Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4b21
(760 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form p... 33 0.85
AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isofor... 33 1.1
BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 doma... 32 2.6
BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein. 32 2.6
BC067474-1|AAH67474.1| 423|Homo sapiens G protein-coupled recep... 30 7.9
BC067473-1|AAH67473.1| 423|Homo sapiens G protein-coupled recep... 30 7.9
BC022505-1|AAH22505.1| 327|Homo sapiens vacuolar protein sortin... 30 7.9
AL596223-4|CAH71501.1| 327|Homo sapiens vacuolar protein sortin... 30 7.9
AL442635-2|CAH71779.1| 327|Homo sapiens vacuolar protein sortin... 30 7.9
AK022992-1|BAB14351.1| 327|Homo sapiens protein ( Homo sapiens ... 30 7.9
AF236081-1|AAF43705.1| 423|Homo sapiens orphan G-protein couple... 30 7.9
AF175266-1|AAF89954.1| 327|Homo sapiens vacuolar sorting protei... 30 7.9
AB040973-1|BAA96064.1| 424|Homo sapiens KIAA1540 protein protein. 30 7.9
>AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form
protein.
Length = 1721
Score = 33.5 bits (73), Expect = 0.85
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Frame = +3
Query: 195 EEISKRLKFSANYKGYHLEDVIRKPIEMLLR--TLSRQHLENNVNRRKVAPQQDPIKFTY 368
+E KRL+ KG L I KP++ + R + + LEN P+ P ++
Sbjct: 1354 KEFVKRLEMDPRCKGMPLSSFILKPMQRVTRYPLIIKNILEN-------TPENHP-DHSH 1405
Query: 369 KVHRPKNDTQFCRFITETINSLKNDEIMKPVEAEVQ-KMLYGDLPNGGRSQYLIARKMKT 545
H + + C + E + +N + ++ ++A VQ + L L + L RK
Sbjct: 1406 LKHALEKAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLSEQLVFNSVTNCLGPRKF-L 1464
Query: 546 PNEKYYSDQTTNQLIGWNFSD 608
+ K Y + +L G+ F+D
Sbjct: 1465 HSGKLYKAKNNKELYGFLFND 1485
>AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isoform
protein.
Length = 1721
Score = 33.1 bits (72), Expect = 1.1
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Frame = +3
Query: 195 EEISKRLKFSANYKGYHLEDVIRKPIEMLLR--TLSRQHLENNVNRRKVAPQQDPIKFTY 368
+E KRL KG L I KP++ + R + + LEN P+ P ++
Sbjct: 1354 KEFVKRLAMDPRCKGMPLSSFILKPMQRVTRYPLIIKNILEN-------TPENHP-DHSH 1405
Query: 369 KVHRPKNDTQFCRFITETINSLKNDEIMKPVEAEVQ-KMLYGDLPNGGRSQYLIARKMKT 545
H + + C + E + +N + ++ ++A VQ + L L + L RK
Sbjct: 1406 LKHALEKAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLSEQLVFNSVTNCLGPRKF-L 1464
Query: 546 PNEKYYSDQTTNQLIGWNFSD 608
+ K Y ++ +L G+ F+D
Sbjct: 1465 HSGKLYKAKSNKELYGFLFND 1485
>BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 domain
protein) protein.
Length = 1721
Score = 31.9 bits (69), Expect = 2.6
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Frame = +3
Query: 195 EEISKRLKFSANYKGYHLEDVIRKPIEMLLR--TLSRQHLENNVNRRKVAPQQDPIKFTY 368
+E KRL +G L I KP++ + R + + LEN P+ P ++
Sbjct: 1354 KEFVKRLAMDPRCRGMPLSSFILKPMQRVTRYPLIIKNILEN-------TPENHP-DHSH 1405
Query: 369 KVHRPKNDTQFCRFITETINSLKNDEIMKPVEAEVQ-KMLYGDLPNGGRSQYLIARKMKT 545
H + + C + E + +N + ++ ++A VQ + L L + L RK
Sbjct: 1406 LKHALEKAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLSEQLVFNSVTNCLGPRKF-L 1464
Query: 546 PNEKYYSDQTTNQLIGWNFSD 608
+ K Y ++ +L G+ F+D
Sbjct: 1465 HSGKLYKAKSNKELYGFLFND 1485
>BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein.
