Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4a21
(755 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q23J86 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A2CE83 Cluster: Novel protein; n=2; Danio rerio|Rep: No... 35 1.9
UniRef50_Q8ZUL8 Cluster: Putative uncharacterized protein PAE271... 35 1.9
UniRef50_Q1FIV0 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_A6LNV9 Cluster: S-layer domain protein; n=1; Thermosiph... 35 2.5
UniRef50_UPI00006CBAB9 Cluster: hypothetical protein TTHERM_0050... 34 3.3
UniRef50_Q3CJQ7 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_Q02455 Cluster: Protein MLP1; n=2; Saccharomyces cerevi... 34 3.3
UniRef50_UPI0000D56202 Cluster: PREDICTED: similar to CG12213-PB... 34 4.4
UniRef50_UPI00006CC43E Cluster: hypothetical protein TTHERM_0013... 34 4.4
UniRef50_UPI000069ED2F Cluster: UPI000069ED2F related cluster; n... 34 4.4
UniRef50_Q64RQ0 Cluster: Putative uncharacterized protein; n=2; ... 34 4.4
UniRef50_Q18D11 Cluster: Putative uncharacterized protein; n=2; ... 34 4.4
UniRef50_Q8IE93 Cluster: Putative uncharacterized protein MAL13P... 34 4.4
UniRef50_A2ETJ9 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_A0CYQ5 Cluster: Chromosome undetermined scaffold_31, wh... 34 4.4
UniRef50_Q58679 Cluster: Uncharacterized protein MJ1283; n=1; Me... 34 4.4
UniRef50_Q7T3C3 Cluster: Protein CutA homolog precursor; n=2; Da... 34 4.4
UniRef50_UPI00006CC4C7 Cluster: hypothetical protein TTHERM_0013... 33 5.8
UniRef50_Q5XK80 Cluster: LOC494853 protein; n=1; Xenopus laevis|... 33 7.6
UniRef50_Q4U2V3 Cluster: ATP/GTP binding protein 1; n=2; Danio r... 33 7.6
UniRef50_Q9KAZ0 Cluster: BH2146 protein; n=1; Bacillus haloduran... 33 7.6
UniRef50_Q045T4 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_A7BMY8 Cluster: Putative uncharacterized protein; n=2; ... 33 7.6
UniRef50_A5TVU3 Cluster: Possible cation ABC superfamily ATP bin... 33 7.6
>UniRef50_Q23J86 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 577
Score = 35.5 bits (78), Expect = 1.4
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 355 DLNGITRNINDI-SRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETKDF 531
DL N+N+I S L+L KNN DL I S+FSQ LPK++ ++ L N + D
Sbjct: 390 DLGVYFTNMNNIKSLELNLEKNNIGDLGI--SQFSQSLPKIK-NLQTLNLNLNNNKITDQ 446
Query: 532 GWN 540
G N
Sbjct: 447 GMN 449
>UniRef50_A2CE83 Cluster: Novel protein; n=2; Danio rerio|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 311
Score = 35.1 bits (77), Expect = 1.9
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 322 EYHCHTCNTKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQME 489
E H + + N + + + +NL LM E +SK QE+ KL+GQ+E
Sbjct: 211 EMHNKKLQEEKEANDLEAMVQSVEQNLQLMTKRAVKAENNISKLKQEMLKLQGQLE 266
>UniRef50_Q8ZUL8 Cluster: Putative uncharacterized protein PAE2717;
n=2; Pyrobaculum|Rep: Putative uncharacterized protein
PAE2717 - Pyrobaculum aerophilum
Length = 667
Score = 35.1 bits (77), Expect = 1.9
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 421 YEDLEIKLSKF---SQELPKLEGQMEILEALANTVETK--DFGWNPNSPLLLNAERIQTH 585
+EDL +L K+ S P+ EGQ E+L ALA + + + FG P P + E +
Sbjct: 159 HEDLARELKKWHSPSPGEPRREGQAEVLAALAASFDEEYGGFGGAPKFPPITQLELLMMR 218
Query: 586 SVFDS-GNFSKVAKQNIFKPDLG 651
+D G + K+A++ + LG
Sbjct: 219 HFYDGVGIYGKMAERTLDAMALG 241
>UniRef50_Q1FIV0 Cluster: Putative uncharacterized protein; n=1;
Clostridium phytofermentans ISDg|Rep: Putative
uncharacterized protein - Clostridium phytofermentans
ISDg
Length = 1361
