BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4c08
(432 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-2862|AAF55805.2| 707|Drosophila melanogaster CG17838-P... 180 7e-46
AE014297-2861|AAN13831.1| 571|Drosophila melanogaster CG17838-P... 180 7e-46
AY058477-1|AAL13706.1| 529|Drosophila melanogaster GH28335p pro... 179 1e-45
AE014297-2865|AAN13835.1| 529|Drosophila melanogaster CG17838-P... 179 1e-45
AE014297-2864|AAN13834.1| 529|Drosophila melanogaster CG17838-P... 179 1e-45
AE014297-2863|AAN13833.1| 529|Drosophila melanogaster CG17838-P... 179 1e-45
AE014297-2858|AAN13832.2| 563|Drosophila melanogaster CG17838-P... 179 1e-45
BT003653-1|AAO39657.1| 626|Drosophila melanogaster AT01548p pro... 139 2e-33
BT022147-1|AAY51542.1| 236|Drosophila melanogaster IP01435p pro... 30 1.2
AE014298-1853|AAF48233.1| 232|Drosophila melanogaster CG4318-PA... 30 1.2
>AE014297-2862|AAF55805.2| 707|Drosophila melanogaster CG17838-PD,
isoform D protein.
Length = 707
Score = 180 bits (438), Expect = 7e-46
Identities = 94/129 (72%), Positives = 102/129 (79%), Gaps = 3/129 (2%)
Frame = +3
Query: 51 RMAEGNGEISYDEVAGKDSDVG---RTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAEL 221
+MAEGNGE+ D++ K D G RTEDY KL+EYGLD KVA KLD IYKTGKLAHAEL
Sbjct: 42 KMAEGNGEL-LDDINQKADDRGDGERTEDYPKLLEYGLDKKVAGKLDEIYKTGKLAHAEL 100
Query: 222 DERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALT 401
DERALDALKEFP DGAL+VLGQFL+SNLEHVSNKSA+LCGVMKTYRQK RA G A
Sbjct: 101 DERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRASQQGVAA-- 158
Query: 402 PTVXVKGPD 428
VKGPD
Sbjct: 159 -PATVKGPD 166
>AE014297-2861|AAN13831.1| 571|Drosophila melanogaster CG17838-PE,
isoform E protein.
Length = 571
Score = 180 bits (438), Expect = 7e-46
Identities = 94/129 (72%), Positives = 102/129 (79%), Gaps = 3/129 (2%)
Frame = +3
Query: 51 RMAEGNGEISYDEVAGKDSDVG---RTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAEL 221
+MAEGNGE+ D++ K D G RTEDY KL+EYGLD KVA KLD IYKTGKLAHAEL
Sbjct: 42 KMAEGNGEL-LDDINQKADDRGDGERTEDYPKLLEYGLDKKVAGKLDEIYKTGKLAHAEL 100
Query: 222 DERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALT 401
DERALDALKEFP DGAL+VLGQFL+SNLEHVSNKSA+LCGVMKTYRQK RA G A
Sbjct: 101 DERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRASQQGVAA-- 158
Query: 402 PTVXVKGPD 428
VKGPD
Sbjct: 159 -PATVKGPD 166
>AY058477-1|AAL13706.1| 529|Drosophila melanogaster GH28335p
protein.
Length = 529
Score = 179 bits (436), Expect = 1e-45
Identities = 94/128 (73%), Positives = 101/128 (78%), Gaps = 3/128 (2%)
Frame = +3
Query: 54 MAEGNGEISYDEVAGKDSDVG---RTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELD 224
MAEGNGE+ D++ K D G RTEDY KL+EYGLD KVA KLD IYKTGKLAHAELD
Sbjct: 1 MAEGNGEL-LDDINQKADDRGDGERTEDYPKLLEYGLDKKVAGKLDEIYKTGKLAHAELD 59
Query: 225 ERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTP 404
ERALDALKEFP DGAL+VLGQFL+SNLEHVSNKSA+LCGVMKTYRQK RA G A
Sbjct: 60 ERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRASQQGVAA--- 116
Query: 405 TVXVKGPD 428
VKGPD
Sbjct: 117 PATVKGPD 124
>AE014297-2865|AAN13835.1| 529|Drosophila melanogaster CG17838-PB,
isoform B protein.
Length = 529
Score = 179 bits (436), Expect = 1e-45
Identities = 94/128 (73%), Positives = 101/128 (78%), Gaps = 3/128 (2%)
Frame = +3
Query: 54 MAEGNGEISYDEVAGKDSDVG---RTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELD 224
MAEGNGE+ D++ K D G RTEDY KL+EYGLD KVA KLD IYKTGKLAHAELD
Sbjct: 1 MAEGNGEL-LDDINQKADDRGDGERTEDYPKLLEYGLDKKVAGKLDEIYKTGKLAHAELD 59
Query: 225 ERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTP 404
ERALDALKEFP DGAL+VLGQFL+SNLEHVSNKSA+LCGVMKTYRQK RA G A
Sbjct: 60 ERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRASQQGVAA--- 116
Query: 405 TVXVKGPD 428
VKGPD
Sbjct: 117 PATVKGPD 124
>AE014297-2864|AAN13834.1| 529|Drosophila melanogaster CG17838-PF,
isoform F protein.
