Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4b24
(721 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HQ04 Cluster: Transcription elongation factor B polyp... 260 2e-68
UniRef50_Q15369 Cluster: Transcription elongation factor B polyp... 224 1e-57
UniRef50_Q54Q05 Cluster: Putative uncharacterized protein; n=1; ... 107 3e-22
UniRef50_Q6CHY2 Cluster: Yarrowia lipolytica chromosome A of str... 100 3e-20
UniRef50_Q23153 Cluster: Elongin c protein 2; n=1; Caenorhabditi... 100 7e-20
UniRef50_A7NYR5 Cluster: Chromosome chr6 scaffold_3, whole genom... 96 7e-19
UniRef50_Q9FIG0 Cluster: Similarity to elongin C; n=1; Arabidops... 90 4e-17
UniRef50_Q9USX9 Cluster: Elongin C; n=1; Schizosaccharomyces pom... 87 4e-16
UniRef50_UPI0000DD8724 Cluster: PREDICTED: similar to transcript... 85 2e-15
UniRef50_A2EBN3 Cluster: Skp1 family, tetramerisation domain con... 81 3e-14
UniRef50_Q03071 Cluster: Elongin-C; n=2; Saccharomyces cerevisia... 75 2e-12
UniRef50_Q751F9 Cluster: Elongin-C; n=3; Saccharomycetales|Rep: ... 69 9e-11
UniRef50_A4S5I3 Cluster: Predicted protein; n=2; Ostreococcus|Re... 68 3e-10
UniRef50_Q0ULV2 Cluster: Predicted protein; n=4; Pezizomycotina|... 65 2e-09
UniRef50_Q5KPL1 Cluster: Transcriptional elongation regulator, p... 64 3e-09
UniRef50_Q8X0M3 Cluster: Related to Elongin C transcription elon... 59 9e-08
UniRef50_A3LXC0 Cluster: Predicted protein; n=5; Saccharomycetal... 57 4e-07
UniRef50_Q384S2 Cluster: Putative uncharacterized protein; n=3; ... 55 2e-06
UniRef50_Q4PFY4 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_A5AR54 Cluster: Putative uncharacterized protein; n=1; ... 39 0.11
UniRef50_Q8SR93 Cluster: GENERAL TRANSCRIPTION FACTOR; n=1; Ence... 37 0.44
UniRef50_P63208 Cluster: S-phase kinase-associated protein 1A; n... 36 0.76
UniRef50_Q384S1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_Q124Y4 Cluster: Aldose 1-epimerase; n=2; Comamonadaceae... 34 4.1
UniRef50_A7P960 Cluster: Chromosome chr3 scaffold_8, whole genom... 33 7.1
UniRef50_A5B7M5 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_Q0UNB9 Cluster: Predicted protein; n=1; Phaeosphaeria n... 33 7.1
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 33 9.4
UniRef50_Q5KN20 Cluster: Transporter, putative; n=2; Filobasidie... 33 9.4
UniRef50_A4RNF8 Cluster: Predicted protein; n=2; Magnaporthe gri... 33 9.4
>UniRef50_Q1HQ04 Cluster: Transcription elongation factor B
polypeptide 1; n=4; Coelomata|Rep: Transcription
elongation factor B polypeptide 1 - Bombyx mori (Silk
moth)
Length = 134
Score = 260 bits (637), Expect = 2e-68
Identities = 124/134 (92%), Positives = 124/134 (92%)
Frame = +3
Query: 165 MSEQPSVTNVADEQHXXXXXXXXXXEEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALI 344
MSEQPSVTNVADEQH EEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALI
Sbjct: 1 MSEQPSVTNVADEQHSASGSGSIGGEEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALI 60
Query: 345 SGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPE 524
SGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPE
Sbjct: 61 SGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPE 120
