Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4b22
(494 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 84 5e-17
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 72 3e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 72 3e-13
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 72 3e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 71 5e-13
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 71 5e-13
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 71 5e-13
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 61 4e-10
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 61 4e-10
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 43 1e-04
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 43 1e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 43 1e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 43 1e-04
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 41 6e-04
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 41 6e-04
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 41 6e-04
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 39 0.002
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 37 0.007
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 37 0.007
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.009
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.20
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 32 0.26
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.46
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 31 0.61
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 30 0.80
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 30 0.80
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 30 1.1
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 30 1.1
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 30 1.1
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 30 1.1
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 30 1.1
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 30 1.1
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 30 1.1
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 1.4
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 29 1.4
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 1.4
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 1.4
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 29 1.9
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 29 2.4
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 29 2.4
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 29 2.4
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 29 2.4
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 3.2
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 28 3.2
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 28 3.2
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 27 5.7
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 27 5.7
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 7.5
U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile (un... 27 7.5
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 7.5
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 27 9.9
CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical ... 27 9.9
AF039047-12|AAM15590.1| 226|Caenorhabditis elegans Hypothetical... 27 9.9
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 27 9.9
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 84.2 bits (199), Expect = 5e-17
Identities = 51/146 (34%), Positives = 63/146 (43%), Gaps = 40/146 (27%)
Frame = +3
Query: 42 CFXCNRTGHFARDCKEX-----------ADRCYXCNGTGHXARECAQSPDEP-------- 164
C+ C + GH +R+C CY C TGH +R+C +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGGG 65
Query: 165 --SCYNCNKTGHXXRNCP----EGG-----------RESATQTCYNCXKSGHISRNCPDG 293
SCYNC GH R+CP EGG R Q CYNC +SGHISR C +
Sbjct: 66 GGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTES 125
Query: 294 ----TKTCYVCGKPGHISRECDEARN 359
K CY C + GHISR+C N
Sbjct: 126 GSAEEKRCYQCQETGHISRDCPSQTN 151
Score = 76.6 bits (180), Expect = 9e-15
Identities = 45/132 (34%), Positives = 60/132 (45%), Gaps = 37/132 (28%)
Frame = +3
Query: 93 ADR-CYXCNGTGHXARECAQSPDE---------PSCYNCNKTGHXXRNCPEGGRESATQ- 239
+DR CY C GH +R C + +CYNC +TGH R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 240 ------TCYNCXKSGHISRNCPD--------------------GTKTCYVCGKPGHISRE 341
+CYNC GH SR+CP G + CY CG+ GHISRE
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRE 121
Query: 342 CDEARN*PQPPC 377
C E+ + + C
Sbjct: 122 CTESGSAEEKRC 133
Score = 49.2 bits (112), Expect = 2e-06
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Frame = +3
Query: 36 EKCFXCNRTGHFARDCKEXAD----RCYXCNGTGHXAREC 143
+KC+ C R+GH +R+C E RCY C TGH +R+C
Sbjct: 107 QKCYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDC 146
Score = 30.3 bits (65), Expect = 0.80
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 30 QREKCFXCNRTGHFARDC 83
+ ++C+ C TGH +RDC
Sbjct: 129 EEKRCYQCQETGHISRDC 146
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 71.7 bits (168), Expect = 3e-13
Identities = 42/126 (33%), Positives = 52/126 (41%), Gaps = 17/126 (13%)
Frame = +3
Query: 18 GFDRQREKCFXCNRTGHFARDC----KEXADR-CYXCNGTGHXARECAQS--PDEPSC-- 170
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 171 --------YNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDGTKTCYVCGKPG 326
N G GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 327 HISREC 344
H S EC
Sbjct: 272 HRSNEC 277
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 216 GGRESATQTCYNCXKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 356
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 44.0 bits (99), Expect = 6e-05
