Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4b14
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   7.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.3  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 347 DAHLKHGAGHVGSDGP 394
           +AHL+ G G +G+ GP
Sbjct: 190 EAHLRKGRGAIGAYGP 205


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 322 WSPAVNIVASSSLYRNRAAA 263
           WSPA    A+++ Y+  AAA
Sbjct: 108 WSPAATAAATATEYKYSAAA 127


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 97  ICEDVHEKNPPYVWRVDQ 150
           IC+ +HE N   VW  +Q
Sbjct: 802 ICDFLHEDNTTLVWDNEQ 819


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 443 NQR*SKHAARNDNSGSTRQSAFGYCGPRSFDEVPE 547
           +Q+ S H  R + SGS   S    C  R     PE
Sbjct: 793 HQQQSHHYGRRERSGSESSSISERCSSRVESLTPE 827


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 123 IFLMNIFTNVLFS*SPLRTINLLSKI 46
           +  +  F N+LF    L  + +LSKI
Sbjct: 81  LVFLTYFFNILFRKKLLNAVKILSKI 106



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +3

Query: 270 ALFLYNELEATIFTA 314
           ALFL+ +L AT++T+
Sbjct: 273 ALFLFFQLWATVYTS 287


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 668 YLPLLQIWHIESLTIML 618
           +L  L +WH+E+ T  L
Sbjct: 16  FLKALTVWHVENPTYRL 32


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 123 IFLMNIFTNVLFS*SPLRTINLLSKI 46
           +  +  F N+LF    L  + +LSKI
Sbjct: 77  LVFLTYFFNILFRKKLLNAVKILSKI 102



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +3

Query: 270 ALFLYNELEATIFTA 314
           ALFL+ +L AT++T+
Sbjct: 269 ALFLFFQLWATVYTS 283


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/37 (18%), Positives = 17/37 (45%)
 Frame = +3

Query: 303  IFTAGDHAHISALEKTLISSMVLGMLALMVHLWVCSM 413
            ++       I  + K +I  ++ G +     +W+CS+
Sbjct: 1141 VYEFASDERIKLVIKAIIIMILSGCIIFTEGIWICSL 1177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,008
Number of Sequences: 336
Number of extensions: 3591
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)