Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4b09
(677 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 4e-22
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 101 5e-22
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 101 5e-22
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 100 9e-22
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 99 2e-21
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 100 2e-21
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 5e-21
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 7e-21
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 9e-21
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 6e-15
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 73 2e-13
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 71 9e-13
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 8e-12
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 65 4e-11
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 58 5e-09
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 56 3e-08
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 53 2e-07
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 39 0.003
SB_45852| Best HMM Match : I-set (HMM E-Value=0) 28 6.0
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 101 bits (243), Expect = 4e-22
Identities = 45/79 (56%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
Frame = +2
Query: 86 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGK 253
M+E + +H+GQAGVQ NACWELYCLEHGI+PDG + D+S FFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 254 FVPRVVMIDLEPTPIG*LK 310
VPR V +DLEP+ +G +K
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 101 bits (242), Expect = 5e-22
Identities = 46/75 (61%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Frame = +2
Query: 86 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGK 253
M+E + IH+GQAGVQ NACWELYCLEHGI+PDG + D+S FFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 254 FVPRVVMIDLEPTPI 298
VPR V +DLEPT +
Sbjct: 61 HVPRAVFVDLEPTVV 75
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 4/74 (5%)
Frame = +2
Query: 89 KEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGKF 256
+E + IH+GQAGVQ NACWELYCLEHGI+PDG + D+S FFSETGAGK
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 257 VPRVVMIDLEPTPI 298
VPR V +DLEPT +
Sbjct: 495 VPRAVFVDLEPTVV 508
Score = 74.5 bits (175), Expect = 7e-14
Identities = 31/47 (65%), Positives = 41/47 (87%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
DE+RTG YRQLFH LITGKEDAA+N+ARG++ VG+E++D+ L+RI
Sbjct: 509 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRI 555
Score = 74.1 bits (174), Expect = 9e-14
Identities = 30/47 (63%), Positives = 41/47 (87%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
DE+RTG YRQLFH L+TGKEDAA+N+ARG++ VG+E++D+ L+RI
Sbjct: 76 DEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRI 122
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 101 bits (242), Expect = 5e-22
Identities = 46/75 (61%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Frame = +2
Query: 86 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGK 253
M+E + IH+GQAGVQ NACWELYCLEHGI+PDG + D+S FFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 254 FVPRVVMIDLEPTPI 298
VPR V +DLEPT +
Sbjct: 61 HVPRAVFVDLEPTVV 75
Score = 72.9 bits (171), Expect = 2e-13
Identities = 29/46 (63%), Positives = 40/46 (86%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNR 674
DE+RTG YRQLFH LITGKEDAA+N+ARG++ +G+E++D+ L+R
Sbjct: 76 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDR 121
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 100 bits (240), Expect = 9e-22
Identities = 46/75 (61%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Frame = +2
Query: 86 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLAFP----DNDNSCGHFFSETGAGK 253
M+E + IH+GQAGVQ NACWELYCLEHGI+PDG + D+S FFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 254 FVPRVVMIDLEPTPI 298
VPR V +DLEPT +
Sbjct: 61 HVPRAVFVDLEPTVV 75
Score = 44.8 bits (101), Expect = 7e-05
Identities = 17/31 (54%), Positives = 27/31 (87%)
Frame = +3
Query: 585 LITGKEDAASNFARGYFGVGREMLDVALNRI 677
LITGKEDAA+N+ARG++ +G++ +D L+R+
Sbjct: 82 LITGKEDAANNYARGHYTIGKQQVDQVLDRL 112
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 99 bits (238), Expect = 2e-21
Identities = 45/75 (60%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Frame = +2
Query: 86 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGK 253
++E + IH+GQAGVQ NACWELYCLEHGI+PDG + D+S FFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 254 FVPRVVMIDLEPTPI 298
VPR V +DLEPT +
Sbjct: 646 HVPRAVFVDLEPTVV 660
Score = 99.1 bits (236), Expect = 3e-21
Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 4/74 (5%)
Frame = +2
Query: 89 KEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGKF 256
+E + +H+GQAGVQ NACWELYCLEHGI+PDG + D+S FFSETGAGK
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 257 VPRVVMIDLEPTPI 298
VPR V +DLEPT +
Sbjct: 126 VPRAVFVDLEPTVV 139
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/72 (62%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Frame = +2
