Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4b03
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.9  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   6.5  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 545  EASSETLTQRLLGRAASSGRADDNEETIKL 634
            EA  +   + LLG   S G +DD+E +I++
Sbjct: 1082 EAKRKAKQKSLLGFLQSGGTSDDDEGSIEI 1111


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 545  EASSETLTQRLLGRAASSGRADDNEETIKL 634
            EA  +   + LLG   S G +DD+E +I++
Sbjct: 1082 EAKRKAKQKSLLGFLQSGGTSDDDEGSIEI 1111


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 545  EASSETLTQRLLGRAASSGRADDNEETIKL 634
            EA  +   + LLG   S G +DD+E +I++
Sbjct: 1082 EAKRKAKQKSLLGFLQSGGTSDDDEGSIEI 1111


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 545  EASSETLTQRLLGRAASSGRADDNEETIKL 634
            EA  +   + LLG   S G +DD+E +I++
Sbjct: 1082 EAKRKAKQKSLLGFLQSGGTSDDDEGSIEI 1111


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 218 LTFSMYLWVPCTLCISVICTSEGTAAAYQQSALYTVHTVS 99
           L F + LW+   L   + C +      Y+   LYT+  +S
Sbjct: 138 LFFVILLWISFFLNFMLHCNNTTWRCLYRWIVLYTLSKMS 177


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 406 PGSAKRSDPGPR 441
           PGS +RS P PR
Sbjct: 412 PGSDQRSTPSPR 423


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/23 (30%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -2

Query: 121 FTRFT-QFLFHCIIQKCICLFFY 56
           F  FT   LF+C++   +C++++
Sbjct: 219 FIIFTIHLLFYCVLIILLCIYYF 241


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 254 PFLIRDLPGPTRLTFSMYLW 195
           PFL+ +L   T +T+  ++W
Sbjct: 399 PFLVANLAFVTIVTYETFVW 418


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,792
Number of Sequences: 336
Number of extensions: 3153
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)