Score = 34.7 bits (76), Expect = 2.5
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 343 NTKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEIL-EALANTVE 519
N + + N + NI ++ L+ +N+E+++ +L + + +LE + EIL E + +
Sbjct: 258 NKELEHNKLLENIKNLQNKLNQSVDNHENIKKELLQSKSHIQELEKEKEILTEGHNDLIN 317
Query: 520 TKDFGWNPNSPLLLNAERIQTHSVFDSGNFSKVAKQNIFK 639
+ N L + E ++T S K + +N+ K
Sbjct: 318 RLEEETGKNQGLNNSLEELKTQSHHMKQELEKASSENLLK 357
>UniRef50_A6LNV9 Cluster: S-layer domain protein; n=1; Thermosipho
melanesiensis BI429|Rep: S-layer domain protein -
Thermosipho melanesiensis BI429
Length = 361
Score = 34.7 bits (76), Expect = 2.5
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 343 NTKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILE 498
N K DL ++ ++++ +L KN+ + L I +S EL L+ ++E+LE
Sbjct: 112 NLKNDLQVMSSELSELKTSLVNTKNDVKSLSIDISSLKNELETLKSKIEVLE 163
>UniRef50_UPI00006CBAB9 Cluster: hypothetical protein TTHERM_00502550;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00502550 - Tetrahymena thermophila SB210
Length = 2443
Score = 34.3 bits (75), Expect = 3.3
Identities = 20/79 (25%), Positives = 36/79 (45%)
Frame = +1
Query: 343 NTKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVET 522
N + +LN N+N+I L+ +NN + L+ L L+ Q+ IL+ N +
Sbjct: 1630 NQQNNLNYQQNNLNNIPNTLNYQQNNLNYQQNNLNNLPNTLNNLQNQVPILQNQQNQISI 1689
Query: 523 KDFGWNPNSPLLLNAERIQ 579
+ F N ++ N + Q
Sbjct: 1690 EKFQANQRGLIIPNQQLSQ 1708
>UniRef50_Q3CJQ7 Cluster: Putative uncharacterized protein; n=1;
Thermoanaerobacter ethanolicus ATCC 33223|Rep: Putative
uncharacterized protein - Thermoanaerobacter ethanolicus
ATCC 33223
Length = 80
Score = 34.3 bits (75), Expect = 3.3
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 358 LNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQME 489
LN + +N I L ++N + LE+K ++F + + KLE +M+
Sbjct: 7 LNLVLERLNSIDTGLENLENRIDRLEVKFTEFEKRIDKLEQRMD 50
>UniRef50_Q02455 Cluster: Protein MLP1; n=2; Saccharomyces
cerevisiae|Rep: Protein MLP1 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 1875
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +1
Query: 316 MLEYHCHTCNTKCDLN--GITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQME 489
+L+ N + DL G+ + D + +S+++NN +++E S++ +L K++ ++
Sbjct: 971 LLKEQMFNLNNELDLQKKGMEKEKADFKKRISILQNNNKEVEAVKSEYESKLSKIQNDLD 1030
Query: 490 ILEALANTVE 519
ANT +
Sbjct: 1031 QQTIYANTAQ 1040
>UniRef50_UPI0000D56202 Cluster: PREDICTED: similar to CG12213-PB,
isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG12213-PB, isoform B - Tribolium castaneum
Length = 454
Score = 33.9 bits (74), Expect = 4.4
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 382 NDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETKD 528
N + ++ +L++ YEDL+ KL + QEL ++ E L+ V++K+
Sbjct: 112 NSLQQHFNLLQTQYEDLQAKLKEVEQELKDVKSSKEGLKTKYLEVQSKN 160
>UniRef50_UPI00006CC43E Cluster: hypothetical protein
TTHERM_00136190; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00136190 - Tetrahymena
thermophila SB210
Length = 973
Score = 33.9 bits (74), Expect = 4.4
Identities = 26/114 (22%), Positives = 52/114 (45%)
Frame = +1
Query: 295 LLSVIYLMLEYHCHTCNTKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKL 474
L + I L+ E + N + T I +++S + +EDL+ KL++ QE +
Sbjct: 227 LKNQISLLQENNLQHKNKLQEYQSQTNKNEQIKKHVSELNKQFEDLQEKLNQIEQEKDEY 286
Query: 475 EGQMEILEALANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFSKVAKQNIF 636
+ Q+E NT++ + N L + + Q + + + ++V KQ I+