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 17/109 (15%)
Frame = +3
Query: 24 DRQREKCFXCNRTGHFARDCKEX------------ADRCYXCNGT-----GHXARECAQS 152
+R+ C+ C + GH +R+C E + NG G +
Sbjct: 179 EREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEE 238
Query: 153 PDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 299
C+NC GH CPE R C+NC + GH S CP+ K
Sbjct: 239 RGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 18 GFDRQREKCFXCNRTGHFARDCKEXADRCYXCNGTGHXARECAQSPDEP 164
G +R KCF C GH + +C E C+ C GH + EC +P +P
Sbjct: 236 GEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 303 CYVCGKPGHISRECDEARN*PQP 371
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 71.7 bits (168), Expect = 3e-13
Identities = 42/126 (33%), Positives = 52/126 (41%), Gaps = 17/126 (13%)
Frame = +3
Query: 18 GFDRQREKCFXCNRTGHFARDC----KEXADR-CYXCNGTGHXARECAQS--PDEPSC-- 170
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 171 --------YNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDGTKTCYVCGKPG 326
N G GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 327 HISREC 344
H S EC
Sbjct: 272 HRSNEC 277
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 216 GGRESATQTCYNCXKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 356
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 44.0 bits (99), Expect = 6e-05
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 17/109 (15%)
Frame = +3
Query: 24 DRQREKCFXCNRTGHFARDCKEX------------ADRCYXCNGT-----GHXARECAQS 152
+R+ C+ C + GH +R+C E + NG G +
Sbjct: 179 EREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEE 238
Query: 153 PDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 299
C+NC GH CPE R C+NC + GH S CP+ K
Sbjct: 239 RGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 18 GFDRQREKCFXCNRTGHFARDCKEXADRCYXCNGTGHXARECAQSPDEP 164
G +R KCF C GH + +C E C+ C GH + EC +P +P
Sbjct: 236 GEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 303 CYVCGKPGHISRECDEARN*PQP 371
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 71.7 bits (168), Expect = 3e-13
Identities = 42/126 (33%), Positives = 52/126 (41%), Gaps = 17/126 (13%)
Frame = +3
Query: 18 GFDRQREKCFXCNRTGHFARDC----KEXADR-CYXCNGTGHXARECAQS--PDEPSC-- 170
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 171 --------YNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDGTKTCYVCGKPG 326
N G GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 327 HISREC 344
H S EC
Sbjct: 272 HRSNEC 277
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 216 GGRESATQTCYNCXKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 356
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 44.0 bits (99), Expect = 6e-05
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 17/109 (15%)
Frame = +3
Query: 24 DRQREKCFXCNRTGHFARDCKEX------------ADRCYXCNGT-----GHXARECAQS 152
+R+ C+ C + GH +R+C E + NG G +
Sbjct: 179 EREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEE 238
Query: 153 PDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 299
C+NC GH CPE R C+NC + GH S CP+ K
Sbjct: 239 RGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 18 GFDRQREKCFXCNRTGHFARDCKEXADRCYXCNGTGHXARECAQSPDEP 164
G +R KCF C GH + +C E C+ C GH + EC +P +P
Sbjct: 236 GEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 303 CYVCGKPGHISRECDEARN*PQP 371
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 70.9 bits (166), Expect = 5e-13
Identities = 44/130 (33%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Frame = +3
Query: 6 SRDSGFDR--QREKCFXCNRTGHFARDC----KEXADR-CYXCNGTGHXARECAQS--PD 158
S G DR + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 159 E-----PSCYNCNKTGHXXRNCPEG---GRESATQTCYNCXKSGHISRNCPDGTKTCYVC 314
E S + G EG E C+NC GH S CP+ + C+ C
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 478
Query: 315 GKPGHISREC 344
G+ GH S EC
Sbjct: 479 GEQGHRSNEC 488
Score = 58.4 bits (135), Expect = 3e-09
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 114 NGTGHXARECAQSPDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDG 293
NG G + +C+NC + GH +CPE +E + CYNC + GH SR+CP+
Sbjct: 241 NGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 300
Query: 294 TK 299
K
Sbjct: 301 RK 302
Score = 58.4 bits (135), Expect = 3e-09
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 114 NGTGHXARECAQSPDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDG 293
NG G + +C+NC + GH +CPE +E + CYNC + GH SR+CP+
Sbjct: 355 NGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 414
Query: 294 TK 299
K
Sbjct: 415 RK 416
Score = 50.4 bits (115), Expect = 7e-07
Identities = 33/112 (29%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Frame = +3
Query: 60 TGHFARDCKEXADRCYXCNGTGHXARECAQSPDEPS---CYNCNKTGHXXRNCPEG---- 218
+G +D E + C+ C GH + +C + E CYNC + GH R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 219 -GRESATQTCYNCXKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 350
GR T G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 222 RESATQTCYNCXKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 356
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 222 RESATQTCYNCXKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 356
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 15/107 (14%)
Frame = +3
Query: 24 DRQREKCFXCNRTGHFARDCKEXADRCYXCNGT-------------GHXARECAQSPDEP 164
+R+ C+ C + GH +RDC E NG G A + +
Sbjct: 392 EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERG 451
Query: 165 --SCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 299
C+NC GH CPE R C+NC + GH S CP+ K
Sbjct: 452 PMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 60 TGHFARDCKEXADRCYXCNGTGHXARECAQSPDEPS---CYNCNKTGHXXRNCPE 215
+G +D E + C+ C GH + +C + E CYNC + GH R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.9 bits (89), Expect = 0.001