Query: 525 IALEVLMAANFLDC 566
IALEVLMAANFLDC
Sbjct: 121 IALEVLMAANFLDC 134
>UniRef50_Q15369 Cluster: Transcription elongation factor B
polypeptide 1; n=48; Bilateria|Rep: Transcription
elongation factor B polypeptide 1 - Homo sapiens (Human)
Length = 112
Score = 224 bits (548), Expect = 1e-57
Identities = 103/109 (94%), Positives = 105/109 (96%)
Frame = +3
Query: 240 EEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFR 419
EEK YGGCEGPDAMYVKL+SSDGHEFIVKREHAL SGTIKAMLSGPGQFAENE NEVNFR
Sbjct: 4 EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63
Query: 420 EIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 566
EIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 64 EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>UniRef50_Q54Q05 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 109
Score = 107 bits (257), Expect = 3e-22
Identities = 48/94 (51%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Frame = +3
Query: 285 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQ-FAENEANEVNFREIPSHVLQKVCMYF 461
++L SS GHEF++ R+ + +SGTIK+MLSG F E++ NE+ FREI + VL+KV YF
Sbjct: 15 LRLYSSTGHEFVLSRKMSYVSGTIKSMLSGDNSNFMEDQNNEIRFREISTPVLEKVIQYF 74
Query: 462 TYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLD 563
+K +YTNS+T++PEFPI ++ +++L+AA+FLD
Sbjct: 75 YFKNKYTNSTTDLPEFPINEKVVVDLLLAAHFLD 108
>UniRef50_Q6CHY2 Cluster: Yarrowia lipolytica chromosome A of strain
CLIB122 of Yarrowia lipolytica; n=2;
Saccharomycetales|Rep: Yarrowia lipolytica chromosome A
of strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 105
Score = 100 bits (240), Expect = 3e-20
Identities = 45/100 (45%), Positives = 67/100 (67%)
Frame = +3
Query: 264 EGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQ 443
E P YV L+SSDGHEF + +E A +S +K M+ G G F E N++ ++IP V +
Sbjct: 5 EQPQEGYVGLISSDGHEFWITKEAACVSKVLKPMVQGDGHFRETLDNKIPLQDIPHDVAE 64
Query: 444 KVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLD 563
K+C Y Y ++Y + ++IPEF I PE+ALE+L+AA++LD
Sbjct: 65 KLCEYLYYSLKYKDQVSDIPEFEIPPEMALELLVAADYLD 104
>UniRef50_Q23153 Cluster: Elongin c protein 2; n=1; Caenorhabditis
elegans|Rep: Elongin c protein 2 - Caenorhabditis
elegans
Length = 163
Score = 99.5 bits (237), Expect = 7e-20
Identities = 48/103 (46%), Positives = 66/103 (64%)
Frame = +3
Query: 258 GCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHV 437
G EGP + YVKLVS+D HEFI+KRE A+ S +++ + + P N V F + SH+
Sbjct: 62 GLEGPRSKYVKLVSNDDHEFIIKREVAMTSKSLRELFANPTVDLAAANNTVYFSDFQSHI 121
Query: 438 LQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 566
LQKVC Y YK +Y +S P F I P+IA+++L AAN L+C
Sbjct: 122 LQKVCHYLAYKTKYRHSRV-APPFDIPPDIAMDLLAAANELEC 163
>UniRef50_A7NYR5 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
chr6 scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 98
Score = 96.3 bits (229), Expect = 7e-19
Identities = 43/92 (46%), Positives = 67/92 (72%)
Frame = +3
Query: 285 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYFT 464
VKL+S++G EF++ + A++S TI+ ML+ PG FAE E EV F EI + +L+K+C YF
Sbjct: 7 VKLISAEGFEFVIDKRAAMVSQTIRNMLTSPGSFAEREHGEVTFPEISTTILEKICQYFY 66
