Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4b10
(482 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0335 + 2652334-2652340,2652459-2652550,2652642-2653362,265... 75 4e-14
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 36 0.013
09_02_0112 - 4396756-4397406,4397514-4397717 31 0.64
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150... 30 0.85
12_02_0651 + 21522089-21522128,21522472-21522593,21523386-215235... 29 1.5
10_08_0048 - 14441540-14441620,14442044-14442111,14442275-144424... 29 1.5
10_01_0326 + 3574129-3574329,3575144-3575692,3575914-3576072,357... 29 2.0
05_04_0035 + 17378541-17381276 29 2.0
04_04_1401 + 33279092-33279286,33280223-33280306,33280459-332805... 29 2.0
03_05_0491 - 24868261-24869383,24869482-24869561,24870193-248702... 29 2.0
06_03_0455 + 20978658-20978677,20979104-20979608 29 2.6
03_06_0462 + 34113877-34114463,34117294-34117466,34118049-341182... 29 2.6
10_08_0130 - 15032348-15033338,15033459-15033517 28 4.5
03_06_0389 - 33567385-33567969,33568052-33568402,33568646-335688... 28 4.5
03_04_0098 - 17275045-17275665 28 4.5
02_05_0733 + 31309835-31310434,31314138-31314254,31314364-313148... 28 4.5
02_02_0535 - 11292509-11294679,11294971-11295040,11295268-112953... 28 4.5
01_06_1007 - 33733500-33733604,33733837-33733917,33734191-337342... 28 4.5
05_02_0115 - 6758540-6758771,6759417-6759524,6759670-6759840,675... 27 6.0
11_01_0732 + 6065852-6066531,6067066-6067141,6067231-6067357,606... 27 7.9
>05_01_0335 +
2652334-2652340,2652459-2652550,2652642-2653362,
2653456-2653533,2653658-2653684,2653871-2653938,
2654089-2654174,2654251-2654333,2654478-2654620,
2654709-2654810,2654906-2655199,2655282-2655404,
2655733-2656119
Length = 736
Score = 74.5 bits (175), Expect = 4e-14
Identities = 37/122 (30%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Frame = +2
Query: 2 LCEFDRKYQLSIQFTVWDKIKDIENQSKQALTNLAQFLVHLIMEKGLALSVLKIIQ---F 172
LC D+ ++ S+Q+ +WD K+++N NLA+ + ++ L+L+ LK+++
Sbjct: 596 LCSHDKNHKFSLQYCIWDHFKELDNMELNRSMNLAKLVAEMLANFTLSLATLKVVKNLAV 655
Query: 173 SELSKRSVRFMRQVLLSIIMNEDVASSLEVFQRVARPPKLHVFRESLRLFI-QHFLVKTA 349
+ KR++ F ++L ++ +D A VF R+A P+L + R+ L LFI QH + K
Sbjct: 656 EVIPKRTIHF--RMLFETLLQKDDAVVWNVFTRIAGLPELEILRDGLVLFIKQHVIAKDT 713
Query: 350 GR 355
G+
Sbjct: 714 GK 715
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 36.3 bits (80), Expect = 0.013
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -2
Query: 340 HQEVLDEQPQALPEHVQLGRPGHPLEHLERRGHVFVHYDRQQNLPHEANRPLAQLRELDD 161
HQ Q Q L +H+QL G PL+ + +GH QQ + + + Q+++
Sbjct: 688 HQLQQQLQQQQLQQHMQLQTQGLPLQQQQSQGHPLQQQQMQQMQQQQQQQQIQQMQQQQQ 747
Query: 160 LEHRERQ 140
++ ++Q
Sbjct: 748 MQQMQQQ 754
>09_02_0112 - 4396756-4397406,4397514-4397717
Length = 284
Score = 30.7 bits (66), Expect = 0.64
Identities = 21/57 (36%), Positives = 22/57 (38%)
Frame = -2
Query: 430 PGEYRVDVGGAQGERGGVVRPQGAAAARGLHQEVLDEQPQALPEHVQLGRPGHPLEH 260
P E + GG Q ER GVV A G H EVL L V R P H
Sbjct: 122 PQEGELQRGGVQSERAGVVADVPVEAPGGTHGEVLRPVGVELDGDVPRPRQRAPAAH 178
>01_05_0564 +
23312419-23312987,23314652-23314751,23314832-23315055,
23315212-23316041,23316161-23316275,23316786-23316905,
23317410-23317450,23317546-23317595,23317684-23317719,
23317836-23317856
Length = 701
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -2
Query: 412 DVGGAQGERGGVVRPQGAAAARGLHQEVLDEQPQALP 302
+V GAQGE G +G AA G +E +++P A+P