Identities = 39/151 (25%), Positives = 58/151 (38%), Gaps = 29/151 (19%)
Frame = +3
Query: 6 SRDSGFDR--QREKCFXCNRTGHFARDC----KEXADR-CYXCNGTGHXARECAQS--PD 158
S G DR + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 159 EP-SCYNCNKTGHXXRNCPEGGRESATQTCY-------------------NCXKSGHISR 278
E + + +G N G +S + N SG +
Sbjct: 305 EGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQ 364
Query: 279 NCPDGTKTCYVCGKPGHISRECDEARN*PQP 371
+ + C+ C +PGH S +C E + +P
Sbjct: 365 DRGERNNNCFNCQQPGHRSNDCPEPKKEREP 395
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 70.9 bits (166), Expect = 5e-13
Identities = 44/130 (33%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Frame = +3
Query: 6 SRDSGFDR--QREKCFXCNRTGHFARDC----KEXADR-CYXCNGTGHXARECAQS--PD 158
S G DR + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 159 E-----PSCYNCNKTGHXXRNCPEG---GRESATQTCYNCXKSGHISRNCPDGTKTCYVC 314
E S + G EG E C+NC GH S CP+ + C+ C
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 478
Query: 315 GKPGHISREC 344
G+ GH S EC
Sbjct: 479 GEQGHRSNEC 488
Score = 58.4 bits (135), Expect = 3e-09
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 114 NGTGHXARECAQSPDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDG 293
NG G + +C+NC + GH +CPE +E + CYNC + GH SR+CP+
Sbjct: 241 NGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 300
Query: 294 TK 299
K
Sbjct: 301 RK 302
Score = 58.4 bits (135), Expect = 3e-09
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 114 NGTGHXARECAQSPDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDG 293
NG G + +C+NC + GH +CPE +E + CYNC + GH SR+CP+
Sbjct: 355 NGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 414
Query: 294 TK 299
K
Sbjct: 415 RK 416
Score = 50.4 bits (115), Expect = 7e-07
Identities = 33/112 (29%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Frame = +3
Query: 60 TGHFARDCKEXADRCYXCNGTGHXARECAQSPDEPS---CYNCNKTGHXXRNCPEG---- 218
+G +D E + C+ C GH + +C + E CYNC + GH R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 219 -GRESATQTCYNCXKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 350
GR T G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 222 RESATQTCYNCXKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 356
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 222 RESATQTCYNCXKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 356
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 15/107 (14%)
Frame = +3
Query: 24 DRQREKCFXCNRTGHFARDCKEXADRCYXCNGT-------------GHXARECAQSPDEP 164
+R+ C+ C + GH +RDC E NG G A + +
Sbjct: 392 EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERG 451
Query: 165 --SCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 299
C+NC GH CPE R C+NC + GH S CP+ K
Sbjct: 452 PMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 60 TGHFARDCKEXADRCYXCNGTGHXARECAQSPDEPS---CYNCNKTGHXXRNCPE 215
+G +D E + C+ C GH + +C + E CYNC + GH R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.9 bits (89), Expect = 0.001
Identities = 39/151 (25%), Positives = 58/151 (38%), Gaps = 29/151 (19%)
Frame = +3
Query: 6 SRDSGFDR--QREKCFXCNRTGHFARDC----KEXADR-CYXCNGTGHXARECAQS--PD 158
S G DR + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 159 EP-SCYNCNKTGHXXRNCPEGGRESATQTCY-------------------NCXKSGHISR 278
E + + +G N G +S + N SG +
Sbjct: 305 EGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQ 364
Query: 279 NCPDGTKTCYVCGKPGHISRECDEARN*PQP 371
+ + C+ C +PGH S +C E + +P
Sbjct: 365 DRGERNNNCFNCQQPGHRSNDCPEPKKEREP 395
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 70.9 bits (166), Expect = 5e-13
Identities = 44/130 (33%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Frame = +3
Query: 6 SRDSGFDR--QREKCFXCNRTGHFARDC----KEXADR-CYXCNGTGHXARECAQS--PD 158
S G DR + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 159 E-----PSCYNCNKTGHXXRNCPEG---GRESATQTCYNCXKSGHISRNCPDGTKTCYVC 314
E S + G EG E C+NC GH S CP+ + C+ C
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 478
Query: 315 GKPGHISREC 344
G+ GH S EC
Sbjct: 479 GEQGHRSNEC 488
Score = 58.4 bits (135), Expect = 3e-09
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 114 NGTGHXARECAQSPDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDG 293
NG G + +C+NC + GH +CPE +E + CYNC + GH SR+CP+
Sbjct: 241 NGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 300
Query: 294 TK 299
K
Sbjct: 301 RK 302
Score = 58.4 bits (135), Expect = 3e-09
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 114 NGTGHXARECAQSPDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDG 293
NG G + +C+NC + GH +CPE +E + CYNC + GH SR+CP+
Sbjct: 355 NGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 414
Query: 294 TK 299
K
Sbjct: 415 RK 416
Score = 50.4 bits (115), Expect = 7e-07
Identities = 33/112 (29%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Frame = +3
Query: 60 TGHFARDCKEXADRCYXCNGTGHXARECAQSPDEPS---CYNCNKTGHXXRNCPEG---- 218
+G +D E + C+ C GH + +C + E CYNC + GH R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 219 -GRESATQTCYNCXKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 350
GR T G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 222 RESATQTCYNCXKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 356
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 222 RESATQTCYNCXKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 356
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 15/107 (14%)
Frame = +3
Query: 24 DRQREKCFXCNRTGHFARDCKEXADRCYXCNGT-------------GHXARECAQSPDEP 164
+R+ C+ C + GH +RDC E NG G A + +
Sbjct: 392 EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERG 451
Query: 165 --SCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 299
C+NC GH CPE R C+NC + GH S CP+ K
