Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4b16
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    25   0.48 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.1  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   5.9  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   5.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   5.9  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.8  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 125 RLICDNIIKSIK*FGTRLSTLYGRQGLALCS 33
           RL+ DN+    K FG  L  L+GR  L L S
Sbjct: 161 RLLADNVANFNKIFGWSLIFLFGRIVLQLLS 191


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -2

Query: 390 VYYQR-WQSVHLDKKMLL 340
           VY  R WQ +HL+KK +L
Sbjct: 531 VYNHRPWQQLHLNKKQIL 548


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = +3

Query: 360 NAQIATFDNRRLIYATILFIKRNLFFIIEVTSLVDCDF 473
           N ++   +N   + A +LF   ++++ +  T L+  DF
Sbjct: 92  NLKLDRENNSSFVVANVLFQLIHVYYTVVFTLLLGVDF 129


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = +3

Query: 360 NAQIATFDNRRLIYATILFIKRNLFFIIEVTSLVDCDF 473
           N ++   +N   + A +LF   ++++ +  T L+  DF
Sbjct: 92  NLKLDRENNSSFVVANVLFQLIHVYYTVVFTLLLGVDF 129


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = +3

Query: 360 NAQIATFDNRRLIYATILFIKRNLFFIIEVTSLVDCDF 473
           N ++   +N   + A +LF   ++++ +  T L+  DF
Sbjct: 412 NLKLDRENNSSFVVANVLFQLIHVYYTVVFTLLLGVDF 449


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 5/24 (20%), Positives = 15/24 (62%)
 Frame = -3

Query: 419 YK*YCRIYESSIIKGGNLCIWTKK 348
           Y+ + +     ++ GG +C+W+++
Sbjct: 493 YRPWVQHGHQELVLGGEVCLWSEQ 516


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,598
Number of Sequences: 336
Number of extensions: 2635
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)