Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4c03
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.8  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   3.1  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   4.1  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   4.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.2  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   7.2  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   9.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.6  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 690 CXQCGVSCEDRV 655
           C  CGV C D+V
Sbjct: 501 CNMCGVECSDKV 512


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 135 WCANRQRVLGAVLSRTWHPTRRAD 206
           W AN +R L      TW P  + D
Sbjct: 134 WFANARRRLKKENKMTWEPKNKTD 157


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 276 TGSCFAEECVEGIVSAADGFV 214
           T + FA  C++G+VSA +  V
Sbjct: 4   TSALFAFICIQGLVSAEEYLV 24


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 584 P*STERRSIRSDAKPDPVPPPNE 516
           P   E+ S+     P P PPP E
Sbjct: 85  PILAEKVSVSPTTPPTPSPPPEE 107


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 157 CWELYCLEHGIQPDGQMPSDKT 222
           CW  Y +   +Q  GQ+P  +T
Sbjct: 263 CWSPYIIFDLLQVFGQIPGTQT 284


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 181 HGIQPDGQMPSDKTV 225
           HGIQP   +PS + V
Sbjct: 169 HGIQPSPTLPSKEEV 183


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 554 SLWNVSPSIMVRNPNLNSRYIRHHK 628
           ++W   PS +V   N++  Y++H +
Sbjct: 313 TMWLKDPSWLVNAFNVDPLYLKHEQ 337


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 542 VLHHSLWNVSP 574
           + HH  WN SP
Sbjct: 70  IRHHGQWNYSP 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,073
Number of Sequences: 336
Number of extensions: 3564
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)