Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4c04
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   1.7  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   5.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.3  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 212 VYCCDTRPKTPLRRSSCCDSKEF 280
           VYCCD      LR+   C  K++
Sbjct: 160 VYCCDNNFNVFLRQVFTCRCKDY 182


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 582 EGIHRVAVSTLLLNLCGDYIQKSLR 656
           EG   V       N+C  Y+ KSLR
Sbjct: 445 EGFEMVIAEPEYTNICFWYVPKSLR 469


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 450 DTKTAVLNDTFLLVTVGFLGPRTDEMECRIKYTAT 554
           D + A+ N  FLL+T+G L      M+  ++   T
Sbjct: 665 DIEIALCNGIFLLLTLGSLLQMVISMDSTVEEAKT 699


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 125 PVLVTSSYPTRCEESPT 175
           P   T S PT+  E PT
Sbjct: 403 PTQTTESEPTQASEQPT 419


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 340 APLSFGFNPQALFKLLSNLLSAYLP 414
           AP     N  + F  LSNL + Y P
Sbjct: 494 APTGENSNSSSDFNFLSNLANDYTP 518


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 340 APLSFGFNPQALFKLLSNLLSAYLP 414
           AP     N  + F  LSNL + Y P
Sbjct: 442 APTGENSNSSSDFNFLSNLANDYTP 466


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,306
Number of Sequences: 336
Number of extensions: 3366
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)