Query: 89 KEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGKF 256
+E + IH+GQAGVQ NACWELYCLEHGI+PDG + D+S FFSETGAGK
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 257 VPRVVMIDLEPT 292
VPR V +DLEPT
Sbjct: 574 VPRAVFVDLEPT 585
Score = 75.4 bits (177), Expect = 4e-14
Identities = 31/47 (65%), Positives = 41/47 (87%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
DE+RTG YRQLFH LITGKEDAA+N+ARG++ VG+E++D+ L+RI
Sbjct: 661 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRI 707
Score = 74.1 bits (174), Expect = 9e-14
Identities = 30/47 (63%), Positives = 41/47 (87%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
DE+RTG YRQLFH LITGKEDAA+N+ARG++ +G+E++D+ L+RI
Sbjct: 140 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 186
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 4/74 (5%)
Frame = +2
Query: 89 KEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGKF 256
+E + IH+GQAGVQ NACWELYCLEHGI+PDG + D+S FFSETGAGK
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 257 VPRVVMIDLEPTPI 298
VPR V +DLEPT +
Sbjct: 61 VPRAVFVDLEPTVV 74
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/47 (65%), Positives = 41/47 (87%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
DE+RTG YRQLFH LITGKEDAA+N+ARG++ VG+E++D+ L+RI
Sbjct: 75 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRI 121
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 98.3 bits (234), Expect = 5e-21
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Frame = +2
Query: 86 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGK 253
M+E + +H+GQAGVQ NACWELYCLEHGI+PDG + D+S FFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 254 FVPRVVMIDLEPTPI 298
VPR V DLEPT +
Sbjct: 61 HVPRAVFCDLEPTVV 75
Score = 75.4 bits (177), Expect = 4e-14
Identities = 31/47 (65%), Positives = 40/47 (85%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
DE+RTG YRQLFH LITGKEDAA+N+ARG++ VG+EM+D L+R+
Sbjct: 76 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRL 122
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 97.9 bits (233), Expect = 7e-21
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 4/74 (5%)
Frame = +2
Query: 89 KEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGKF 256
+E + IH+GQAGVQ NACWELYCLEHGI+PDG + D+S FFSETGAGK
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 257 VPRVVMIDLEPTPI 298
VPR V +DLEP+ I
Sbjct: 480 VPRAVFVDLEPSVI 493
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/58 (62%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Frame = +2
Query: 137 NACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGKFVPRVVMIDLEPTPI 298
NACWELYCLEHGI+PDG + D+S FFSETGAGK VPR V DLEPT +
Sbjct: 3 NACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Score = 72.5 bits (170), Expect = 3e-13
Identities = 28/47 (59%), Positives = 41/47 (87%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
DE+RTG YRQLFH LITGKEDAA+N+ARG++ VG++++++ L+R+
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRL 107
Score = 71.3 bits (167), Expect = 7e-13
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
DEIRTG YRQLFH LITGKEDAA+N+ARG++ VG++ +D L+RI
Sbjct: 494 DEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRI 540
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 97.5 bits (232), Expect = 9e-21
Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 4/74 (5%)
Frame = +2
Query: 89 KEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGKF 256
+E + IH+GQAGVQ NACWELYCLEHGI+PDG + D++ FF+ETGAGK
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 257 VPRVVMIDLEPTPI 298
VPR V +DLEPT I
Sbjct: 433 VPRAVFVDLEPTVI 446
Score = 97.5 bits (232), Expect = 9e-21
Identities = 44/74 (59%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
Frame = +2
Query: 89 KEILHIHIGQAGVQAANACWELYCLEHGIRPDGVL----AFPDNDNSCGHFFSETGAGKF 256
+E + +H+GQAGVQ NACWELYCLEHGI+PDG + D+S FFSETGAGK
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 257 VPRVVMIDLEPTPI 298
VPR V DLEPT +
Sbjct: 866 VPRAVFADLEPTVV 879
Score = 76.6 bits (180), Expect = 2e-14
Identities = 32/47 (68%), Positives = 41/47 (87%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
DE+RTG YRQLFH LITGKEDAA+N+ARG++ VG+EM+D+ L+RI
Sbjct: 880 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRI 926
Score = 74.5 bits (175), Expect = 7e-14
Identities = 30/47 (63%), Positives = 40/47 (85%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
DE+RTG YRQLFH LITGKEDAA+N+ARG++ VG+E +D+ L+R+
Sbjct: 447 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRL 493
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 78.2 bits (184), Expect = 6e-15
Identities = 36/60 (60%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Frame = +2
Query: 86 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLAFPDN----DNSCGHFFSETGAGK 253
M+E L IH+GQAGVQ NACWELYCLEHGI+PDG + + D+S FFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 77.4 bits (182), Expect = 1e-14
Identities = 32/49 (65%), Positives = 43/49 (87%)
Frame = +3
Query: 531 LSDEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
L+DE+RTG YRQLFH LITGKEDAA+N+ARG++ VG+E++D+ L+RI