Sbjct: 452 PMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 60 TGHFARDCKEXADRCYXCNGTGHXARECAQSPDEPS---CYNCNKTGHXXRNCPE 215
+G +D E + C+ C GH + +C + E CYNC + GH R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.9 bits (89), Expect = 0.001
Identities = 39/151 (25%), Positives = 58/151 (38%), Gaps = 29/151 (19%)
Frame = +3
Query: 6 SRDSGFDR--QREKCFXCNRTGHFARDC----KEXADR-CYXCNGTGHXARECAQS--PD 158
S G DR + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 159 EP-SCYNCNKTGHXXRNCPEGGRESATQTCY-------------------NCXKSGHISR 278
E + + +G N G +S + N SG +
Sbjct: 305 EGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQ 364
Query: 279 NCPDGTKTCYVCGKPGHISRECDEARN*PQP 371
+ + C+ C +PGH S +C E + +P
Sbjct: 365 DRGERNNNCFNCQQPGHRSNDCPEPKKEREP 395
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 61.3 bits (142), Expect = 4e-10
Identities = 34/95 (35%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +3
Query: 33 REKCFXCNRTGHFARDCKE---XADRCYXCNGTGHXARECAQSPDEP--SCYNCNKTGHX 197
R C C + GHFA DC + C C GH A +C Q P P C NC + GH
Sbjct: 592 RFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHF 650
Query: 198 XRNCP-EGGRESATQTCYNCXKSGHISRNCPDGTK 299
++C E R T+ C C + GH CP K
Sbjct: 651 AKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 60.1 bits (139), Expect = 9e-10
Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Frame = +3
Query: 18 GFDRQREKCFXCNRTGHFARDC-KEXADR--CYXCNGTGHXARECAQSPDEP--SCYNCN 182
G +R R C C GH +++C K R C C GH A +C Q P P C NC
Sbjct: 565 GGERPRG-CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQ-PRVPRGPCRNCG 622
Query: 183 KTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCP------DGTKTCYVCGKPGHISREC 344
GH +C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 623 IEGHFAVDCDQ--PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 56.8 bits (131), Expect = 8e-09
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Frame = +3
Query: 54 NRTGHFARDCKEXADRCYXCNGTGHXARECAQSPDEPS--CYNCNKTGHXXRNCPEGGRE 227
N+ G++ D E C+ C GH ++EC P P C NC + GH +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQP--R 612
Query: 228 SATQTCYNCXKSGHISRNCPDGTKT----CYVCGKPGHISREC--DEARN*PQPPC 377
C NC GH + +C D K C CG+ GH +++C + R P PC
Sbjct: 613 VPRGPCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPC 667
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Frame = +3
Query: 33 REKCFXCNRTGHFARDCK------EXADRCYXCNGTGHXARECAQSPDE 161
R C C + GHFA+DC+ E + C C GH EC P +
Sbjct: 638 RGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKD 686
Score = 35.5 bits (78), Expect = 0.021
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 303 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 395
C+ CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 61.3 bits (142), Expect = 4e-10
Identities = 34/95 (35%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +3
Query: 33 REKCFXCNRTGHFARDCKE---XADRCYXCNGTGHXARECAQSPDEP--SCYNCNKTGHX 197
R C C + GHFA DC + C C GH A +C Q P P C NC + GH
Sbjct: 592 RFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHF 650
Query: 198 XRNCP-EGGRESATQTCYNCXKSGHISRNCPDGTK 299
++C E R T+ C C + GH CP K
Sbjct: 651 AKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 60.1 bits (139), Expect = 9e-10
Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Frame = +3
Query: 18 GFDRQREKCFXCNRTGHFARDC-KEXADR--CYXCNGTGHXARECAQSPDEP--SCYNCN 182
G +R R C C GH +++C K R C C GH A +C Q P P C NC
Sbjct: 565 GGERPRG-CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQ-PRVPRGPCRNCG 622
Query: 183 KTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCP------DGTKTCYVCGKPGHISREC 344
GH +C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 623 IEGHFAVDCDQ--PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 56.8 bits (131), Expect = 8e-09
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Frame = +3
Query: 54 NRTGHFARDCKEXADRCYXCNGTGHXARECAQSPDEPS--CYNCNKTGHXXRNCPEGGRE 227
N+ G++ D E C+ C GH ++EC P P C NC + GH +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQP--R 612
Query: 228 SATQTCYNCXKSGHISRNCPDGTKT----CYVCGKPGHISREC--DEARN*PQPPC 377
C NC GH + +C D K C CG+ GH +++C + R P PC
Sbjct: 613 VPRGPCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPC 667
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Frame = +3
Query: 33 REKCFXCNRTGHFARDCK------EXADRCYXCNGTGHXARECAQSPDE 161
R C C + GHFA+DC+ E + C C GH EC P +
Sbjct: 638 RGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKD 686
Score = 35.5 bits (78), Expect = 0.021
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 303 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 395
C+ CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Frame = +3
Query: 75 RDCKEXADRCYXCNGTGHXARECAQ---SPDEPSCYNCNKTGHXXRNCPEGGRESATQ-T 242
+D K C+ C GH +C + S + C+ C H C + G + T
Sbjct: 222 QDQKITGSACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYAT 281
Query: 243 CYNCXKSGHISRNC--------PDGTKTCYVCGKPGHISRECDE 350
C+ C + GHISR+C PDG C VCG H+ R+C E
Sbjct: 282 CFVCKQVGHISRDCHQNVNGVYPDG-GCCNVCGANTHLRRDCPE 324
Score = 55.2 bits (127), Expect = 2e-08
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +3
Query: 165 SCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNC-PDGTK-----TCYVCGKPG 326
+C++C + GH +CP+ S+ C+ C H C G K TC+VC + G
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289
Query: 327 HISRECDEARN 359
HISR+C + N
Sbjct: 290 HISRDCHQNVN 300
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Frame = +3
Query: 42 CFXCNRTGHFARDCKEXADR-----CYXCNGTGHXARECAQSPDE----PSCYNCNKTGH 194
CF C GH DC + C+ C H EC + + +C+ C + GH
Sbjct: 231 CFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGH 290
Query: 195 XXRNCPE--GGRESATQTCYNCXKSGHISRNCPD 290
R+C + G C C + H+ R+CP+
Sbjct: 291 ISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPE 324