Query: 465 YKVRYTNSSTEIPEFPIAPEIALEVLMAANFL 560
+ +++ +S + EFPI PE+ LE++MAAN+L
Sbjct: 67 WSLQF--ASGKDTEFPIEPELTLELMMAANYL 96
>UniRef50_Q9FIG0 Cluster: Similarity to elongin C; n=1; Arabidopsis
thaliana|Rep: Similarity to elongin C - Arabidopsis
thaliana (Mouse-ear cress)
Length = 96
Score = 90.2 bits (214), Expect = 4e-17
Identities = 40/92 (43%), Positives = 65/92 (70%)
Frame = +3
Query: 285 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYFT 464
VKL+S +G EF++ RE A++S TI++ML+ PG F+E++ V F +I + +L+K+C YF
Sbjct: 5 VKLISMEGFEFVIDREAAMVSQTIRSMLTSPGGFSESKDGVVTFPDISTTILEKICQYFY 64
Query: 465 YKVRYTNSSTEIPEFPIAPEIALEVLMAANFL 560
+ ++Y+ EF I PE+ LE++MAAN+L
Sbjct: 65 WSLQYSRGKE--TEFHIEPELTLELMMAANYL 94
>UniRef50_Q9USX9 Cluster: Elongin C; n=1; Schizosaccharomyces
pombe|Rep: Elongin C - Schizosaccharomyces pombe
(Fission yeast)
Length = 97
Score = 87.0 bits (206), Expect = 4e-16
Identities = 43/94 (45%), Positives = 65/94 (69%)
Frame = +3
Query: 282 YVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYF 461
YV+L+S DG FI+++E A +SGTI+A+L+ G F+E + NE F +I + +L+KVC Y
Sbjct: 5 YVRLISGDGFVFILEKEIACLSGTIRAILN-EGIFSEAQKNECTFPDIRATLLEKVCEYL 63
Query: 462 TYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLD 563
Y RY N +IP+F I PE+ LE+L+ A +L+
Sbjct: 64 HYNYRYKN-QLDIPKFDIPPEMVLELLVTAEYLE 96
>UniRef50_UPI0000DD8724 Cluster: PREDICTED: similar to transcription
elongation factor B (SIII), polypeptide 1; n=1; Homo
sapiens|Rep: PREDICTED: similar to transcription
elongation factor B (SIII), polypeptide 1 - Homo sapiens
Length = 101
Score = 84.6 bits (200), Expect = 2e-15
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +3
Query: 240 EEKVYGGCEGPDAMYVK--LVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVN 413
EEK Y CE + M L+S EF+VK A S T+K +L+GP FAE EVN
Sbjct: 4 EEKTYSVCESSNTMMSNGYLLSP---EFLVKIRTAQTSATMKPLLTGPDHFAEKGTIEVN 60
Query: 414 FREIPSHVLQKVCMYFTYKVRYTNSSTEIPEFP 512
R+ PS VL K C YFTY YT SSTEIP+FP
Sbjct: 61 LRDNPSQVLPKACKYFTYIFHYTYSSTEIPKFP 93
>UniRef50_A2EBN3 Cluster: Skp1 family, tetramerisation domain
containing protein; n=1; Trichomonas vaginalis G3|Rep:
Skp1 family, tetramerisation domain containing protein -
Trichomonas vaginalis G3
Length = 136
Score = 81.0 bits (191), Expect = 3e-14
Identities = 35/93 (37%), Positives = 63/93 (67%)
Frame = +3
Query: 282 YVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYF 461
++KL+S+DG+ FIV ++ A+IS TI+ ML G G F E ++ + +I S VL+++ Y+
Sbjct: 42 FLKLMSNDGYVFIVDKKTAMISQTIRNMLYGGGNFEEAQSKTIRLNDIRSEVLERIIEYW 101
Query: 462 TYKVRYTNSSTEIPEFPIAPEIALEVLMAANFL 560
Y+ +Y++ + ++P F I P +A+E+L A +L
Sbjct: 102 HYRTQYSDHTDQLPPFDIDPNLAIELLNCAEYL 134
>UniRef50_Q03071 Cluster: Elongin-C; n=2; Saccharomyces
cerevisiae|Rep: Elongin-C - Saccharomyces cerevisiae
(Baker's yeast)
Length = 99
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Frame = +3
Query: 282 YVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYF 461
+V LVS D E+ + R A+IS T+KAM+ GP F E++ + ++ SH+L+K Y
Sbjct: 5 FVTLVSKDDKEYEISRSAAMISPTLKAMIEGP--FRESK-GRIELKQFDSHILEKAVEYL 61
Query: 462 TYKVRYTNSS---TEIPEFPIAPEIALEVLMAANFL 560
Y ++Y+ S EIPEF I E++LE+L+AA++L