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRI 59
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/47 (65%), Positives = 41/47 (87%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
DEIRTG YRQLFH L++GKEDAA+N+ARG++ VG+E +D+AL+RI
Sbjct: 41 DEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRI 87
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +2
Query: 209 DNSCGHFFSETGAGKFVPRVVMIDLEPTPI 298
D+S FF+ETGAGK VPR V +DLEPT I
Sbjct: 11 DDSFNTFFAETGAGKHVPRAVFVDLEPTVI 40
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 72.9 bits (171), Expect = 2e-13
Identities = 30/46 (65%), Positives = 40/46 (86%)
Frame = +3
Query: 540 EIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
E+RTG YRQLFH LITGKEDAA+N+ARG++ VG+E++D+ L+RI
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRI 47
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 72.9 bits (171), Expect = 2e-13
Identities = 30/46 (65%), Positives = 40/46 (86%)
Frame = +3
Query: 540 EIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
E+RTG YRQLFH LITGKEDAA+N+ARG++ VG+E++D+ L+RI
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRI 47
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 70.9 bits (166), Expect = 9e-13
Identities = 30/46 (65%), Positives = 40/46 (86%)
Frame = +3
Query: 540 EIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
EIRTG YRQLFH L++GKEDAA+N+ARG++ VG+E +D+AL+RI
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRI 47
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 67.7 bits (158), Expect = 8e-12
Identities = 25/47 (53%), Positives = 41/47 (87%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
DE+RTG+YR L+H +I+GKEDAA+N+ARG++ +G+EM++V +++I
Sbjct: 987 DEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKI 1033
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +2
Query: 233 SETGAGKFVPRVVMIDLEPTPI 298
SE AGK+VPR V++DLEPT I
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVI 986
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = +3
Query: 540 EIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALNRI 677
E+R G YR LFH LITGKEDAA+N+ARG++ VG+E +D+ L +I
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKI 47
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 58.4 bits (135), Expect = 5e-09
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +2
Query: 65 IYSD*L--KMKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLAFPDND---NSCGHF 229
+YS L KM+EI+H GQ G Q WE+ EHGI P G D+D +
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTY-HGDSDLQLERINVY 263
Query: 230 FSETGAGKFVPRVVMIDLEP 289
++E GK+VPR V++DLEP
Sbjct: 264 YNEATGGKYVPRAVLVDLEP 283
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALN 671
D +R+G + Q+F + + G+ A +N+A+G++ G E++D L+
Sbjct: 287 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 331
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +2
Query: 86 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLAFPDND---NSCGHFFSETGAGKF 256
M+EI+H GQ G Q WE+ EHGI P G D+D +++E GK+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTY-HGDSDLQLERINVYYNEATGGKY 59
Query: 257 VPRVVMIDLEP 289
VPR +++DLEP
Sbjct: 60 VPRAILVDLEP 70
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALN 671
D +R+G + Q+F + + G+ A +N+A+G++ G E++D L+
Sbjct: 74 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +2
Query: 86 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLAFPDND---NSCGHFFSETGAGKF 256
M+EI+H GQ G Q WE+ EHGI P G D+D +++E GK+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTY-HGDSDLQLERINVYYNEATGGKY 59
Query: 257 VPRVVMIDLEP 289
VPR +++DLEP
Sbjct: 60 VPRAILVDLEP 70
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +2
Query: 86 MKEILHIHIGQAGVQAANACWELYCLEHGIRPDGVLAFPDND---NSCGHFFSETGAGKF 256
M+EI+ + GQ G Q WE+ EHGI P G D+D +++E GK+
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTY-HGDSDLQLERINVYYNEATGGKY 59
Query: 257 VPRVVMIDLEP 289
VPR V+IDLEP
Sbjct: 60 VPRSVLIDLEP 70
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALN 671
D +R+G + Q+F + + G+ A +N+A+G++ G E++D L+
Sbjct: 74 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLD 118
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +3
Query: 537 DEIRTGVYRQLFHSSSLITGKEDAASNFARGYFGVGREMLDVALN 671
D +R+G + Q+F + + G+ A +N+A+G++ G E++D L+
Sbjct: 19 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 63
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +2
Query: 248 GKFVPRVVMIDLEP 289
GK+VPR V++DLEP
Sbjct: 2 GKYVPRAVLVDLEP 15
>SB_45852| Best HMM Match : I-set (HMM E-Value=0)
Length = 1122
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 254 IFQHRFH*KNVHNYYHYQEMLELH 183
IF H H + H++YH+Q+ + H
Sbjct: 1028 IFNHYHHHRRRHHHYHHQQQHQFH 1051
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 546 RTGVYRQLFHSSSLITGKEDAASNFARGYF 635
+TG YR L H++S+I KE S F RG F
Sbjct: 262 KTGQYRGLLHAASVIYQKEGIRS-FYRGLF 290
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,869,977
Number of Sequences: 59808
Number of extensions: 389650
Number of successful extensions: 780
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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