Sbjct: 287 KTQLEKKSIQINTIQQINKNLKGNLEQLQSKIQQQEAILAEFQSKAEVEKQTIY 340
>UniRef50_UPI000069ED2F Cluster: UPI000069ED2F related cluster; n=1;
Xenopus tropicalis|Rep: UPI000069ED2F UniRef100 entry -
Xenopus tropicalis
Length = 115
Score = 33.9 bits (74), Expect = 4.4
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +1
Query: 79 KIVKKNRKGTAINELLK*LNTIWKKRTMDRARRNRRGRYQSQNNSTADQYNTRTTK 246
KIVKKN +G N + N+ +++ ++N RGR Q NS Q N+R TK
Sbjct: 63 KIVKKNSRGRQKNSRGRQKNSRGRQKNSRGRQKNSRGR---QKNSRGRQKNSRATK 115
>UniRef50_Q64RQ0 Cluster: Putative uncharacterized protein; n=2;
Bacteroides fragilis|Rep: Putative uncharacterized
protein - Bacteroides fragilis
Length = 404
Score = 33.9 bits (74), Expect = 4.4
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +1
Query: 373 RNINDISRNL-SLMKN--NYEDLEIKLSKFSQELPKLEGQMEILEALANTVETKDFGWNP 543
RN+ D+ RN+ S KN NY+ + KL + ++ +E + + E L T E + F P
Sbjct: 133 RNVIDLKRNIDSTFKNEPNYQIKKKKLVRLDEKRRDIEALIRVSEELLVTEEDRFFRRVP 192
Query: 544 NSPLLLNAE--RIQTHSVFDSGNFSKVAKQNI 633
+ L+L RIQ + F N ++ KQ I
Sbjct: 193 DDELVLVVANVRIQLNECFH--NLIEIQKQII 222
>UniRef50_Q18D11 Cluster: Putative uncharacterized protein; n=2;
Clostridium difficile|Rep: Putative uncharacterized
protein - Clostridium difficile (strain 630)
Length = 467
Score = 33.9 bits (74), Expect = 4.4
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = +1
Query: 199 SQNNSTADQYNTRTTKPWSFLSGFYSFMIMCCLLSVIYLMLEYHCHTCNTKCDLNGITRN 378
S+N ++D ++ K +L Y +I+ LL + Y + K N T+N
Sbjct: 229 SKNQKSSDSNKKKSIKKNKYL---YIAIILGILLVGQSIYSSYKMNNLTDKISKNNETKN 285
Query: 379 INDISRNLSLMKNNYEDLE--IKLSKFSQELPKLEGQMEILEALANTVETKD 528
I NL+ +NN E+ E K S ++ + + ++ ++ NTVE +D
Sbjct: 286 EESIDSNLTKKENNIEENEDMSKASNINKSNKNINKEDDV-KSKKNTVENED 336
>UniRef50_Q8IE93 Cluster: Putative uncharacterized protein
MAL13P1.124; n=1; Plasmodium falciparum 3D7|Rep:
Putative uncharacterized protein MAL13P1.124 -
Plasmodium falciparum (isolate 3D7)
Length = 1510
Score = 33.9 bits (74), Expect = 4.4
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 15/180 (8%)
Frame = +1
Query: 73 NEKIVKKNRKGTAINELLK*LNTIWKKRTMDRARRNRRGRYQS-----QNNSTADQYNT- 234
N + + N+K T N +N KK D N Q+ QNN+ +QYN+
Sbjct: 426 NNRFNQFNQKNTNNNIKSVSINHKKKKNNNDNNNNNNNSSNQTNFSFNQNNNPVEQYNSF 485
Query: 235 -RTTKPWSFLSGFYSFMIMCCLLSVIYLMLEYHCHTCNTKCDLNGITRNINDISRNLSLM 411
T + + G+ ++C Y + + CH T + I N D+ +
Sbjct: 486 NNTNRNSNSCYGYNENEVVCNKSD--YSIFD--CH--GTYWENLNIEENNADV-----FV 534
Query: 412 KNNYEDLEIKLSK-------FSQELPKL-EGQMEILEALANTVETKDFGWNPNSPLLLNA 567
KNNYE++E+ + + +E+ K+ + +M+ + ++ +G N+PL+L A
Sbjct: 535 KNNYEEIEVGVERKNVIREYSKEEMDKINKNKMDFMNTFLFFIQLLFYGIKKNNPLILLA 594
>UniRef50_A2ETJ9 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 482
Score = 33.9 bits (74), Expect = 4.4
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Frame = +1
Query: 331 CHTCNTKCDLNGITRNINDI--------SRNLSLMKNNYEDLEIKLSKFSQELPKLEGQM 486
C N+ C+LN ++ +IND+ S N+S + N E LE+K +F++ L K +
Sbjct: 52 CILSNSACNLNQLSMDINDVASIFNSGNSSNISALMNRIESLELKPIQFAKILFKND--- 108
Query: 487 EILEALANTVE 519
++E + N V+
Sbjct: 109 ILIEPILNAVQ 119
>UniRef50_A0CYQ5 Cluster: Chromosome undetermined scaffold_31, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_31,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 686
Score = 33.9 bits (74), Expect = 4.4
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +1
Query: 256 FLSGFYSFMIMCCLLSVIYLMLEYHCHTCNTKCDLNGITRNINDISRNLSLMKNNYEDLE 435
F S F FM + +++IY+ + N + D +TR INDIS N ++ + +