Sbjct: 62 NYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYL 97
>UniRef50_Q751F9 Cluster: Elongin-C; n=3; Saccharomycetales|Rep:
Elongin-C - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 100
Score = 69.3 bits (162), Expect = 9e-11
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Frame = +3
Query: 282 YVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYF 461
+V LVSSDG F V RE A++S T+ ML FAE + +V I S +L KV Y
Sbjct: 6 HVTLVSSDGKSFEVPRERAMLSPTLAKMLDS--SFAEAKEAKVTLPTIESSMLAKVVEYL 63
Query: 462 TY--KVRYTNSSTEIPEFPIAPEIALEVLMAANFL 560
Y + ++ + +IP+F + PEI+LE+L+AA++L
Sbjct: 64 EYLEEYKHKDDGEDIPQFEVPPEISLELLLAADYL 98
>UniRef50_A4S5I3 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 108
Score = 67.7 bits (158), Expect = 3e-10
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +3
Query: 285 VKLVSSDGHEFIVKREHALISGTIKAML--SGPGQFAENEANEVNFREIPSHVLQKVCMY 458
+ LVSS G EF+V+ + SG +K + S F E + V R+I + +L+K+ Y
Sbjct: 13 ITLVSSQGDEFVVEYDLLRASGVLKRLFASSEAADFEEQRSKVVKLRDISTAILRKIIDY 72
Query: 459 FTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLD 563
YK + +SS P F I E A+E+LMAANFLD
Sbjct: 73 CEYKRAHEHSSKAPPRFQIDEEDAIELLMAANFLD 107
>UniRef50_Q0ULV2 Cluster: Predicted protein; n=4;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 135
Score = 64.9 bits (151), Expect = 2e-09
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 18/118 (15%)
Frame = +3
Query: 282 YVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVN-------FREIP---- 428
YV LVS+DG+EF + R A I+GTIK L F EN N ++ F +P
Sbjct: 9 YVTLVSTDGYEFKILRSAACIAGTIKKALDPLSGFRENTQNRIDLPTIKYEFPALPRTAH 68
Query: 429 SH-------VLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC*TMNS 581
SH VL+KVC Y Y ++ S ++ + I PE+ LE+L+AA++LD T S
Sbjct: 69 SHTDATIGVVLEKVCEYLYYNQKHAESK-DVSDMDIPPELCLELLIAADYLDANTDGS 125
>UniRef50_Q5KPL1 Cluster: Transcriptional elongation regulator,
putative; n=1; Filobasidiella neoformans|Rep:
Transcriptional elongation regulator, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 113
Score = 64.1 bits (149), Expect = 3e-09
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Frame = +3
Query: 270 PDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKV 449
P+ YV L S+DG+ F+V R+ A SG +K+ML F E++ ++ +L KV
Sbjct: 12 PEDDYVLLESADGYTFVVSRKIACASGMLKSMLDEDAAFEESKNKTCRIQQ-RGVILAKV 70
Query: 450 CMYFTYKVRYTNS-STEIPE-FP--IAPEIALEVLMAANFLDC 566
Y YKV+++ + E+ E F I P IALE+L AA+FLDC
Sbjct: 71 IEYLAYKVQWSECLAEEVNEDFSDRIDPYIALELLTAADFLDC 113
>UniRef50_Q8X0M3 Cluster: Related to Elongin C transcription
elongation factor; n=10; Pezizomycotina|Rep: Related to
Elongin C transcription elongation factor - Neurospora
crassa
Length = 109
Score = 59.3 bits (137), Expect = 9e-08
Identities = 34/98 (34%), Positives = 52/98 (53%)
Frame = +3
Query: 267 GPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQK 446
G + Y+ LVS DG EF+V RE L S I+ ML E ++I +L+K
Sbjct: 8 GGASKYITLVSKDGFEFVVLREATLCSDYIRGMLR--NNMTEARTGRCELQDINGVILEK 65
Query: 447 VCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFL 560
V YF Y +Y + ++P+ I E LE+++AA++L
Sbjct: 66 VVEYFHYWYKYRDRE-DVPDMEIPVENCLELVVAADYL 102
