Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4b13
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC199170-5|ABO33263.1|   95|Caenorhabditis elegans Hypothetical ...    33   0.26 
Z81054-2|CAB02880.3|  223|Caenorhabditis elegans Hypothetical pr...    31   0.78 
AC006610-3|AAK85449.1|  264|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p...    27   9.6  
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AC103567-8|AAL35729.1|  305|Caenorhabditis elegans Hypothetical ...    27   9.6  

>AC199170-5|ABO33263.1|   95|Caenorhabditis elegans Hypothetical
           protein T08D2.4 protein.
          Length = 95

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +2

Query: 14  FRTSPVVNLCVKNHSPQAYIPHILQVTEEVCFVCINRFLKIYRLNY 151
           F   P  ++C++     ++IP +L      C +CI + L+   L +
Sbjct: 20  FNMKPTCSICMEEFDANSHIPKVLICGHSFCIICIEKHLRSSNLTF 65


>Z81054-2|CAB02880.3|  223|Caenorhabditis elegans Hypothetical
           protein F01D4.5a protein.
          Length = 223

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +3

Query: 222 LESSKTSENK--PNHKKSIKKVANNQPTETYASNNNK*TRIN 341
           LES+  S +K  P  ++ +KK   N+  E Y  N N  T+IN
Sbjct: 6   LESTSNSVHKSPPKKRRRVKKKKRNEEDEEYEENKNMATQIN 47


>AC006610-3|AAK85449.1|  264|Caenorhabditis elegans Hypothetical
           protein C30F12.3 protein.
          Length = 264

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = -2

Query: 376 TVLALVFCDFYQFIRVHLLLLEAYVSVGWLFATFLIDFLWFGLFSE 239
           TVL  +F    +F+  +LLL  A +++G +   F + F++ GLF +
Sbjct: 110 TVLWAIFAQRAEFLVPYLLLQGAGLAIGLI---FFVSFMYIGLFGD 152


>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
           protein F02E9.4b protein.
          Length = 1507

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +1

Query: 238 LQKINRTIKNLLKRWQITNQLKHMLPIIINELV*IDKNHKTLVLKL*TIVATYKND 405
           L+K  R +   LK     NQL H++ ++IN    +D   + L+ +L  I+ T  +D
Sbjct: 687 LKKSYRILYERLKSRTTPNQLSHLM-VLINAYANLDITREQLISELPKIMGTSGSD 741


>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
           protein F02E9.4a protein.
          Length = 1505

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +1

Query: 238 LQKINRTIKNLLKRWQITNQLKHMLPIIINELV*IDKNHKTLVLKL*TIVATYKND 405
           L+K  R +   LK     NQL H++ ++IN    +D   + L+ +L  I+ T  +D
Sbjct: 687 LKKSYRILYERLKSRTTPNQLSHLM-VLINAYANLDITREQLISELPKIMGTSGSD 741


>AC103567-8|AAL35729.1|  305|Caenorhabditis elegans Hypothetical
           protein Y51F10.2 protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +2

Query: 20  TSPVVNLCVKNHSPQAYIPHILQVTEEVCFVCINRFLKIYRLNY 151
           ++P   +C++      ++P ILQ    VC  CI    +  R+N+
Sbjct: 15  STPSCRICLEPFDEGQHLPKILQCAHTVCERCIGLLDEQSRINH 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,889,369
Number of Sequences: 27780
Number of extensions: 233345
Number of successful extensions: 671
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)