Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4c17
         (739 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          27   0.80 
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    25   3.2  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   5.6  
EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    23   9.8  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 26.6 bits (56), Expect = 0.80
 Identities = 12/46 (26%), Positives = 28/46 (60%)
 Frame = +3

Query: 339 PKFGSTPTATAAVLVPLCRVAEVPSLLYTVRSSNLRTNSGQISFPG 476
           P   ++P + A+ + P    ++  S  YT+++ NL +++G +++PG
Sbjct: 77  PSSVASPNSRASNMSPESSASD-QSAAYTLQNLNLSSSAGTMNYPG 121


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 411 SLLYTVRSSNLRTNSGQISFPGGKTDKNETP 503
           S LYT + S+   N G    PG +  +  TP
Sbjct: 162 SKLYTSKGSSSSGNLGASGVPGAEPSRGSTP 192


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 501 PIETALRETDEEIGLSAKEI 560
           PIE  LR+TDE I L  +++
Sbjct: 4   PIEIPLRDTDEVIELDPEQL 23


>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 566 DVYFFSRKPNLFISL 522
           D+YFFSR    FI++
Sbjct: 224 DIYFFSRNSKRFIAI 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,194
Number of Sequences: 2352
Number of extensions: 14352
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)