>UniRef50_A3LXC0 Cluster: Predicted protein; n=5;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 98
Score = 57.2 bits (132), Expect = 4e-07
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Frame = +3
Query: 282 YVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVC--M 455
YV LVS+D H+F+V +E A IS +++ F E + +++ ++ +L+ V +
Sbjct: 7 YVTLVSADNHKFVVLKEVASISSVLRSTQG----FEEGKTGKISL-DMDGDILECVVEYL 61
Query: 456 YFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLD 563
Y+ YK + S IPEF I +ALE+L+ A+FLD
Sbjct: 62 YYHYKYKEQAESGAIPEFHIPTHLALELLVKADFLD 97
>UniRef50_Q384S2 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 136
Score = 54.8 bits (126), Expect = 2e-06
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Frame = +3
Query: 282 YVKLVSSDGHEFIVKREHALISGTIKAMLSG---PG----QF----AENEANEVNFREIP 428
Y+ ++S+DGH+F++ R+ A S I+ L+ PG +F +NE + F + P
Sbjct: 31 YMSMLSADGHKFVLHRDCACASPLIRKALTNLVDPGVPEMRFDWANGDNEPPVIYFTKAP 90
Query: 429 SHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 566
+ +L+ V Y YK RY + P F + +IAL+++ A L C
Sbjct: 91 TALLEVVIKYLYYKHRYEGDTDYRPPFDVPRQIALDIMKLAQVLQC 136
>UniRef50_Q4PFY4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 180
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = +3
Query: 378 GQFAENEANEVNFREIPSHVLQKVCMYFTYKVRYTNSST-EIPEFP--IAPEIALEVLMA 548
G FAE E+N +I VL+KV Y +K +Y+ ++ ++P+F I PEIALE+LMA
Sbjct: 8 GGFAEAESNTARL-QIRGEVLEKVIEYLHFKTKYSGATNVDVPDFRNRIPPEIALELLMA 66
Query: 549 ANFLD 563
A+FL+
Sbjct: 67 ADFLE 71
>UniRef50_A5AR54 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 353
Score = 39.1 bits (87), Expect = 0.11
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +3
Query: 285 VKLVSSDGHEFIVKREHALISGTIKAMLSGPG 380
VKL+S++G EF++ + A++S TI+ ML+ PG
Sbjct: 7 VKLISAEGFEFVIDKRAAMVSQTIRNMLTSPG 38
>UniRef50_Q8SR93 Cluster: GENERAL TRANSCRIPTION FACTOR; n=1;
Encephalitozoon cuniculi|Rep: GENERAL TRANSCRIPTION
FACTOR - Encephalitozoon cuniculi
Length = 370
Score = 37.1 bits (82), Expect = 0.44
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 369 SGPGQFAENEANEVNFREIPSHVLQKVCMY 458
+G G+F EN+ EV+ R IP HV++++ MY
Sbjct: 328 NGAGEFVENDEIEVDMRTIPDHVVEEIDMY 357
>UniRef50_P63208 Cluster: S-phase kinase-associated protein 1A;
n=94; Eukaryota|Rep: S-phase kinase-associated protein
1A - Homo sapiens (Human)
Length = 163
Score = 36.3 bits (80), Expect = 0.76
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +3
Query: 285 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYFT 464
+KL SSDG F V E A S TIK ML G E + + V + + +L+KV + T
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 465 Y 467
+
Sbjct: 64 H 64
>UniRef50_Q384S1 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 212
Score = 35.5 bits (78), Expect = 1.3
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 261 CEGPDAMYVKLVSSDGHEFIVKREHALISGTIK-AMLSGPGQFAENEANEV 410
CE P M V L SSDGH F+V R A++SG ++ AM + F +N ++ V
Sbjct: 40 CE-PSYM-VCLESSDGHRFLVDRNCAMVSGVMRQAMRNKLSDFDDNNSSHV 88
>UniRef50_Q124Y4 Cluster: Aldose 1-epimerase; n=2;
Comamonadaceae|Rep: Aldose 1-epimerase - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 271
