Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4c08
         (432 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    24   2.7  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    23   3.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   3.5  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    23   4.6  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    23   6.1  

>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 215 RVGRACSRCLKRISIRRCFKCSWTIFRFKSRTC 313
           R+G +      +I  RRCFKC W    F SR C
Sbjct: 401 RIGWSICPVKIQIPKRRCFKC-WETGHF-SRDC 431


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 119 PANIRILPSYLIIGYFSIALRHSLFY 42
           P N R L  Y ++G F  A+R   FY
Sbjct: 378 PEN-RFLEGYGVVGEFQTAMRDPAFY 402


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 369 RAGVPGAPALTPTVXVKG 422
           R G+PGAP L  +  VKG
Sbjct: 79  RDGMPGAPGLPGSKGVKG 96



 Score = 23.0 bits (47), Expect = 4.6
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 333 LCGVMKTYRQKXRAGVPGAPALTPTV-XVKG 422
           L G +    +K   GVPG+P L  TV  +KG
Sbjct: 446 LTGPVGLSGRKGDRGVPGSPGLPATVAAIKG 476


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = -1

Query: 279 EHLKHRRMEILLRHLEHARPTLRALAFQSYKCXRAWRLP*DPSHTQ*VCGNLLSGQ 112
           EHL+HR M  + R ++     +R      +   R   LP D  H    C  LL  Q
Sbjct: 147 EHLRHRTMRAVKRKMDELNEQIRTYFQNEFVEYRDVCLP-DEDH----CMKLLHAQ 197


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 107 RILPSYLIIGYFSIALRHSLFY 42
           R L  Y ++G F  A+R   FY
Sbjct: 380 RFLEGYGVVGEFQTAMRDPSFY 401


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,502
Number of Sequences: 2352
Number of extensions: 8851
Number of successful extensions: 60
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)