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 210 PEGGRESATQTCYNCXK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 371
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 102 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 159
Score = 31.5 bits (68), Expect = 0.35
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 99 RCYXCNGTG-HXARECAQ-SPDEPSCYNCNKTGHXXRNCPEGGRE 227
RC+ C H A+ C D CY C H CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 210 PEGGRESATQTCYNCXK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 371
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 31.5 bits (68), Expect = 0.35
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 99 RCYXCNGTG-HXARECAQ-SPDEPSCYNCNKTGHXXRNCPEGGRE 227
RC+ C H A+ C D CY C H CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 210 PEGGRESATQTCYNCXK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 371
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 31.5 bits (68), Expect = 0.35
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 99 RCYXCNGTG-HXARECAQ-SPDEPSCYNCNKTGHXXRNCPEGGRE 227
RC+ C H A+ C D CY C H CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 210 PEGGRESATQTCYNCXK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 371
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 31.5 bits (68), Expect = 0.35
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 99 RCYXCNGTG-HXARECAQ-SPDEPSCYNCNKTGHXXRNCPEGGRE 227
RC+ C H A+ C D CY C H CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 234 TQTCYNCXKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 374
+ TC+NC K GH + C + C CG P H + EC ++N Q P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 42 CFXCNRTGHFARDCKEXADRCYXCNGTGHXARECA 146
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 33.5 bits (73), Expect = 0.086
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +3
Query: 165 SCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 299
+C+NC K GH C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.1 bits (72), Expect = 0.11
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +3
Query: 93 ADRCYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXRNC---PEGGRESATQTCY 248
++ C+ C GH A EC S + C NC H C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 234 TQTCYNCXKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 374
+ TC+NC K GH + C + C CG P H + EC ++N Q P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 42 CFXCNRTGHFARDCKEXADRCYXCNGTGHXARECA 146
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 33.5 bits (73), Expect = 0.086
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +3
Query: 165 SCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 299
+C+NC K GH C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.1 bits (72), Expect = 0.11
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +3
Query: 93 ADRCYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXRNC---PEGGRESATQTCY 248
++ C+ C GH A EC S + C NC H C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 147 QSPDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSG-HISRNCPDGTKTCYVCGKP 323
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 625 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 683
Query: 324 GHISREC 344
GHI+ C
Sbjct: 684 GHIAWNC 690
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 93 ADRCYXCNGTGHXARECAQ-SPDEPS--CYNCNKTGHXXRNCPEGGRESATQTCYNCXKS 263
+DRC C G C++ S D S C C ++G +C + + C+ C +
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 264 GHISRNCP 287
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 35.5 bits (78), Expect = 0.021
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +3
Query: 36 EKCFXCNRTG-HF---ARDCKEXAD-RCYXCNGTGHXARECAQSPDEPSCYNCNKTGHXX 200
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GH
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687
Query: 201 RNCPE 215
NCP+
Sbjct: 688 WNCPK 692
Score = 35.1 bits (77), Expect = 0.028
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 24 DRQREKCFXCNRTGHFARDCKEXADR-CYXCNGTGHXARECAQSPDEPS 167
D +KC C ++G C + +R C+ CN GH A C + + S
Sbjct: 650 DNASQKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 698
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 15 SGFDRQREKCFXCNRTGHFARDC 83
S F + CF CN GH A +C
Sbjct: 668 SCFKLKNRACFRCNEMGHIAWNC 690
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 147 QSPDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSG-HISRNCPDGTKTCYVCGKP 323
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 528 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 586
Query: 324 GHISREC 344
GHI+ C
Sbjct: 587 GHIAWNC 593
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 93 ADRCYXCNGTGHXARECAQ-SPDEPS--CYNCNKTGHXXRNCPEGGRESATQTCYNCXKS 263
+DRC C G C++ S D S C C ++G +C + + C+ C +
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 264 GHISRNCP 287
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 35.5 bits (78), Expect = 0.021
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +3
Query: 36 EKCFXCNRTG-HF---ARDCKEXAD-RCYXCNGTGHXARECAQSPDEPSCYNCNKTGHXX 200
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GH
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590
Query: 201 RNCPE 215
NCP+
Sbjct: 591 WNCPK 595
Score = 35.1 bits (77), Expect = 0.028
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 24 DRQREKCFXCNRTGHFARDCKEXADR-CYXCNGTGHXARECAQSPDEPS 167
D +KC C ++G C + +R C+ CN GH A C + + S
Sbjct: 553 DNASQKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 601
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 15 SGFDRQREKCFXCNRTGHFARDC 83
S F + CF CN GH A +C
Sbjct: 571 SCFKLKNRACFRCNEMGHIAWNC 593
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 147 QSPDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSG-HISRNCPDGTKTCYVCGKP 323
