Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4c08
(432 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear r... 119 4e-27
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 119 4e-27
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 119 4e-27
AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear r... 119 4e-27
AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear r... 119 4e-27
BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein. 118 6e-27
BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for IM... 118 6e-27
BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein. 118 6e-27
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 118 6e-27
AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein. 118 6e-27
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 118 6e-27
AL136082-5|CAI20448.1| 185|Homo sapiens RP1-3J17.2 protein. 118 6e-27
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 118 6e-27
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 118 6e-27
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 118 6e-27
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 118 6e-27
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 118 6e-27
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 93 3e-19
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 89 8e-18
BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein. 89 8e-18
BC127817-1|AAI27818.1| 283|Homo sapiens KIAA0574 protein protein. 30 2.9
AL731557-2|CAI14825.1| 334|Homo sapiens ventral anterior homeob... 30 3.9
BC112274-1|AAI12275.1| 555|Homo sapiens coiled-coil domain cont... 29 6.8
BC105055-1|AAI05056.1| 555|Homo sapiens coiled-coil domain cont... 29 6.8
AK075056-1|BAC11373.1| 555|Homo sapiens protein ( Homo sapiens ... 29 6.8
>DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear
ribonucleoprotein-R2 protein.
Length = 595
Score = 119 bits (287), Expect = 4e-27
Identities = 60/106 (56%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Frame = +3
Query: 63 GNG-EISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALD 239
GN ++ +E S V TE Y LIE GL KVA +LD I++TG +A+ +LDERA+D
Sbjct: 7 GNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDLDERAID 66
Query: 240 ALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAG 377
AL+EF +GALSVL QF +S+L HV NKSAFLCGVMKTYRQ+ + G
Sbjct: 67 ALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
>BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein.
Length = 636
Score = 119 bits (287), Expect = 4e-27
Identities = 60/106 (56%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Frame = +3
Query: 63 GNG-EISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALD 239
GN ++ +E S V TE Y LIE GL KVA +LD I++TG +A+ +LDERA+D
Sbjct: 7 GNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDLDERAID 66
Query: 240 ALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAG 377
AL+EF +GALSVL QF +S+L HV NKSAFLCGVMKTYRQ+ + G
Sbjct: 67 ALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
>AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 636
Score = 119 bits (287), Expect = 4e-27
Identities = 60/106 (56%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Frame = +3
Query: 63 GNG-EISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALD 239
GN ++ +E S V TE Y LIE GL KVA +LD I++TG +A+ +LDERA+D
Sbjct: 7 GNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDLDERAID 66
Query: 240 ALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAG 377
AL+EF +GALSVL QF +S+L HV NKSAFLCGVMKTYRQ+ + G
Sbjct: 67 ALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
>AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 119 bits (287), Expect = 4e-27
Identities = 60/106 (56%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Frame = +3
Query: 63 GNG-EISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALD 239
GN ++ +E S V TE Y LIE GL KVA +LD I++TG +A+ +LDERA+D
Sbjct: 7 GNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDLDERAID 66
Query: 240 ALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAG 377
AL+EF +GALSVL QF +S+L HV NKSAFLCGVMKTYRQ+ + G
Sbjct: 67 ALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
>AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 119 bits (287), Expect = 4e-27
Identities = 60/106 (56%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Frame = +3
Query: 63 GNG-EISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALD 239
GN ++ +E S V TE Y LIE GL KVA +LD I++TG +A+ +LDERA+D
Sbjct: 7 GNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDLDERAID 66
Query: 240 ALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAG 377
AL+EF +GALSVL QF +S+L HV NKSAFLCGVMKTYRQ+ + G
Sbjct: 67 ALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
>BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein.
Length = 527
Score = 118 bits (285), Expect = 6e-27
Identities = 65/122 (53%), Positives = 81/122 (66%)
Frame = +3
Query: 63 GNGEISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALDA 242
GNG +E S V +E++ L++ GL KVA KLD IY G +AH++LDERA++A
Sbjct: 8 GNGT---EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEA 64
Query: 243 LKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTPTVXVKG 422
LKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A + KG
Sbjct: 65 LKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS------SKG 118
Query: 423 PD 428
PD
Sbjct: 119 PD 120
>BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for
IMAGE:4079825) protein.
Length = 453
Score = 118 bits (285), Expect = 6e-27
Identities = 65/122 (53%), Positives = 81/122 (66%)
Frame = +3
Query: 63 GNGEISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALDA 242
GNG +E S V +E++ L++ GL KVA KLD IY G +AH++LDERA++A
Sbjct: 44 GNGT---EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEA 100
Query: 243 LKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTPTVXVKG 422
LKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A + KG
Sbjct: 101 LKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS------SKG 154
Query: 423 PD 428
PD
Sbjct: 155 PD 156
>BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein.
