Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4c08
         (432 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical ...    58   4e-09
Z93384-1|CAB07633.3|  342|Caenorhabditis elegans Hypothetical pr...    31   0.36 
Z81035-3|CAB02732.1|  333|Caenorhabditis elegans Hypothetical pr...    30   0.82 
Z97628-3|CAB10727.1|  819|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z79755-13|CAB02114.1|  819|Caenorhabditis elegans Hypothetical p...    29   1.9  
Z83104-5|CAC35810.1|  570|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z46828-6|CAA86855.1| 1249|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z11576-1|CAA77663.1|  625|Caenorhabditis elegans aromatic-L-amin...    28   3.3  
AB012700-1|BAA89795.1|  570|Caenorhabditis elegans FLR-4 protein.      28   3.3  
AC084197-21|ABN43081.1|  172|Caenorhabditis elegans Hypothetical...    27   4.4  
Z83108-3|CAB05511.1|  457|Caenorhabditis elegans Hypothetical pr...    27   5.8  
AF039050-10|AAC47933.2|  362|Caenorhabditis elegans Seven tm rec...    27   5.8  

>AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical
           protein F58D5.1 protein.
          Length = 611

 Score = 57.6 bits (133), Expect = 4e-09
 Identities = 32/108 (29%), Positives = 58/108 (53%)
 Frame = +3

Query: 105 SDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELDERALDALKEFPSDGALSVLG 284
           S    TE+Y KLI   + P +A  +  IY++G L   +LD+RA+D +     D A  +  
Sbjct: 52  SKYAETENYKKLIGLKMKPALADVVCEIYESGLLGPEDLDDRAVDIINSVNLDQAKFIFT 111

Query: 285 QFLDSNLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTPTVXVKGPD 428
           +  +S L  V+ KS ++  ++++++ + R    GA A+T    + GP+
Sbjct: 112 EIKNSELFGVATKSLYVTSLIRSFKDRCRQ--QGAAAVTSGKLINGPE 157


>Z93384-1|CAB07633.3|  342|Caenorhabditis elegans Hypothetical
           protein H08M01.1 protein.
          Length = 342

 Score = 31.1 bits (67), Expect = 0.36
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 224 RACSRCLKRISIRRCFKCSWTIFR 295
           + C +CLK I   +CF+  WT+FR
Sbjct: 286 KVCPKCLKMIGCAKCFRW-WTVFR 308


>Z81035-3|CAB02732.1|  333|Caenorhabditis elegans Hypothetical
           protein C15H11.4 protein.
          Length = 333

 Score = 29.9 bits (64), Expect = 0.82
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +3

Query: 300 NLEHVSNKSAFLCGVMKTYRQKXRAGVPGAPALTPTVXVKGPD 428
           NL  V +K +F  G+MK+YRQ   A V  A ALT  +   G +
Sbjct: 194 NLATVDDKKSF--GMMKSYRQSKLANVMHARALTKELRKDGAE 234


>Z97628-3|CAB10727.1|  819|Caenorhabditis elegans Hypothetical
           protein F43G9.12 protein.
          Length = 819

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
 Frame = +3

Query: 75  ISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELD----ERALDA 242
           +S+D   G DS     +D  K+ E     K+  + + +YK  K+    LD    +  L  
Sbjct: 45  MSFDADEGADSTFKLKKDKKKVEELKRQHKLEEEAEKLYKEEKIRKEALDKIVKKEKLSK 104

Query: 243 LKEFPSDGALSVLGQFLDSNLEHVSNKSAF 332
             +   +     L ++ D + +H+SN  ++
Sbjct: 105 EDKKTKNERHKYLDKYRDKSAKHISNSESY 134


>Z79755-13|CAB02114.1|  819|Caenorhabditis elegans Hypothetical
           protein F43G9.12 protein.
          Length = 819

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
 Frame = +3

Query: 75  ISYDEVAGKDSDVGRTEDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAELD----ERALDA 242
           +S+D   G DS     +D  K+ E     K+  + + +YK  K+    LD    +  L  
Sbjct: 45  MSFDADEGADSTFKLKKDKKKVEELKRQHKLEEEAEKLYKEEKIRKEALDKIVKKEKLSK 104

