Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4b22
         (494 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.0  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   4.6  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   6.1  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 422 DKQRTPRATHDNR 460
           D+ RTPR  HD R
Sbjct: 210 DESRTPRPKHDGR 222



 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 423 ISKGRHARHTITDYST 470
           I +  H RHT T ++T
Sbjct: 274 IQRRTHTRHTTTSHNT 289


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +3

Query: 186 TGHXXRNCPEGGRESATQTCYNCXK 260
           +G    NCP GG+ S      N  K
Sbjct: 19  SGCLITNCPRGGKRSKFAISENAVK 43


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 379 SLTINYVYYDATHGR 423
           ++  NY YY AT+ R
Sbjct: 59  AIDFNYYYYAATYAR 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,375
Number of Sequences: 336
Number of extensions: 2131
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)