Length = 417
Score = 118 bits (285), Expect = 6e-27
Identities = 65/122 (53%), Positives = 81/122 (66%)
Frame = +3
Query: 63 GNGEISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALDA 242
GNG +E S V +E++ L++ GL KVA KLD IY G +AH++LDERA++A
Sbjct: 8 GNGT---EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEA 64
Query: 243 LKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTPTVXVKG 422
LKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A + KG
Sbjct: 65 LKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS------SKG 118
Query: 423 PD 428
PD
Sbjct: 119 PD 120
>AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein.
Length = 561
Score = 118 bits (285), Expect = 6e-27
Identities = 65/122 (53%), Positives = 81/122 (66%)
Frame = +3
Query: 63 GNGEISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALDA 242
GNG +E S V +E++ L++ GL KVA KLD IY G +AH++LDERA++A
Sbjct: 8 GNGT---EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEA 64
Query: 243 LKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTPTVXVKG 422
LKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A + KG
Sbjct: 65 LKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS------SKG 118
Query: 423 PD 428
PD
Sbjct: 119 PD 120
>AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein.
Length = 588
Score = 118 bits (285), Expect = 6e-27
Identities = 65/122 (53%), Positives = 81/122 (66%)
Frame = +3
Query: 63 GNGEISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALDA 242
GNG +E S V +E++ L++ GL KVA KLD IY G +AH++LDERA++A
Sbjct: 8 GNGT---EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEA 64
Query: 243 LKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTPTVXVKG 422
LKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A + KG
Sbjct: 65 LKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS------SKG 118
Query: 423 PD 428
PD
Sbjct: 119 PD 120
>AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein.
Length = 623
Score = 118 bits (285), Expect = 6e-27
Identities = 65/122 (53%), Positives = 81/122 (66%)
Frame = +3
Query: 63 GNGEISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALDA 242
GNG +E S V +E++ L++ GL KVA KLD IY G +AH++LDERA++A
Sbjct: 8 GNGT---EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEA 64
Query: 243 LKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTPTVXVKG 422
LKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A + KG
Sbjct: 65 LKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS------SKG 118
Query: 423 PD 428
PD
Sbjct: 119 PD 120
>AL136082-5|CAI20448.1| 185|Homo sapiens RP1-3J17.2 protein.
Length = 185
Score = 118 bits (285), Expect = 6e-27
Identities = 65/122 (53%), Positives = 81/122 (66%)
Frame = +3
Query: 63 GNGEISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALDA 242
GNG +E S V +E++ L++ GL KVA KLD IY G +AH++LDERA++A
Sbjct: 8 GNGT---EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEA 64
Query: 243 LKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTPTVXVKG 422
LKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A + KG
Sbjct: 65 LKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS------SKG 118
Query: 423 PD 428
PD
Sbjct: 119 PD 120
>AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein.
Length = 623
Score = 118 bits (285), Expect = 6e-27
Identities = 65/122 (53%), Positives = 81/122 (66%)
Frame = +3
Query: 63 GNGEISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALDA 242
GNG +E S V +E++ L++ GL KVA KLD IY G +AH++LDERA++A
Sbjct: 8 GNGT---EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEA 64
Query: 243 LKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTPTVXVKG 422
LKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A + KG
Sbjct: 65 LKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS------SKG 118
Query: 423 PD 428
PD
Sbjct: 119 PD 120
>AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein.
Length = 562
Score = 118 bits (285), Expect = 6e-27
Identities = 65/122 (53%), Positives = 81/122 (66%)
Frame = +3
Query: 63 GNGEISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALDA 242
GNG +E S V +E++ L++ GL KVA KLD IY G +AH++LDERA++A
Sbjct: 8 GNGT---EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEA 64
Query: 243 LKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTPTVXVKG 422
LKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A + KG
Sbjct: 65 LKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS------SKG 118
Query: 423 PD 428
PD
Sbjct: 119 PD 120
>AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 623
Score = 118 bits (285), Expect = 6e-27
Identities = 65/122 (53%), Positives = 81/122 (66%)
Frame = +3
Query: 63 GNGEISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALDA 242
GNG +E S V +E++ L++ GL KVA KLD IY G +AH++LDERA++A
Sbjct: 8 GNGT---EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEA 64
Query: 243 LKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTPTVXVKG 422
LKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A + KG
Sbjct: 65 LKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS------SKG 118
Query: 423 PD 428
PD
Sbjct: 119 PD 120
>AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein.
