Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4b02
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41994-9|AAK31523.1|  786|Caenorhabditis elegans Hypothetical pr...    33   0.21 
M77697-3|AAA27898.3|  616|Caenorhabditis elegans Hypothetical pr...    32   0.49 
Z93391-7|CAB07685.3|  405|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF067613-11|AAN73862.2|  334|Caenorhabditis elegans Serpentine r...    29   2.6  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF099925-14|AAX55690.1|  679|Caenorhabditis elegans Calcium bind...    29   4.5  
U97405-1|AAB53007.1|  327|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cycl...    28   6.0  
AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor typ...    28   6.0  
AF047663-1|AAC04453.2|  322|Caenorhabditis elegans Delta/serrate...    28   7.9  

>U41994-9|AAK31523.1|  786|Caenorhabditis elegans Hypothetical
           protein F59A6.3 protein.
          Length = 786

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 23/59 (38%), Positives = 33/59 (55%)
 Frame = +1

Query: 337 AARTSASLQRSRSSGPRTRTAPAKS*TSCTMGAIR*RTSTGPATRTSLSTYSPGSTRIT 513
           A+ TS S Q S +SGP T + P+ +  S         T++GP+T +  ST S GST+ T
Sbjct: 543 ASTTSGSTQ-STTSGPSTSSGPSTASRSTVSTTSGPSTTSGPSTTSGPSTTS-GSTKST 599


>M77697-3|AAA27898.3|  616|Caenorhabditis elegans Hypothetical
           protein B0303.4 protein.
          Length = 616

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 22/61 (36%), Positives = 30/61 (49%)
 Frame = +3

Query: 303 LDTYEIETARNGCSNLSLPSEEPVIRATYKNSTGKIVNVLYYGSDSVKNFYRSCDKDVAK 482
           LD  E+E         +  SE PVI      S GKI+  L + +D+ KN Y S +  VAK
Sbjct: 311 LDDQEVEAQPEQVLQETKESEFPVIEGP---SEGKILIKLKFMNDTEKNTYASLEDTVAK 367

Query: 483 Y 485
           +
Sbjct: 368 F 368


>Z93391-7|CAB07685.3|  405|Caenorhabditis elegans Hypothetical
           protein W04G5.9 protein.
          Length = 405

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 21/71 (29%), Positives = 36/71 (50%)
 Frame = +1

Query: 301 NSIHTK*KPLGTAARTSASLQRSRSSGPRTRTAPAKS*TSCTMGAIR*RTSTGPATRTSL 480
           +++ T  KP+ TA R++A +  +++S      AP K+ T+ T+      T+T P T T  
Sbjct: 105 STLKTTTKPVITATRSTARITTTKASTLEPPEAPTKASTARTISTT--ETTTSPPTTTVT 162

Query: 481 STYSPGSTRIT 513
              +  ST  T
Sbjct: 163 PRTTRSSTART 173


>AF067613-11|AAN73862.2|  334|Caenorhabditis elegans Serpentine
           receptor, class z protein19 protein.
          Length = 334

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/79 (16%), Positives = 34/79 (43%)
 Frame = +3

Query: 69  YNVLSNNMETVVFFLIITSFFCAINCRISRSSEAQCLSYYNNEENFDLDTLSGQMYAVYY 248
           Y++  N++E  ++ L I  +FC++   +  +     L +           L+   + +Y+
Sbjct: 94  YDIFGNSIENAIYGLTIVMWFCSVTVLVGLTEAFNILLFL----------LAVSRFTIYF 143

Query: 249 WPPNQRTRNACEVQTFKKL 305
           WP  ++     +    K++
Sbjct: 144 WPTTEKVVKILQTNGHKRV 162


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 192  NEENFDLDTLSGQMYAVYYWPPNQRTRNACEVQTFKKLDTYEIETARNGC 341
            N E  D+DTLS + Y+ +     QR    C+    ++++  E E  R  C
Sbjct: 1722 NCETVDVDTLSDKEYSRFQKECRQRPEFECKDAKVERMNAQEYEEYRKKC 1771


>AF099925-14|AAX55690.1|  679|Caenorhabditis elegans Calcium binding
           protein homologprotein 1, isoform d protein.
          Length = 679

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/69 (24%), Positives = 32/69 (46%)
 Frame = +1

Query: 298 RNSIHTK*KPLGTAARTSASLQRSRSSGPRTRTAPAKS*TSCTMGAIR*RTSTGPATRTS 477
           R  +  K   L T   T+  +Q + +   +++T      T+ T+      TST P+T + 
Sbjct: 545 REVVAPKATVLKTTVPTTTVIQTTETPSTKSKTTKKVKVTTTTVSTTTITTSTPPSTTSP 604

Query: 478 LSTYSPGST 504
            +T +P +T
Sbjct: 605 TTTVTPVAT 613


>U97405-1|AAB53007.1|  327|Caenorhabditis elegans Hypothetical
           protein T09B4.5a protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 27/108 (25%), Positives = 44/108 (40%)
 Frame = +1

Query: 187 TTTKRTLIWIRYRDKCTRSITGPRIRERGTPAKYKPSRNSIHTK*KPLGTAARTSASLQR 366
           T+  R  +     +K T+    P   +    A   P+R       K    +A  SA+  R
Sbjct: 10  TSRSRNAVSAPSSEKKTKMSKSPSPAKSARKASKSPARARTSNVKKTPSRSASKSATRGR 69

Query: 367 SRSSGPRTRTAPAKS*TSCTMGAIR*RTSTGPATRTSLSTYSPGSTRI 510
           + S  P+T +    S ++ +    R R +   A+R S ST S  ST +
Sbjct: 70  TASKTPKTPSKTPSSASARSRSRSRGRPTN--ASRLSASTPSASSTSV 115


>AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cyclase
           protein 23 protein.
          Length = 1043

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 231 MYAVYYWPPNQRT-RNACEVQTFKKLDTYEIETARNGCSNLSL 356
           +YA +Y PPN  T R  CE++     +    +T  NGC  L +
Sbjct: 354 VYAAFYVPPNSDTVRKVCELEPVMLTNCDGTKTG-NGCYELQV 395


>AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor type
           guanyly cyclase protein.
          Length = 1073

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 231 MYAVYYWPPNQRT-RNACEVQTFKKLDTYEIETARNGCSNLSL 356
           +YA +Y PPN  T R  CE++     +    +T  NGC  L +
Sbjct: 384 VYAAFYVPPNSDTVRKVCELEPVMLTNCDGTKTG-NGCYELQV 425


>AF047663-1|AAC04453.2|  322|Caenorhabditis elegans
           Delta/serrate/lag-2 domain protein2 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +3

Query: 339 CSNLSLPSEEPVIRATYKNSTGKIVNVLYYGSDSVKN-FY 455
           C N++ P E P  R     + GKI  VL    + VKN FY
Sbjct: 209 CQNVTFPPEMPKFRTVMLGANGKIFKVL-ENKNLVKNEFY 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,563,872
Number of Sequences: 27780
Number of extensions: 316416
Number of successful extensions: 1108
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)