Sbjct: 133 EVAGAQGEDGEKGDVEGEAAVEGDGEEKKEQEPFAVP 169
>12_02_0651 +
21522089-21522128,21522472-21522593,21523386-21523544,
21523653-21523730,21523821-21523865,21524121-21524187,
21524261-21524322,21524407-21524546,21524752-21524878,
21524957-21525071,21525210-21525298,21525533-21525616,
21525857-21526219,21526300-21526689,21526835-21526894,
21527530-21527553
Length = 654
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 186 LLSSENWMILSTESARP 136
L+SS NW +LSTE +RP
Sbjct: 86 LVSSRNWAVLSTEGSRP 102
>10_08_0048 - 14441540-14441620,14442044-14442111,14442275-14442493,
14442506-14444508,14447541-14448410,14448533-14448576,
14449920-14450093
Length = 1152
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = -2
Query: 283 RPGHPLEHLERRGHVFVHYDRQQNLPHEANRPLAQLREL 167
R GHP+ H + +H+ ++ L H+A++ L +++ L
Sbjct: 972 RSGHPVNHAIHDWNNVIHFFCKKRLMHDAHKALGKMKAL 1010
>10_01_0326 +
3574129-3574329,3575144-3575692,3575914-3576072,
3576349-3577543,3577626-3577762,3578052-3578242,
3578888-3579218
Length = 920
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Frame = -2
Query: 337 QEVLDEQPQALPEHVQLGRPGHPLEHL----ERRGHVFVHYDRQQNLPHEANRPLAQLRE 170
Q LDEQ Q + P L+H E++ V +QQ PH+ + Q+ +
Sbjct: 451 QHRLDEQHQRQDHQPKQNHPHDELQHQKQQPEQQQQDQVQQQQQQEQPHDQHLQQVQMHD 510
Query: 169 LDD-LEHRERQ 140
L H ERQ
Sbjct: 511 QQQPLHHEERQ 521
>05_04_0035 + 17378541-17381276
Length = 911
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -2
Query: 409 VGGAQGERGGVVRPQGAAAARGLHQEVLDEQPQALPEHVQLGRP-GHPLEHLERRGHVF 236
VG Q + PQ G H + E QA+ +H + G P G P H + R F
Sbjct: 779 VGSTQPPQAQFGAPQAPPPLPGFHYQNRPEYGQAVDQHNRFGSPQGEPRFHTQPRQQGF 837
>04_04_1401 +
33279092-33279286,33280223-33280306,33280459-33280524,
33280945-33281028,33281181-33281246,33281719-33281802,
33281955-33282020,33282323-33282388,33282667-33282726,
33282805-33282888,33282968-33283111,33283552-33283586,
33283694-33283746,33283828-33283928,33284516-33284974
Length = 548
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/53 (37%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +2
Query: 86 QALTNLAQFLVHLIMEKGLALSVLKIIQFSELSKRSVRFMRQVL-LSIIMNED 241
+AL+ Q L++LI EKG+A+ L I ++++K S+RF+R + + I +ED
Sbjct: 330 KALSAFEQ-LINLI-EKGVAVEQLYQIDETDITKNSLRFLRFLTEIEICTHED 380
>03_05_0491 -
24868261-24869383,24869482-24869561,24870193-24870249,
24870567-24870660,24871013-24871099,24871188-24871347,
24871440-24871674
Length = 611
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 397 QGERGGVVRPQGAAAARGLHQEVLDEQPQALPEHVQLGRPGHP 269
QGE +V +GA A H+ + P+HV +G G+P
Sbjct: 297 QGEAEYIVNQKGALRAEEGHESSRSDSVSTRPKHVVVGFVGYP 339
>06_03_0455 + 20978658-20978677,20979104-20979608
Length = 174
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 130 GEGPGALGAQDHPVLGAEQAVG 195
G G GA GA++ P GAE AVG
Sbjct: 22 GWGLGAAGAEERPEAGAEAAVG 43
>03_06_0462 +
34113877-34114463,34117294-34117466,34118049-34118233,
34118865-34118957
Length = 345
Score = 28.7 bits (61), Expect = 2.6
Identities = 24/76 (31%), Positives = 32/76 (42%)
Frame = -2
Query: 358 AAARGLHQEVLDEQPQALPEHVQLGRPGHPLEHLERRGHVFVHYDRQQNLPHEANRPLAQ 179
AA RG H L + AL + P P + L V VH+ R PH A +A
Sbjct: 2 AARRGPHVIKLHDSAPALLGRAPMPPPPGPRDELPPPSAVLVHHPRGGLAPHPA---VAA 58
Query: 178 LRELDDLEHRERQALL 131
L + + R+ Q LL
Sbjct: 59 LEDRLAVRDRDIQELL 74
>10_08_0130 - 15032348-15033338,15033459-15033517
Length = 349
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -3