Length = 1716
Score = 31.9 bits (69), Expect = 2.6
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Frame = +3
Query: 195 EEISKRLKFSANYKGYHLEDVIRKPIEMLLR--TLSRQHLENNVNRRKVAPQQDPIKFTY 368
+E KRL +G L I KP++ + R + + LEN P+ P ++
Sbjct: 1349 KEFVKRLAMDPRCRGMPLSSFILKPMQRVTRYPLIIKNILEN-------TPENHP-DHSH 1400
Query: 369 KVHRPKNDTQFCRFITETINSLKNDEIMKPVEAEVQ-KMLYGDLPNGGRSQYLIARKMKT 545
H + + C + E + +N + ++ ++A VQ + L L + L RK
Sbjct: 1401 LKHALEKAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLSEQLVFNSVTNCLGPRKF-L 1459
Query: 546 PNEKYYSDQTTNQLIGWNFSD 608
+ K Y ++ +L G+ F+D
Sbjct: 1460 HSGKLYKAKSNKELYGFLFND 1480
>BC067474-1|AAH67474.1| 423|Homo sapiens G protein-coupled receptor
83 protein.
Length = 423
Score = 30.3 bits (65), Expect = 7.9
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -3
Query: 572 LV*IVFFVGCFHFSCNEVLTSSAIW*ITI*HFLYFSFNWFHNFIVF*TVNSFCYKPAELC 393
LV ++F + F +C +L SS + I + LYF+F+WF ++S CY P C
Sbjct: 296 LVVVLFALCWFPLNCYVLLLSSKV--IRTNNALYFAFHWF-------AMSSTCYNPFIYC 346
>BC067473-1|AAH67473.1| 423|Homo sapiens G protein-coupled receptor
83 protein.
Length = 423
Score = 30.3 bits (65), Expect = 7.9
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -3
Query: 572 LV*IVFFVGCFHFSCNEVLTSSAIW*ITI*HFLYFSFNWFHNFIVF*TVNSFCYKPAELC 393
LV ++F + F +C +L SS + I + LYF+F+WF ++S CY P C
Sbjct: 296 LVVVLFALCWFPLNCYVLLLSSKV--IRTNNALYFAFHWF-------AMSSTCYNPFIYC 346
>BC022505-1|AAH22505.1| 327|Homo sapiens vacuolar protein sorting
26 homolog A (S. pombe) protein.
Length = 327
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 213 LKFSANYKGYHLEDVIRKPIEMLLRTLSRQHLENNVNRRKV 335
++F N YHL+DVI I LL + QH+E + ++++
Sbjct: 176 IEFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEI 216
>AL596223-4|CAH71501.1| 327|Homo sapiens vacuolar protein sorting
26 homolog A (S. pombe) protein.
Length = 327
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 213 LKFSANYKGYHLEDVIRKPIEMLLRTLSRQHLENNVNRRKV 335
++F N YHL+DVI I LL + QH+E + ++++
Sbjct: 176 IEFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEI 216
>AL442635-2|CAH71779.1| 327|Homo sapiens vacuolar protein sorting
26 homolog A (S. pombe) protein.
Length = 327
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 213 LKFSANYKGYHLEDVIRKPIEMLLRTLSRQHLENNVNRRKV 335
++F N YHL+DVI I LL + QH+E + ++++
Sbjct: 176 IEFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEI 216
>AK022992-1|BAB14351.1| 327|Homo sapiens protein ( Homo sapiens
cDNA FLJ12930 fis, clone NT2RP2004816, highly similar to
H58 PROTEIN. ).
Length = 327
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 213 LKFSANYKGYHLEDVIRKPIEMLLRTLSRQHLENNVNRRKV 335
++F N YHL+DVI I LL + QH+E + ++++
Sbjct: 176 IEFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEI 216
>AF236081-1|AAF43705.1| 423|Homo sapiens orphan G-protein coupled
receptor GPR72 protein.
Length = 423
Score = 30.3 bits (65), Expect = 7.9
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -3
Query: 572 LV*IVFFVGCFHFSCNEVLTSSAIW*ITI*HFLYFSFNWFHNFIVF*TVNSFCYKPAELC 393
LV ++F + F +C +L SS + I + LYF+F+WF ++S CY P C
Sbjct: 296 LVVVLFALCWFPLNCYVLLLSSKV--IRTNNALYFAFHWF-------AMSSTCYNPFIYC 346
>AF175266-1|AAF89954.1| 327|Homo sapiens vacuolar sorting protein
26 protein.
Length = 327
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 213 LKFSANYKGYHLEDVIRKPIEMLLRTLSRQHLENNVNRRKV 335
++F N YHL+DVI I LL + QH+E + ++++
Sbjct: 176 IEFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEI 216
>AB040973-1|BAA96064.1| 424|Homo sapiens KIAA1540 protein protein.
Length = 424
Score = 30.3 bits (65), Expect = 7.9
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -3
Query: 572 LV*IVFFVGCFHFSCNEVLTSSAIW*ITI*HFLYFSFNWFHNFIVF*TVNSFCYKPAELC 393
LV ++F + F +C +L SS + I + LYF+F+WF ++S CY P C
Sbjct: 297 LVVVLFALCWFPLNCYVLLLSSKV--IRTNNALYFAFHWF-------AMSSTCYNPFIYC 347
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,927,305
Number of Sequences: 237096
Number of extensions: 2034864
Number of successful extensions: 8307
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8307
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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