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 539 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 597
Query: 324 GHISREC 344
GHI+ C
Sbjct: 598 GHIAWNC 604
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 93 ADRCYXCNGTGHXARECAQ-SPDEPS--CYNCNKTGHXXRNCPEGGRESATQTCYNCXKS 263
+DRC C G C++ S D S C C ++G +C + + C+ C +
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 264 GHISRNCP 287
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 35.5 bits (78), Expect = 0.021
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +3
Query: 36 EKCFXCNRTG-HF---ARDCKEXAD-RCYXCNGTGHXARECAQSPDEPSCYNCNKTGHXX 200
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GH
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601
Query: 201 RNCPE 215
NCP+
Sbjct: 602 WNCPK 606
Score = 35.1 bits (77), Expect = 0.028
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 24 DRQREKCFXCNRTGHFARDCKEXADR-CYXCNGTGHXARECAQSPDEPS 167
D +KC C ++G C + +R C+ CN GH A C + + S
Sbjct: 564 DNASQKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 612
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 15 SGFDRQREKCFXCNRTGHFARDC 83
S F + CF CN GH A +C
Sbjct: 582 SCFKLKNRACFRCNEMGHIAWNC 604
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/111 (27%), Positives = 38/111 (34%), Gaps = 2/111 (1%)
Frame = +3
Query: 51 CNRTGHFARDCKEXADRCYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXRNCPEGGR-- 224
CN H C D + C G H ++C + C C + R CP G
Sbjct: 419 CNPCAHEKYSCGSECDGMFSC-GIHHCTKKC----HDKECGECETGANRIRTCPCGRNTL 473
Query: 225 ESATQTCYNCXKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQPPC 377
+S T C + D TC GK H +C E P PPC
Sbjct: 474 QSLGVTRKKCTDMVPTCDSVCDKWLTCGTPGKNHHCREKCHEG---PCPPC 521
Score = 31.5 bits (68), Expect = 0.35
Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 7/91 (7%)
Frame = -3
Query: 294 CRRDSCGRCG------RTCXSYSRSXSQTPAPPRDSSVXXGXSCCS-CNMTARPGSVRTR 136
C CG C RTC R+ Q+ R +C S C+ G T
Sbjct: 448 CHDKECGECETGANRIRTCPC-GRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCG---TP 503
Query: 135 ALCAQCRYXCSNGQPXPCNPSQSVLCGCTXS 43
CR C G PCN + SV+C C S
Sbjct: 504 GKNHHCREKCHEGPCPPCNLNTSVICRCGTS 534
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 165 SCYNCNKTGHXXRNCPE-GGRESATQTCYNCXKSGHISRNCPDGTKTCYVCGKPGHISRE 341
+C+NC++ GH CP G+ Q ++ I TCY CG+ GH +
Sbjct: 205 TCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 342 C 344
C
Sbjct: 265 C 265
Score = 34.3 bits (75), Expect = 0.049
Identities = 18/74 (24%), Positives = 28/74 (37%)
Frame = +3
Query: 72 ARDCKEXADRCYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXRNCPEGGRESATQTCYN 251
A+ A C+ C+ GH A C P + N + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 252 CXKSGHISRNCPDG 293
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
Frame = +3
Query: 42 CFXCNRTGHFARDCKEXADRCYXCNGTGHXARECAQSPDEPS-----CYNCNKTGHXXRN 206
C C+ GH A C + N H + + PD+ + CY C + GH
Sbjct: 206 CHNCHERGHKATTCPHLPGQTRQ-NQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 207 CPEGGRESATQTCY 248
C +G + T +
Sbjct: 265 CHKGALAFLSNTAH 278
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.1 bits (82), Expect = 0.007
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 168 CYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNC 284
C NC H CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 34.7 bits (76), Expect = 0.037
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +3
Query: 243 CYNCXKSGHISRNCPDGTKT-----CYVCGKPGHISREC 344
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +3
Query: 99 RCYXCNGTGHXARECAQSP---DEPSCYNCNKTGHXXRNC--PEG 218
RC C H + EC +P ++ C NC GH ++C P+G
Sbjct: 429 RCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.1 bits (82), Expect = 0.007
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 168 CYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRNC 284
C NC H CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 34.7 bits (76), Expect = 0.037
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +3
Query: 243 CYNCXKSGHISRNCPDGTKT-----CYVCGKPGHISREC 344
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +3
Query: 99 RCYXCNGTGHXARECAQSP---DEPSCYNCNKTGHXXRNC--PEG 218
RC C H + EC +P ++ C NC GH ++C P+G
Sbjct: 429 RCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 36.7 bits (81), Expect = 0.009
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 237 QTCYNCXKSGHISRNCPDG 293
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 32.7 bits (71), Expect = 0.15
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 165 SCYNCNKTGHXXRNCPEG 218
+CY C + GH RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.1 bits (67), Expect = 0.46
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 297 KTCYVCGKPGHISREC 344
+ CY C +PGHISR C
Sbjct: 4 RNCYKCQQPGHISRNC 19
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 32.3 bits (70), Expect = 0.20
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 153 PDEPSCYNCNKTGHXXRNC---PEGG-RESATQTCYNCXKSGHISRNCP 287
P+ C C + G +C P+ RE C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Frame = +3
Query: 102 CYXCNGTGHXARECAQSPDE-------PSCYNCNKTGHXXRNCPE 215
C C G C+ +P P C+ C + GH CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 31.9 bits (69), Expect = 0.26
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +3
Query: 39 KCFXCNRTGHFARDCKEXADRCYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXRNCPEG 218
+C C+R GHF C + A AR+ S S Y N +G +N EG
Sbjct: 1356 QCHQCHRIGHFVESCPQRA--------LAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEG 1407
Query: 219 G 221
G
Sbjct: 1408 G 1408
Score = 30.7 bits (66), Expect = 0.61
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 135 RECAQ--SPDEPSCYNCNKTGHXXRNCPEG--GRESATQTCYNCXKSGHISRNCPDGTK 299