Length = 529
Score = 179 bits (436), Expect = 1e-45
Identities = 94/128 (73%), Positives = 101/128 (78%), Gaps = 3/128 (2%)
Frame = +3
Query: 54 MAEGNGEISYDEVAGKDSDVG---RTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELD 224
MAEGNGE+ D++ K D G RTEDY KL+EYGLD KVA KLD IYKTGKLAHAELD
Sbjct: 1 MAEGNGEL-LDDINQKADDRGDGERTEDYPKLLEYGLDKKVAGKLDEIYKTGKLAHAELD 59
Query: 225 ERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTP 404
ERALDALKEFP DGAL+VLGQFL+SNLEHVSNKSA+LCGVMKTYRQK RA G A
Sbjct: 60 ERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRASQQGVAA--- 116
Query: 405 TVXVKGPD 428
VKGPD
Sbjct: 117 PATVKGPD 124
>AE014297-2863|AAN13833.1| 529|Drosophila melanogaster CG17838-PC,
isoform C protein.
Length = 529
Score = 179 bits (436), Expect = 1e-45
Identities = 94/128 (73%), Positives = 101/128 (78%), Gaps = 3/128 (2%)
Frame = +3
Query: 54 MAEGNGEISYDEVAGKDSDVG---RTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELD 224
MAEGNGE+ D++ K D G RTEDY KL+EYGLD KVA KLD IYKTGKLAHAELD
Sbjct: 1 MAEGNGEL-LDDINQKADDRGDGERTEDYPKLLEYGLDKKVAGKLDEIYKTGKLAHAELD 59
Query: 225 ERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTP 404
ERALDALKEFP DGAL+VLGQFL+SNLEHVSNKSA+LCGVMKTYRQK RA G A
Sbjct: 60 ERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRASQQGVAA--- 116
Query: 405 TVXVKGPD 428
VKGPD
Sbjct: 117 PATVKGPD 124
>AE014297-2858|AAN13832.2| 563|Drosophila melanogaster CG17838-PA,
isoform A protein.
Length = 563
Score = 179 bits (436), Expect = 1e-45
Identities = 94/128 (73%), Positives = 101/128 (78%), Gaps = 3/128 (2%)
Frame = +3
Query: 54 MAEGNGEISYDEVAGKDSDVG---RTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELD 224
MAEGNGE+ D++ K D G RTEDY KL+EYGLD KVA KLD IYKTGKLAHAELD
Sbjct: 35 MAEGNGEL-LDDINQKADDRGDGERTEDYPKLLEYGLDKKVAGKLDEIYKTGKLAHAELD 93
Query: 225 ERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTP 404
ERALDALKEFP DGAL+VLGQFL+SNLEHVSNKSA+LCGVMKTYRQK RA G A
Sbjct: 94 ERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRASQQGVAA--- 150
Query: 405 TVXVKGPD 428
VKGPD
Sbjct: 151 PATVKGPD 158
>BT003653-1|AAO39657.1| 626|Drosophila melanogaster AT01548p
protein.
Length = 626
Score = 139 bits (336), Expect = 2e-33
Identities = 70/88 (79%), Positives = 73/88 (82%)
Frame = +3
Query: 165 VAAKLDXIYKTGKLAHAELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGV 344
VA KLD IYKTGKLAHAELDERALDALKEFP DGAL+VLGQFL+SNLEHVSNKSA+LCGV
Sbjct: 1 VAGKLDEIYKTGKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGV 60
Query: 345 MKTYRQKXRAGVPGAPALTPTVXVKGPD 428
MKTYRQK RA G A VKGPD
Sbjct: 61 MKTYRQKSRASQQGVAA---PATVKGPD 85
>BT022147-1|AAY51542.1| 236|Drosophila melanogaster IP01435p
protein.
Length = 236
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 339 HTKKHFYWIHVRDLNLKIVQEHLKHRRMEILLRH--LEHARPTLRALAFQSYKCXR 178
H K H W+H R+ K +Q + ++ L RH + +RP LR SYKC R
Sbjct: 167 HLKCHM-WVHAREKPYKCLQCSQSYAQIRGLRRHERVHSSRPELR-----SYKCSR 216
>AE014298-1853|AAF48233.1| 232|Drosophila melanogaster CG4318-PA
protein.
Length = 232
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 339 HTKKHFYWIHVRDLNLKIVQEHLKHRRMEILLRH--LEHARPTLRALAFQSYKCXR 178
H K H W+H R+ K +Q + ++ L RH + +RP LR SYKC R
Sbjct: 163 HLKCHM-WVHAREKPYKCLQCSQSYAQIRGLRRHERVHSSRPELR-----SYKCSR 212
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,753,958
Number of Sequences: 53049
Number of extensions: 369471
Number of successful extensions: 991
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -