Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4c12
         (625 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1D6L6 Cluster: Putative uncharacterized protein; n=1; ...    36   1.0  
UniRef50_Q7RPW6 Cluster: Putative uncharacterized protein PY0133...    34   2.4  
UniRef50_A5KAP9 Cluster: Putative uncharacterized protein; n=2; ...    34   2.4  
UniRef50_P24870 Cluster: G2/mitotic-specific cyclin-3; n=2; Sacc...    33   4.2  
UniRef50_A6CDL7 Cluster: Probable ribosomal RNA small subunit me...    32   9.7  
UniRef50_Q4Z9D6 Cluster: ORF010; n=1; Staphylococcus phage Twort...    32   9.7  
UniRef50_Q8I1Y3 Cluster: Putative uncharacterized protein PFD022...    32   9.7  
UniRef50_A3GI42 Cluster: Zinc Finger Protein C2H2-like protein; ...    32   9.7  

>UniRef50_Q1D6L6 Cluster: Putative uncharacterized protein; n=1;
           Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
           protein - Myxococcus xanthus (strain DK 1622)
          Length = 226

 Score = 35.5 bits (78), Expect = 1.0
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +2

Query: 173 EQINPFTKKTVYTQTYPTKLIPAAPRKACCFYCS*STVHKIYSISSYAKQE 325
           ++++P T KT  T+ Y  +L  +AP +A  F     TVH ++ +    K E
Sbjct: 70  DRVSPLTNKTPATEFYEQRLAGSAPEEANAFRSFTETVHGLFEVRKLGKGE 120


>UniRef50_Q7RPW6 Cluster: Putative uncharacterized protein PY01338;
            n=14; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY01338 - Plasmodium yoelii yoelii
          Length = 3644

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 511  KFKSKERYCAKYLYDCKQIKYGFV 440
            K ++    C KYL+DCKQ+KY F+
Sbjct: 1508 KLRTNSILCLKYLFDCKQLKYWFL 1531


>UniRef50_A5KAP9 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 4139

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 511  KFKSKERYCAKYLYDCKQIKYGFV 440
            K ++    C KYL+DCKQ+KY F+
Sbjct: 1526 KIRTNSILCLKYLFDCKQLKYWFL 1549


>UniRef50_P24870 Cluster: G2/mitotic-specific cyclin-3; n=2;
           Saccharomyces cerevisiae|Rep: G2/mitotic-specific
           cyclin-3 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 427

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -2

Query: 543 FNHLFRIYYCPNLNPKKDTVLNICMIVNKLSTDL*TSCGKLIFLLTFQEHYQDSSPK 373
           + H FR YY   L+P  D V ++ M+  +LS ++     KL  L     +Y D  P+
Sbjct: 140 WEHAFRTYYRTTLDPNDDDVYDVVMVA-ELSNEIFEYMRKLEDLYKPNPYYMDKQPE 195


>UniRef50_A6CDL7 Cluster: Probable ribosomal RNA small subunit
           methyltransferase C; n=1; Planctomyces maris DSM
           8797|Rep: Probable ribosomal RNA small subunit
           methyltransferase C - Planctomyces maris DSM 8797
          Length = 364

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -1

Query: 292 FMNSALRAIKAASLSWCRWNQFRWVSLRVYSFFCKRIDLFVDSLMFHFHIDSCKP 128
           F+   LRA+K   L      Q++W + R+   F    D+ +D  + HF + + KP
Sbjct: 312 FLQMCLRALKPGGLLQFSTKQYQWYAHRLLDLF---TDVAIDGAVHHFMLSARKP 363


>UniRef50_Q4Z9D6 Cluster: ORF010; n=1; Staphylococcus phage
           Twort|Rep: ORF010 - Staphylococcus phage Twort
          Length = 604

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +2

Query: 50  KGLSKMESNDFRPYFILIRKEEEKGDRFARINMEVKHQAIDEQINPFTKKTVYTQTYPTK 229
           KGL +++S+DF+   +LI K  +   R   + + V +  +    NP  K   ++  YP +
Sbjct: 10  KGLKQVDSDDFKLQELLIGKVVKVNYRTHTVEVNVNNNTLG--TNPVKKGDTFSVPYPRR 67

Query: 230 LIPAAP 247
            I   P
Sbjct: 68  FIGTTP 73


>UniRef50_Q8I1Y3 Cluster: Putative uncharacterized protein PFD0225w;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFD0225w - Plasmodium falciparum
            (isolate 3D7)
          Length = 4138

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 511  KFKSKERYCAKYLYDCKQIKYGFV 440
            K ++    C KYL++CKQIKY F+
Sbjct: 1485 KIRTNAILCLKYLFECKQIKYIFM 1508


>UniRef50_A3GI42 Cluster: Zinc Finger Protein C2H2-like protein;
           n=1; Pichia stipitis|Rep: Zinc Finger Protein C2H2-like
           protein - Pichia stipitis (Yeast)
          Length = 1195

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 594 FSDIHDDNRPNKPYAIQFNHLFRIYYCPNL-NPKKDTVLNICMIVNKLS 451
           F  + D NR  K Y ++FN  F   + P+L NP  D   NI ++++  S
Sbjct: 632 FPSLEDLNRYMKLYELEFNRYFPFIHLPSLKNPMVDNFENIPLLLSMAS 680


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,803,823
Number of Sequences: 1657284
Number of extensions: 11453105
Number of successful extensions: 29832
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29832
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)