R+C Q +P + C+ C++ GH +CP+ +E+ + N S + S + G K
Sbjct: 1344 RKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFK 1402
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 31.1 bits (67), Expect = 0.46
Identities = 25/82 (30%), Positives = 28/82 (34%)
Frame = -3
Query: 294 CRRDSCGRCGRTCXSYSRSXSQTPAPPRDSSVXXGXSCCSCNMTARPGSVRTRALCAQCR 115
C S G CG+TC APP S G C C V T C C+
Sbjct: 66 CGCGSMGMCGQTCC--------PSAPPPCSCGTPG--CMQCVQQTVLVPVTTTTCCKCCQ 115
Query: 114 YXCSNGQPXPCNPSQSVLCGCT 49
C+N C CGCT
Sbjct: 116 PVCTNA----CTNGGGCSCGCT 133
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 30.7 bits (66), Expect = 0.61
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 102 CYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXRNCPEGG 221
CY C GH +++C QS N KT H N E G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVG 351
Score = 29.9 bits (64), Expect = 1.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 162 PSCYNCNKTGHXXRNCPEGGRES 230
P CY C GH ++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 28.7 bits (61), Expect = 2.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 243 CYNCXKSGHISRNCPDGT 296
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 30.3 bits (65), Expect = 0.80
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +3
Query: 102 CYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRN 281
C C+GT + + SC CN TG + +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 30.3 bits (65), Expect = 0.80
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +3
Query: 102 CYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRN 281
C C+GT + + SC CN TG + +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 29.9 bits (64), Expect = 1.1
Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 15/119 (12%)
Frame = +3
Query: 3 VSRDSGFDRQREKCFXCNRTGHFARDCKEXADRCYXCN----GTGHXARECAQSPDEPSC 170
+ D + + C CN GH+ C C T + A+ C S +E
Sbjct: 1845 ICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQL 1902
Query: 171 YNCN-KTGHXXRNCPE------GGRESATQTCYNCXKSGHI----SRNCPDGTKTCYVC 314
CN K G+ C G + + ++C C +G+ SR+C + CY+C
Sbjct: 1903 LQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 29.9 bits (64), Expect = 1.1
Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 15/119 (12%)
Frame = +3
Query: 3 VSRDSGFDRQREKCFXCNRTGHFARDCKEXADRCYXCN----GTGHXARECAQSPDEPSC 170
+ D + + C CN GH+ C C T + A+ C S +E
Sbjct: 1845 ICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQL 1902
Query: 171 YNCN-KTGHXXRNCPE------GGRESATQTCYNCXKSGHI----SRNCPDGTKTCYVC 314
CN K G+ C G + + ++C C +G+ SR+C + CY+C
Sbjct: 1903 LQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 285 PD-GTKTCYVCGKPGHISRECDEAR 356
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 285 PD-GTKTCYVCGKPGHISRECDEAR 356
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 285 PD-GTKTCYVCGKPGHISRECDEAR 356
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 87 EXADRCYXCNGTGHXARECAQSPDEPSCYNCNKTGH 194
E + C C+GT + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 29.9 bits (64), Expect = 1.1
Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 15/119 (12%)
Frame = +3
Query: 3 VSRDSGFDRQREKCFXCNRTGHFARDCKEXADRCYXCN----GTGHXARECAQSPDEPSC 170
+ D + + C CN GH+ C C T + A+ C S +E
Sbjct: 1845 ICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQL 1902
Query: 171 YNCN-KTGHXXRNCPE------GGRESATQTCYNCXKSGHI----SRNCPDGTKTCYVC 314
CN K G+ C G + + ++C C +G+ SR+C + CY+C
Sbjct: 1903 LQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 29.9 bits (64), Expect = 1.1
Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 15/119 (12%)
Frame = +3
Query: 3 VSRDSGFDRQREKCFXCNRTGHFARDCKEXADRCYXCN----GTGHXARECAQSPDEPSC 170
+ D + + C CN GH+ C C T + A+ C S +E
Sbjct: 1845 ICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQL 1902
Query: 171 YNCN-KTGHXXRNCPE------GGRESATQTCYNCXKSGHI----SRNCPDGTKTCYVC 314
CN K G+ C G + + ++C C +G+ SR+C + CY+C
Sbjct: 1903 LQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 29.5 bits (63), Expect = 1.4
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Frame = +3
Query: 51 CNRTGHFARDCKEXADRCYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXRNCP-----E 215
CN TG DC + + +C C G ++C Q PS +N G +C E
Sbjct: 990 CNDTGSIGSDCDQVSGQC-NCK-QGVFGKQCDQC--RPSYFNFTDAGCQFCHCNIYGSIE 1045
Query: 216 GGRESATQTCYNCXKS--GHISRNCPDG 293
G+ T C ++ G + C DG
Sbjct: 1046 DGKCDQTTGKCECRENVEGTMCEKCADG 1073
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 29.5 bits (63), Expect = 1.4
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Frame = -3
Query: 282 SCGR-CGRTCXS-------YSRSXSQTPAPPRDSSVXXGXSCCS-CNMTARPGSVRTRAL 130
SC R C R C S S++ +QTP + G C S C+ T R S R
Sbjct: 122 SCNRSCSRVCQSNPSASSSQSQTTTQTPLKVSIKVLDDGAKCMSTCSDTCR-SSCSNRVS 180
Query: 129 CAQCRYXCSNGQPXPCNPSQS 67
+ C C N C PSQS
Sbjct: 181 QSTCDATCQNTCSSMC-PSQS 200
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 29.5 bits (63), Expect = 1.4
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Frame = +3
Query: 51 CNRTGHFARDCKEXADRCYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXRNCP-----E 215
CN TG DC + + +C C G ++C Q PS +N G +C E
Sbjct: 990 CNDTGSIGSDCDQVSGQC-NCK-QGVFGKQCDQC--RPSYFNFTDAGCQFCHCNIYGSIE 1045
Query: 216 GGRESATQTCYNCXKS--GHISRNCPDG 293
G+ T C ++ G + C DG
Sbjct: 1046 DGKCDQTTGKCECRENVEGTMCEKCADG 1073
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 29.5 bits (63), Expect = 1.4
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Frame = +3
Query: 51 CNRTGHFARDCKEXADRCYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXRNCP-----E 215
CN TG DC + + +C C G ++C Q PS +N G +C E
Sbjct: 990 CNDTGSIGSDCDQVSGQC-NCK-QGVFGKQCDQC--RPSYFNFTDAGCQFCHCNIYGSIE 1045
Query: 216 GGRESATQTCYNCXKS--GHISRNCPDG 293
G+ T C ++ G + C DG
Sbjct: 1046 DGKCDQTTGKCECRENVEGTMCEKCADG 1073
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.1 bits (62), Expect = 1.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 243 CYNCXKSGHISRNCP 287
C++C + GHISR CP
Sbjct: 170 CFHCQEHGHISRMCP 184
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 28.7 bits (61), Expect = 2.4
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +2
Query: 200 TELSRGGAGVCDXDLL*LXQVRPHLPQLSRRHQDVL-RVRQARPHLARVRRGAELAAATL 376
T L R G + +V LP SR +DV+ + RQA P + RRG +++L
Sbjct: 644 TTLPRSGTAQWKNEYSDGEEVTEKLPVESRDWRDVINQQRQAAPGNSADRRGIAATSSSL 703
Query: 377 SPLQSTMYIMMPRTDDKQRTPRATHDNRLQYRCRAASAP 493
S L S YI R +K+R + +Y A P
Sbjct: 704 SNLPS--YI--NRRMEKEREREIEYRRDREYSMPPADPP 738
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 303 CYVCGKPGHISREC 344
CY CGK GH + EC
Sbjct: 411 CYYCGKRGHTANEC 424
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 102 CYXCNGTGHXARECAQSPDEPS 167
CY C GH A EC + + S
Sbjct: 411 CYYCGKRGHTANECRRKKSDES 432
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 27 RQREKCFXCNRTGHFARDCKEXA 95
R + +C C GH AR+CK+ A
Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 207 CPEGGRESATQTCYNCXKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN 359
CP ++ QTC + + R C + + C +C P HI+ C A++
Sbjct: 925 CPPCKKDHPLQTC--TMGAIEVKRFCINNGR-CTICSSPSHITGNCSYAQS 972
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 138 RALCAQCRYXCSNGQPXPCNPSQSVLCGC 52
R++C +C C N P P NP ++ C
Sbjct: 42 RSVCQECPSCCGNDGPQPFNPVFNIHFNC 70
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Frame = +3
Query: 72 ARDCKEXAD-RCYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXR----NCPE 215
A+ C+ D + Y GH R+C D P Y C K G R NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 28.3 bits (60), Expect = 3.2
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Frame = +3
Query: 168 CYNCNKTGHXXRN--CP-----EGGRESATQT--CYNCXKSGHISRNCPDGTKTCYVCGK 320
C C+ T H R+ CP E + A + C+ C +SGH C +TC C K
Sbjct: 314 CIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC-K 371
Query: 321 PGHISREC 344
H + C
Sbjct: 372 GNHHTVFC 379
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +3
Query: 42 CFXCNRTGHFARDCKEXADRCYXCNGTGH 128
CF C R+GH C C C G H
Sbjct: 348 CFGCLRSGHQRSKCSRPR-TCNHCKGNHH 375
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 219 GRESATQTCYNCXKSGHISRNCP 287
G T TC C + GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
Score = 26.6 bits (56), Expect = 9.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 153 PDEPSCYNCNKTGHXXRNCP 212
P +C C++ GH +NCP
Sbjct: 153 PPTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 219 GRESATQTCYNCXKSGHISRNCP 287
G T TC C + GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
Score = 26.6 bits (56), Expect = 9.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 153 PDEPSCYNCNKTGHXXRNCP 212
P +C C++ GH +NCP
Sbjct: 153 PPTYTCNRCSQPGHWYKNCP 172
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 165 SCYNCNKTGHXXRNCPEGGRES-ATQTCYNCXKSGHISRN 281
+C NC GH R+C + R+S A +T N + ++ N
Sbjct: 114 ACENCGAMGHQKRDCFDRPRKSNAKETNDNIAEDDYVQPN 153
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 285 PDGTKTCYVCGKPGHISRECDEARN 359
P+ + C +CG+ GH +EC A N
Sbjct: 258 PNQPRACDLCGQYGHELKECRGAEN 282
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = +3
Query: 102 CYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRN 281
C T +CA + DE Y CN R+CPE + C + K + +
Sbjct: 2805 CILLGATCDSKPDCADASDENPNY-CN-----TRSCPEDYNLCTNRRCIDSAKKCNHIDD 2858
Query: 282 CPDGT 296
C DG+
Sbjct: 2859 CGDGS 2863
>U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile
(unfertilizable) protein1 protein.
Length = 551
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 51 CNRTGHFARDC-KEXADRCYXCNGTGHXARECAQSPDEPSCYNCNK-TGHXXRNCPEGGR 224
C++ + A C K+ + C+G +CA DE C +C + +G C +G
Sbjct: 251 CSKCQNNAHKCGKQCIKASHVCDGVA----QCADGSDEQQC-DCQRCSGTDKALCDDGTC 305
Query: 225 ESATQTC 245
TQ C
Sbjct: 306 IMRTQVC 312
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = +3
Query: 102 CYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXRNCPEGGRESATQTCYNCXKSGHISRN 281
C T +CA + DE Y CN R+CPE + C + K + +
Sbjct: 2805 CILLGATCDSKPDCADASDENPNY-CN-----TRSCPEDYNLCTNRRCIDSAKKCNHIDD 2858
Query: 282 CPDGT 296
C DG+
Sbjct: 2859 CGDGS 2863
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -3
Query: 123 QCRYXCSNGQPXPCNPSQSVLC--GCTXSTSHVADRNRNPATP 1
+C C+ QP C PS S C C + A ++ NP TP
Sbjct: 277 RCLSTCTASQPSVCAPSCSTACQLSCDSIGAATAPQSTNP-TP 318
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 243 CYNCXKSGHISRNCPDGTKTCYVC 314
C NC K+ PD TK C +C
Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 219 GRESATQTCYNCXKSGHISRNCPDGTKTCY 308
G S C N +G +S CPDG TCY
Sbjct: 696 GDGSRLVQCSNPGGNGRVSGGCPDG-YTCY 724
>CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical
protein C42C1.4a protein.
Length = 1259
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/52 (28%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +3
Query: 57 RTGHFAR-DCKEXADRCYXCNGTGHXARECAQSPDEPSCYNCNKTGHXXRNC 209
R GHF +C DR C+G + PD P N + NC
Sbjct: 1200 RCGHFQHIECSTNIDRTCTCDGIPDRLVVPREKPDRPEKRNIFENWDTKLNC 1251
>AF039047-12|AAM15590.1| 226|Caenorhabditis elegans Hypothetical
protein K11D12.12 protein.
Length = 226
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 260 VRPHLPQLSRRHQDVLRVRQARPHLARVRRGAELAAATLS 379
+R H + R+H+DV R+ ++ +RR AE + LS
Sbjct: 178 IRQHEAEEKRQHRDVKRLAIEHGNMDEIRRKAEESVNKLS 217
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 243 CYNCXKSGHISRNCPDGTKTCYVC 314
C NC K+ PD TK C +C
Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,169,808
Number of Sequences: 27780
Number of extensions: 207678
Number of successful extensions: 1009
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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