Query: 159 LSTESARPFSIIK*TRNCAKFVSACFDWFSMSFILSHTVNCMDS*YFLSN 10
+ S ++ +C ACFD+ + S ILS VN D Y + +
Sbjct: 260 IDANSVATILVLADKHHCYGLREACFDFLNSSAILSAIVNTSDFQYLIQS 309
>03_06_0389 -
33567385-33567969,33568052-33568402,33568646-33568848,
33569044-33569299,33569459-33569671,33569757-33569882,
33569965-33570102,33570191-33570536,33570630-33570896,
33571192-33571378,33571457-33571556,33571659-33571909,
33572242-33572428,33572562-33572573
Length = 1073
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 340 HQEVLDEQPQALPEHVQLGRPGHPLEHLERRGHVFVHYDRQQNLPHEANRPLAQL 176
H ++ E P A P+H+ P+ ++ RRGH F + + N E + L +
Sbjct: 148 HSQISGEIPGASPDHMM-----SPVGNIGRRGHPFPYVNHSPNPSREFSGSLGNV 197
>03_04_0098 - 17275045-17275665
Length = 206
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 246 PRRSRCSSGWPGRPSCTCS 302
P RCS GW P+CT S
Sbjct: 45 PWGDRCSHGWTSSPACTLS 63
>02_05_0733 +
31309835-31310434,31314138-31314254,31314364-31314806,
31316831-31317137
Length = 488
Score = 27.9 bits (59), Expect = 4.5
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = -2
Query: 307 LPEHVQLGRPGHPLEHLERRGHVFVHYDRQQNLPHEANRPLAQLRELDDLEH----RERQ 140
LP HV+ H L H+E R + H +R+ HE R + R ++D+ H +ER
Sbjct: 283 LPRHVE---EMHHLRHVEERRLPYDHEERRLPYDHEERR---RPRYVEDIRHPQFLKERH 336
Query: 139 AL 134
A+
Sbjct: 337 AI 338
>02_02_0535 -
11292509-11294679,11294971-11295040,11295268-11295324,
11298629-11298789,11299123-11299156
Length = 830
Score = 27.9 bits (59), Expect = 4.5
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = -2
Query: 382 GVVRPQGAAAARGLHQEVLDEQPQALPEHVQLGRPGHPLEHLERRGHVFVHYDRQQNLPH 203
G +RP GA GL Q L +P + RP H + ++ F + Q P
Sbjct: 283 GPIRPNGAMLTPGLVQHNLQRPNGLVPPQMLSRRPQHGMAPIQHSPPQFSQFHAQMLGP- 341
Query: 202 EANRPLAQLRELDDLEH 152
P Q R++ + +H
Sbjct: 342 --RHPPPQGRQMYNPQH 356
>01_06_1007 -
33733500-33733604,33733837-33733917,33734191-33734238,
33734364-33734549,33735148-33735678,33735823-33735864,
33735945-33736065,33736200-33736281,33737169-33737227,
33738492-33738564,33738694-33738913
Length = 515
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 406 GGAQGERGGV-VRPQGAAAARGLHQEVLDEQPQ 311
GG G GGV + P+G +AA + D QPQ
Sbjct: 38 GGGGGSGGGVPLPPRGGSAAAAAAKRAADPQPQ 70
>05_02_0115 -
6758540-6758771,6759417-6759524,6759670-6759840,
6759967-6760077,6760562-6760663,6761139-6761366,
6761568-6761696,6761753-6761869,6761955-6762301,
6762377-6762931,6763104-6763182,6763429-6763595,
6763857-6764075,6764956-6765139,6765175-6765371,
6765717-6766035,6766379-6766538,6767642-6767794,
6767911-6768013
Length = 1226
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 23 YQLSIQFTVWDKIKDIENQSKQALTNLAQFLVHLI 127
YQLS+ T +D + D ++ + + TN+ FL ++
Sbjct: 711 YQLSLLTTFYDILADEKSSNSKEYTNIVNFLSKIV 745
>11_01_0732 +
6065852-6066531,6067066-6067141,6067231-6067357,
6068084-6068289
Length = 362
Score = 27.1 bits (57), Expect = 7.9
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 10/65 (15%)
Frame = -2
Query: 406 GGAQGERGGVVRPQGAAAAR-----GLHQEV-----LDEQPQALPEHVQLGRPGHPLEHL 257
G G+ G + RPQGA R G HQ ++EQP L + L P P+
Sbjct: 26 GPYAGDHGPIARPQGAPHHRHGHGHGHHQRTSSESFIEEQPSWLDD--LLNEPETPVRQH 83
Query: 256 ERRGH 242
R GH
Sbjct: 84 GRAGH 88
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,355,462
Number of Sequences: 37544
Number of extensions: 194105
Number of successful extensions: 895
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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