I+  +P   +L  L+  LG+ +   T  A  L +
Sbjct: 447 IEKYLSKARYVIQTWVPASDNLPTLLLELGYRIIVSTKDAWYLDH 491


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +3

Query: 600 NKIMITPVIGTIFNFKPESLNINVKEVAEVFTV 698
           N +   P +  +F+ KP S+N N+K   ++ ++
Sbjct: 192 NAVCFVPGVVAMFSRKPCSINENLKMGLDIASI 224


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +3

Query: 600 NKIMITPVIGTIFNFKPESLNINVKEVAEVFTV 698
           N +   P +  +F+ KP S+N N+K   ++ ++
Sbjct: 192 NAVCFVPGVVAMFSRKPCSINENLKMGLDIASI 224


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 578 TMAPDVYFFSRKPNLFISLPKCCFNGSFI 492
           T    VY+F     L + L   CF GS+I
Sbjct: 314 TTLETVYYFISLGLLILRLVSVCFYGSWI 342


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +2

Query: 620 SNWYYIQF*TRIIEYQCERSSRSFYSPN 703
           +NW+ I    RI++   ++S+R+ +SP+
Sbjct: 382 NNWF-INARRRIVQPMIDQSNRAVFSPH 408


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = -3

Query: 695 CKNFCYFFHIDIQ*FWFKIEYSTNYW 618
           CKNFC+ F      F   + Y    W
Sbjct: 526 CKNFCFGFITKQLIFMIFVTYQLYCW 551


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 522 ETDEEIGLSAKEIDVW 569
           E  E +GLS ++I +W
Sbjct: 189 ELAENLGLSERQIKIW 204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,856
Number of Sequences: 336
Number of extensions: 3696
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)