Length = 562
Score = 118 bits (285), Expect = 6e-27
Identities = 65/122 (53%), Positives = 81/122 (66%)
Frame = +3
Query: 63 GNGEISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALDA 242
GNG +E S V +E++ L++ GL KVA KLD IY G +AH++LDERA++A
Sbjct: 8 GNGT---EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEA 64
Query: 243 LKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTPTVXVKG 422
LKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A + KG
Sbjct: 65 LKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS------SKG 118
Query: 423 PD 428
PD
Sbjct: 119 PD 120
>AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein.
Length = 623
Score = 118 bits (285), Expect = 6e-27
Identities = 65/122 (53%), Positives = 81/122 (66%)
Frame = +3
Query: 63 GNGEISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALDA 242
GNG +E S V +E++ L++ GL KVA KLD IY G +AH++LDERA++A
Sbjct: 8 GNGT---EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEA 64
Query: 243 LKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTPTVXVKG 422
LKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G A + KG
Sbjct: 65 LKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS------SKG 118
Query: 423 PD 428
PD
Sbjct: 119 PD 120
>AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 534
Score = 93.5 bits (222), Expect = 3e-19
Identities = 47/77 (61%), Positives = 57/77 (74%)
Frame = +3
Query: 198 GKLAHAELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAG 377
G +AH++LDERA++ALKEF DGAL+VL QF DS+L HV NKSAFLCGVMKTYRQ+ + G
Sbjct: 22 GLVAHSDLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 81
Query: 378 VPGAPALTPTVXVKGPD 428
A + KGPD
Sbjct: 82 TKVADS------SKGPD 92
>BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 88.6 bits (210), Expect = 8e-18
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = +3
Query: 198 GKLAHAELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAG 377
G +A+ +LDERA+DAL+EF +GALSVL QF +S+L HV NKSAFLCGVMKTYRQ+ + G
Sbjct: 30 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 89
>BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein.
Length = 607
Score = 88.6 bits (210), Expect = 8e-18
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = +3
Query: 198 GKLAHAELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAG 377
G +A+ +LDERA+DAL+EF +GALSVL QF +S+L HV NKSAFLCGVMKTYRQ+ + G
Sbjct: 27 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 86
>BC127817-1|AAI27818.1| 283|Homo sapiens KIAA0574 protein protein.
Length = 283
Score = 30.3 bits (65), Expect = 2.9
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -1
Query: 225 RPTLRALAFQSYKCXRAWRLP*DPSHTQ*---VCGNLLSGQHQNPSQLP 88
R LR L + C RLP PS Q + G L +GQHQ+PSQ P
Sbjct: 229 RDCLR-LCLGALPCLALPRLPVGPSFHQRGTQIPGKLTNGQHQSPSQRP 276
>AL731557-2|CAI14825.1| 334|Homo sapiens ventral anterior homeobox
1 protein.
Length = 334
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 294 DSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTP 404
DS L V +++A C V++ Q PG PAL P
Sbjct: 162 DSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALLP 198
>BC112274-1|AAI12275.1| 555|Homo sapiens coiled-coil domain
containing 96 protein.
Length = 555
Score = 29.1 bits (62), Expect = 6.8
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 309 VRDLNLKIVQEHLKHRRMEILLRHLEHARPTL 214
+RDL K+ + L HRR+E L RH HA TL
Sbjct: 508 LRDLEEKVDKTELLHRRLESLKRH--HASLTL 537
>BC105055-1|AAI05056.1| 555|Homo sapiens coiled-coil domain
containing 96 protein.
Length = 555
Score = 29.1 bits (62), Expect = 6.8
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 309 VRDLNLKIVQEHLKHRRMEILLRHLEHARPTL 214
+RDL K+ + L HRR+E L RH HA TL
Sbjct: 508 LRDLEEKVDKTELLHRRLESLKRH--HASLTL 537
>AK075056-1|BAC11373.1| 555|Homo sapiens protein ( Homo sapiens
cDNA FLJ90575 fis, clone OVARC1001952, weakly similar to
TRICHOHYALIN. ).
Length = 555
Score = 29.1 bits (62), Expect = 6.8
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 309 VRDLNLKIVQEHLKHRRMEILLRHLEHARPTL 214
+RDL K+ + L HRR+E L RH HA TL
Sbjct: 508 LRDLEEKVDKTELLHRRLESLKRH--HASLTL 537
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,066,480
Number of Sequences: 237096
Number of extensions: 1218018
Number of successful extensions: 6033
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6033
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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