Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4c01
         (314 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111517-1|AAI11518.1|  213|Homo sapiens NDUFS7 protein protein.       32   0.41 
BC005954-1|AAH05954.1|  213|Homo sapiens NADH dehydrogenase (ubi...    32   0.41 
BC001715-1|AAH01715.2|  208|Homo sapiens NDUFS7 protein protein.       32   0.41 
AK222738-1|BAD96458.1|  213|Homo sapiens NADH-ubiquinone oxidore...    32   0.41 
AF115969-1|AAP97240.1|  213|Homo sapiens NADH:ubiquinone oxidore...    32   0.41 
AF060512-1|AAG43130.1|  214|Homo sapiens My017 protein protein.        32   0.41 
AC005329-1|AAC27669.1|  158|Homo sapiens NUKM_HUMAN, partial CDS...    32   0.41 

>BC111517-1|AAI11518.1|  213|Homo sapiens NDUFS7 protein protein.
          Length = 213

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 14  YGVLXLQKXIXRMKTIQVWYR 76
           YG+L LQ+ I R + +Q+WYR
Sbjct: 192 YGILQLQRKIKRERRLQIWYR 212


>BC005954-1|AAH05954.1|  213|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q
           reductas protein.
          Length = 213

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 14  YGVLXLQKXIXRMKTIQVWYR 76
           YG+L LQ+ I R + +Q+WYR
Sbjct: 192 YGILQLQRKIKRERRLQIWYR 212


>BC001715-1|AAH01715.2|  208|Homo sapiens NDUFS7 protein protein.
          Length = 208

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 14  YGVLXLQKXIXRMKTIQVWYR 76
           YG+L LQ+ I R + +Q+WYR
Sbjct: 187 YGILQLQRKIKRERRLQIWYR 207


>AK222738-1|BAD96458.1|  213|Homo sapiens NADH-ubiquinone
           oxidoreductase Fe-S protein 7 variant protein.
          Length = 213

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 14  YGVLXLQKXIXRMKTIQVWYR 76
           YG+L LQ+ I R + +Q+WYR
Sbjct: 192 YGILQLQRKIKRERRLQIWYR 212


>AF115969-1|AAP97240.1|  213|Homo sapiens NADH:ubiquinone
           oxidoreductase PSST subunit protein.
          Length = 213

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 14  YGVLXLQKXIXRMKTIQVWYR 76
           YG+L LQ+ I R + +Q+WYR
Sbjct: 192 YGILQLQRKIKRERRLQIWYR 212


>AF060512-1|AAG43130.1|  214|Homo sapiens My017 protein protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 14  YGVLXLQKXIXRMKTIQVWYR 76
           YG+L LQ+ I R + +Q+WYR
Sbjct: 193 YGILQLQRKIKRERRLQIWYR 213


>AC005329-1|AAC27669.1|  158|Homo sapiens NUKM_HUMAN, partial CDS
           protein.
          Length = 158

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 14  YGVLXLQKXIXRMKTIQVWYR 76
           YG+L LQ+ I R + +Q+WYR
Sbjct: 137 YGILQLQRKIKRERRLQIWYR 157


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,573,599
Number of Sequences: 237096
Number of extensions: 236011
Number of successful extensions: 230
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)