Query: 243 LKEFPSDGALSVLGQFLDSNLEHVSNKSAF 332
             +   +     L ++ D + +H+SN  ++
Sbjct: 105 EDKKTKNERHKYLDKYRDKSAKHISNSESY 134


>Z83104-5|CAC35810.1|  570|Caenorhabditis elegans Hypothetical
           protein F09B12.6 protein.
          Length = 570

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = -2

Query: 218 LCVR*LSSLINVVELGGYLRIQAILNKFV--VIFCPANIRIL-PSYLIIGYFSIALRHSL 48
           +C   L   + +  LG +L I   + +FV  +I    N  ++ P YLII    I L  +L
Sbjct: 425 ICYLLLFLSLGITALGSFLLISYFVVRFVRYLIAINCNCDLMQPQYLIISGILIVLMFAL 484

Query: 47  FYNFC 33
            ++ C
Sbjct: 485 LFSCC 489


>Z46828-6|CAA86855.1| 1249|Caenorhabditis elegans Hypothetical
           protein R03D7.1 protein.
          Length = 1249

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = +3

Query: 216 ELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVM-KTYRQKXRAGVPGAP 392
           E  E   D L+EF  DG ++++G    +  +H++     + G+  +   Q   AG     
Sbjct: 288 ETPEEMADVLREFARDGLVNIIGGCCGTTPDHINAMYKAVQGITPRVPPQDPHAGKMLLS 347

Query: 393 ALTPTVXVKGPD 428
            L P++   GP+
Sbjct: 348 GLEPSIV--GPE 357


>Z11576-1|CAA77663.1|  625|Caenorhabditis elegans aromatic-L-amino
           acid  decarboxylaseprotein.
          Length = 625

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +3

Query: 123 EDYHKLIEYGLDPKVAAKLDXIYKTGKLAHAEL 221
           EDYHKLI  GL    ++K   I   G   H  L
Sbjct: 120 EDYHKLIVPGLSHSSSSKFSFILPAGNSFHCLL 152


>AB012700-1|BAA89795.1|  570|Caenorhabditis elegans FLR-4 protein.
          Length = 570

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = -2

Query: 218 LCVR*LSSLINVVELGGYLRIQAILNKFV--VIFCPANIRIL-PSYLIIGYFSIALRHSL 48
           +C   L   + +  LG +L I   + +FV  +I    N  ++ P YLII    I L  +L
Sbjct: 425 ICYLLLFLSLGITALGSFLLISYFVVRFVRYLIAINCNCDLMQPQYLIISGILIVLMFAL 484

Query: 47  FYNFC 33
            ++ C
Sbjct: 485 LFSCC 489


>AC084197-21|ABN43081.1|  172|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.47 protein.
          Length = 172

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = -1

Query: 138 VCGNLLSGQHQNPSQLPHHRIFL 70
           VC   L  QH NP QLP   IFL
Sbjct: 141 VCARDLCNQHSNPFQLPVILIFL 163


>Z83108-3|CAB05511.1|  457|Caenorhabditis elegans Hypothetical
           protein F44E5.3 protein.
          Length = 457

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 294 LKIVQEHLKHRRMEILLRHLEHARPTL 214
           LKIV+++LKH +    LR L+ +R TL
Sbjct: 241 LKIVEQYLKHEKPLQKLRFLDCSRTTL 267


>AF039050-10|AAC47933.2|  362|Caenorhabditis elegans Seven tm
           receptor protein 82 protein.
          Length = 362

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 179 ELGGYLRIQAILNKFVVIFCPANIRILPSYLIIGY 75
           E G Y  +  ++     I+    + ILPSYL+  Y
Sbjct: 37  EYGSYKLLMMVMATLYAIYSAIEVIILPSYLVFEY 71


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,630,377
Number of Sequences: 27780
Number of extensions: 192727
Number of successful extensions: 527
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)