Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4b24
         (721 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.95 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.95 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   8.9  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 2/151 (1%)
 Frame = -3

Query: 662 SRPIYITNSSCDISVVYLSLH*GNVVVRIHRLTVEEVGSHQHFEGDLGSDRKLWYLCRRV 483
           +R + I  + C I+ V   +  GN  +    LTV        FE  L     ++ L  + 
Sbjct: 222 NRDLIIVQTGCTITRVIPQVCSGNCKLNDILLTVRP-HLELTFENILSHINTVYVLRTKK 280

Query: 482 GIAYLVREVHADFLEYV*W--YLSKVDLVSFIFSKLARSAEHSLNSA*YKSMLPLHNELM 309
           G+  +       +L       Y+ + DLV+F+      + +     + Y S +PLH+   
Sbjct: 281 GVMRVDASEEYSYLRLKGQMLYIPESDLVTFLCYPSVMNLDDLTRRSLYLSDIPLHDATR 340

Query: 308 SIRGYQFHIHSIWTFTSSIHLLFTTDTARST 216
            +        + +  T ++ LL  TD  + T
Sbjct: 341 DLVLMSEQFEADYKLTRNLELL--TDKLQQT 369


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 2/151 (1%)
 Frame = -3

Query: 662 SRPIYITNSSCDISVVYLSLH*GNVVVRIHRLTVEEVGSHQHFEGDLGSDRKLWYLCRRV 483
           +R + I  + C I+ V   +  GN  +    LTV        FE  L     ++ L  + 
Sbjct: 222 NRDLIIVQTGCTITRVIPQVCSGNCKLNDILLTVRP-HLELTFENILSHINTVYVLRTKK 280

Query: 482 GIAYLVREVHADFLEYV*W--YLSKVDLVSFIFSKLARSAEHSLNSA*YKSMLPLHNELM 309
           G+  +       +L       Y+ + DLV+F+      + +     + Y S +PLH+   
Sbjct: 281 GVMRVDASEEYSYLRLKGQMLYIPESDLVTFLCYPSVMNLDDLTRRSLYLSDIPLHDATR 340

Query: 308 SIRGYQFHIHSIWTFTSSIHLLFTTDTARST 216
            +        + +  T ++ LL  TD  + T
Sbjct: 341 DLVLMSEQFEADYKLTRNLELL--TDKLQQT 369


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -1

Query: 298 DTSFTYIASGPSHPPYTFSSPPILPDPLAECCSSATL 188
           D    YI  G + P     SP   P P  +C S+ T+
Sbjct: 725 DIIHNYIMRGEASP----RSPNASPSPAEQCASTTTI 757


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 316 NSCPSEDTSFTYIASGPSHPPYTFSSPP 233
           +SC     +   I S P HPP + +S P
Sbjct: 77  SSCDPVPGNLEQIGSRPLHPPASSTSLP 104


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 201 HQQH*LQKVARTFSTEGFLA 142
           HQQ  + +VAR   T G LA
Sbjct: 290 HQQSCINRVARETKTAGTLA 309


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,099
Number of Sequences: 438
Number of extensions: 3923
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)