Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4c13
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    27   0.21 
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    27   0.21 
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    27   0.21 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    26   0.36 
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    25   0.48 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   1.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.4  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   4.5  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   5.9  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = -3

Query: 335 RCLFIHCQLTFLDDELHFRTEFYFDNQILVCSALFVLVRRKNCHFVNEYLYQVHLLHDCQ 156
           R  F + QLT L+ E HF        +I + SAL +   +    F N  + Q   + +  
Sbjct: 257 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRMKEGL 316

Query: 155 LVPGPVLRS 129
           + P P+  S
Sbjct: 317 IPPEPISAS 325


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = -3

Query: 335 RCLFIHCQLTFLDDELHFRTEFYFDNQILVCSALFVLVRRKNCHFVNEYLYQVHLLHDCQ 156
           R  F + QLT L+ E HF        +I + SAL +   +    F N  + Q   + +  
Sbjct: 46  RTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRMKEGL 105

Query: 155 LVPGPVLRS 129
           + P P+  S
Sbjct: 106 IPPEPISAS 114


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = -3

Query: 335 RCLFIHCQLTFLDDELHFRTEFYFDNQILVCSALFVLVRRKNCHFVNEYLYQVHLLHDCQ 156
           R  F + QLT L+ E HF        +I + SAL +   +    F N  + Q   + +  
Sbjct: 46  RTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRMKEGL 105

Query: 155 LVPGPVLRS 129
           + P P+  S
Sbjct: 106 IPPEPISAS 114


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +3

Query: 438 MILSKFPLEIEVWNDDENEVEIFVGIGTMHWDTMFFHMLKDTAEA 572
           +I +  P + + W D   ++E  +  G  HW +  FH    TA +
Sbjct: 41  LIPATAPQKPDKWEDVMADIERVIMPGVTHWHSPRFHAYFPTANS 85


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 407 SVPFISRYCSDD 442
           SVPFISRY S+D
Sbjct: 60  SVPFISRYASED 71


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 354 DENGRRKWSRTIRVGKSYLFPSYPDTVLMILSKFPLEIEVWNDDENEVEIFV 509
           D++ RR   + +RV    + P Y +    I      EI   NDDE +V  FV
Sbjct: 590 DQSARRVAQKYLRV----VDPDYYEFETHIFFDDAFEISDHNDDETQVNRFV 637


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 354 DENGRRKWSRTIRVGKSYLFPSYPDTVLMILSKFPLEIEVWNDDENEVEIFV 509
           D++ RR   + +RV    + P Y +    I      EI   NDDE +V  FV
Sbjct: 590 DQSARRVAQKYLRV----VDPDYYEFETHIFFDDAFEISDHNDDETQVNRFV 637


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 354 DENGRRKWSRTIRVGKSYLFPSYPDTVLMILSKFPLEIEVWNDDENEVEIFV 509
           D++ RR   + +RV    + P Y +    I      EI   NDDE +V  FV
Sbjct: 590 DQSARRVAQKYLRV----VDPDYYEFETHIFFDDAFEISDHNDDETQVNRFV 637


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 354 DENGRRKWSRTIRVGKSYLFPSYPDTVLMILSKFPLEIEVWNDDENEVEIFV 509
           D++ RR   + +RV    + P Y +    I      EI   NDDE +V  FV
Sbjct: 590 DQSARRVAQKYLRV----VDPDYYEFETHIFFDDAFEISDHNDDETQVNRFV 637


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +3

Query: 609 TPLFAECCCRQVGEISFILRLSALGDSIITEFPQLMKDPE 728
           TP+       ++GE++ ++ L  L   +I  F  L +D +
Sbjct: 180 TPMVRRAAATKLGELAQVVELEYLKTDLIPMFLSLTQDEQ 219


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -3

Query: 308 TFLDDELHFRTEFYFDNQILVCSALFVLVRRKNCHFVNEYLYQVHLLHD 162
           T++ D  +F  E+    ++L   +  VL+R K  +     ++  HL  D
Sbjct: 159 TYIFDVPNFVNEYVQAIEVLYICSYTVLIRNKISNLNTSLIHSTHLNGD 207



 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 206 HFVNEYLYQVHLLHDC 159
           +FVNEY+  + +L+ C
Sbjct: 166 NFVNEYVQAIEVLYIC 181


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/47 (17%), Positives = 21/47 (44%)
 Frame = -1

Query: 661 MKDISPTCLQQHSANNGVHCLIDNGSWSLQASAVSLSIWKNIVSQCI 521
           +++I           N + C++D G  + +A  +   I + + + C+
Sbjct: 25  LREIDTILKNDQMTRNYLDCVLDKGKCTKEAEKLKKGITETMKNGCV 71


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = -1

Query: 655 DISPTCLQQHSANNGVHCLIDNGSWSLQASAVSLSIWKNIVSQC 524
           DI      +    N V+CL+D G  + +   +  +I + + + C
Sbjct: 27  DIDDILSNERLLKNYVNCLLDKGRCTPEGKKLKSTIPEALSTDC 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,391
Number of Sequences: 336
Number of extensions: 4271
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)