Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4b15
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   2.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   3.8  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.9  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.9  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 578 PHLHLGQKPVEQIDGPDE 525
           P + +  KP ++IDG D+
Sbjct: 66  PEIDIEDKPAQKIDGEDD 83


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
 Frame = +3

Query: 15  LLSRSLEFVRTRKKN---QILNHRVVF 86
           L+ ++  F + + +N   Q++NHRVVF
Sbjct: 309 LIKKADSFCKKKLENYSLQLINHRVVF 335


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 473 CAIPSAGRHFAALRLRG 423
           C  P+AG HF A    G
Sbjct: 8   CGEPAAGFHFGAFTCEG 24


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 472 APSLAPVVTSPLSDSAGKRSFG*DFCSRS 386
           +PS    V+  + DS+  R F  + C+RS
Sbjct: 115 SPSPTSSVSPEVKDSSRDRPFTCEVCNRS 143


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 340 SSRDVDATGERHSAASGCLAPALNMIGTVGAS 245
           SS     +  +HS++S   +PA  M   V A+
Sbjct: 36  SSSSPSGSSPQHSSSSASTSPAARMYPYVSAA 67


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 340 SSRDVDATGERHSAASGCLAPALNMIGTVGAS 245
           SS     +  +HS++S   +PA  M   V A+
Sbjct: 36  SSSSPSGSSPQHSSSSASTSPAARMYPYVSAA 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,004
Number of Sequences: 336
Number of extensions: 2600
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)