Score = 33.9 bits (74), Expect = 4.1
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -1
Query: 424 ISLKLTSLASFSANWPGPLSIALIVPDIRACSLFTMNSCPSEDTSFTYIASGPSHP 257
+SL++T+ + + W G L V D++ACS+ + P +D + + PS P
Sbjct: 122 LSLQVTNTGNDTFTWTGGLHPYFAVDDVQACSVVGLAGLPVQDHYDANLTTEPSSP 177
>UniRef50_A7P960 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=4; core eudicotyledons|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 634
Score = 33.1 bits (72), Expect = 7.1
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 397 KLTRSTLERYHHTYSKKSACTSRTRYAIPTRLQRYQSFRSLPRS 528
KL S++ R H + S++S C RT ++ T + S+ SLP S
Sbjct: 227 KLLDSSIHRSHSSLSQRSTCPIRTSPSMQTLAKAVDSYHSLPLS 270
>UniRef50_A5B7M5 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 646
Score = 33.1 bits (72), Expect = 7.1
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = -1
Query: 394 FSANWPGPLSIALIVPDIRACSLFTMNSCPSEDTSFTYIAS------GPSHPPYTFSSPP 233
F NW GP I + PD A + + SE T+ + S P ++ P
Sbjct: 301 FRPNWRGPYFIRELTPDDAAWLMDLDGNRFSESTNVDQLKSDFCRDESPDKDDFSGFDCP 360
Query: 232 ILPDPLAECC 203
I+ DPL +CC
Sbjct: 361 IIYDPLVDCC 370
>UniRef50_Q0UNB9 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 207
Score = 33.1 bits (72), Expect = 7.1
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 349 ALLRLCSADRASLLKMKLTRSTLERYHHTYSKKSACTSRTRYAIPTRLQRY---QSFRSL 519
A + CSA A+ + ++ +T YHH++++ S + T IP Q Y + R
Sbjct: 10 AAVMSCSAPAAAFVPKRVRWATEPNYHHSHNEASPAATSTPIDIPYPDQTYNMPKGSRMA 69
Query: 520 PRSPS 534
PR P+
Sbjct: 70 PRKPT 74
>UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1;
Toxoplasma gondii|Rep: Dead-box helicase, putative -
Toxoplasma gondii
Length = 822
Score = 32.7 bits (71), Expect = 9.4
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = -1
Query: 373 PLSIALIVPDIRACSLFTMNSCPSEDTSFTYIASGPSHPPYTFSSPPILPDPLAECCSS 197
P S + D R ++ ED S ++ PS Y + PP L DP E C S
Sbjct: 393 PFSFSSEADDTRQEETEDVDLPKPEDASKDTVSPSPSSGNYVLAGPPALVDPFVEFCES 451
>UniRef50_Q5KN20 Cluster: Transporter, putative; n=2; Filobasidiella
neoformans|Rep: Transporter, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 382
Score = 32.7 bits (71), Expect = 9.4
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = -1
Query: 442 WSTCDGISLKLTSLASFSANWPGPLSIALIVPDIRACSLFTMNSCPSEDTSFTYIASGPS 263
WS D SL +++ SA SIA ++ L S P ++S + +S PS
Sbjct: 211 WSEGDHSSLTPSTILICSAFSKMVASIATYPHEVLRTRLQIRKSSPKSNSSSSVFSSNPS 270
Query: 262 ---HPPYTFSSPPILPDPLAE 209
HPP FSS P P A+
Sbjct: 271 KPSHPPLPFSSMPFNYLPSAD 291
>UniRef50_A4RNF8 Cluster: Predicted protein; n=2; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 507
Score = 32.7 bits (71), Expect = 9.4
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +1
Query: 418 ERYHHTYSKKSACTSRTRYAIPTRLQRYQS 507
ER HHT S+KS+ T ++R A+P++ + Q+
Sbjct: 196 ERRHHTSSRKSSHTGKSRPAVPSQYEMLQA 225
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,564,803
Number of Sequences: 1657284
Number of extensions: 12597433
Number of successful extensions: 33230
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33198
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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