Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4c04
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    27   0.72 
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    26   1.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   2.9  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    24   3.8  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   6.7  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   8.9  

>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 26.6 bits (56), Expect = 0.72
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 194 HCPQSMVYCCDTRPKTPLRRSSCCDSKE 277
           +CP++   C +T P T  RR + C   E
Sbjct: 77  YCPRTRSACAETFPSTRRRRGALCMHSE 104


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
 Frame = +2

Query: 149 PTRC----EESPTCYPCLPHCPQS-MVYCCDTRPKTPLRRSSCCDSKE 277
           P RC     + P  +P  P   QS + YCC T P  P   S+ C  +E
Sbjct: 9   PFRCPLFFSKHPKQFP--PSKKQSELPYCCQTEPLIPEHVSTKCKERE 54


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +1

Query: 361 NPQALFKLLSNLLSAYLPTSQDKICHTV 444
           NP+ + + + NL++   P S+DK+ +T+
Sbjct: 657 NPKQIEEAVMNLITNLQPDSEDKLLNTM 684


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
 Frame = +3

Query: 588 IHRVAVSTLLLN----LCGDYIQKSLRKLILLKR 677
           IH +  S  ++N    LCG+YI+  L++  LL R
Sbjct: 55  IHHLTTSQDVINQGKCLCGEYIRARLKRSGLLNR 88


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 535 LHSISSVRGPRKPTVTSRNVSFNTAVFVSITRYDIF 428
           +H I+S +  R P    R      A  +SI + DIF
Sbjct: 11  IHGIASCKRHRDPNAIQRVAREGLAKGISIKKCDIF 46


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 573 SVLEGIHRVAVSTLLLNLCGDYIQKSLRKLI 665
           S+ + +    V + LLN+ G Y ++  RKLI
Sbjct: 596 SIADALRNKGVPSALLNIIGSYFEE--RKLI 624


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,811
Number of Sequences: 2352
Number of extensions: 14795
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)