Sbjct: 29 FTSFFGGFMSLVVWIAMIYVFISQGVDLVN-RVDQQAVTRTINDISPNARVLNISNFMIG 87
Query: 436 IKLSKFSQELPKLEGQ 483
IKL Q L Q
Sbjct: 88 IKLDDPLQALMNTTNQ 103
>UniRef50_Q58679 Cluster: Uncharacterized protein MJ1283; n=1;
Methanocaldococcus jannaschii|Rep: Uncharacterized
protein MJ1283 - Methanococcus jannaschii
Length = 220
Score = 33.9 bits (74), Expect = 4.4
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +1
Query: 352 CDLNGITRNINDISRNLSLMKNNYEDLEIKLS 447
C +N +T N N +S+NL ++KNNY+D I+++
Sbjct: 55 CLINSLTSNSN-LSKNLDMLKNNYKDEGIEIN 85
>UniRef50_Q7T3C3 Cluster: Protein CutA homolog precursor; n=2; Danio
rerio|Rep: Protein CutA homolog precursor - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 150
Score = 33.9 bits (74), Expect = 4.4
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -1
Query: 662 SQSIPRSGLKIFC---LATLLKFPESNTECV*ILSAFRSKGEFGFH 534
S ++PRSG +FC + TL +P T V I SAF K G+H
Sbjct: 2 SSAVPRSGFVVFCVLLVVTLALYPVLRTLGVQIYSAFTGKYVSGYH 47
>UniRef50_UPI00006CC4C7 Cluster: hypothetical protein TTHERM_00138580;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00138580 - Tetrahymena thermophila SB210
Length = 1398
Score = 33.5 bits (73), Expect = 5.8
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +1
Query: 343 NTKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVET 522
N+ NGI+ N+ D++ L K ++ + + + QEL +++ Q L N
Sbjct: 1104 NSPQGANGISLNLMDLANQLQERKQQFQQRQKEKQEQEQELERVQKQQYELSQKQNQASQ 1163
Query: 523 KDFGWNPNSPLLLN 564
F N + L+LN
Sbjct: 1164 DMFNRNEDELLMLN 1177
>UniRef50_Q5XK80 Cluster: LOC494853 protein; n=1; Xenopus
laevis|Rep: LOC494853 protein - Xenopus laevis (African
clawed frog)
Length = 537
Score = 33.1 bits (72), Expect = 7.6
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +1
Query: 391 SRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETKDFGWNPNSPLLLNAE 570
S L K YE L++ SK + + +L+ ++ +L++ VETKD L + E
Sbjct: 311 SGECDLWKEEYEKLKMDWSKLTSKHSELKNELYVLQSKLQWVETKDLQMQQFQSRLHSLE 370
Query: 571 RIQT 582
R +T
Sbjct: 371 REKT 374
>UniRef50_Q4U2V3 Cluster: ATP/GTP binding protein 1; n=2; Danio
rerio|Rep: ATP/GTP binding protein 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 1153
Score = 33.1 bits (72), Expect = 7.6
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = +1
Query: 436 IKLSKFSQELPKLEGQMEILEALANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFSK 615
++ +K Q++ +L +IL+ + ++ N +SPL N E ++ +S F+SGN K
Sbjct: 596 VQRTKIFQDIERLIHSSDILDKVVYDLD------NQSSPLTDNGESLKFNSKFESGNLRK 649
Query: 616 VAKQNIFKPDL 648
+ F+ DL
Sbjct: 650 AIQVRKFEYDL 660
>UniRef50_Q9KAZ0 Cluster: BH2146 protein; n=1; Bacillus
halodurans|Rep: BH2146 protein - Bacillus halodurans
Length = 823
Score = 33.1 bits (72), Expect = 7.6
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +1
Query: 337 TCNTKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTV 516
T + + D NGI ++ +S N+S + E + +L QE+ L ++ L + V
Sbjct: 327 TASFQADENGINQSFEQVSSNMSETLQSLERFDEQLETSEQEIAHLSHSVDTLPGIMENV 386
Query: 517 ETKDFGWNPNSPLL 558
+ + W N L+
Sbjct: 387 DPR---WKDNDDLV 397
>UniRef50_Q045T4 Cluster: Putative uncharacterized protein; n=1;
Lactobacillus gasseri ATCC 33323|Rep: Putative
uncharacterized protein - Lactobacillus gasseri (strain
ATCC 33323 / DSM 20243)
Length = 476
Score = 33.1 bits (72), Expect = 7.6
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 328 HCHTCNTKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLE-GQMEILEAL 504
H H ++ +N +T+ IND+S LS K ++ ++ + S+ + +L+ Q +++A
Sbjct: 138 HDHLAQSQNRVNDLTKTINDLSTKLSNAKTEQATVQGQIGQVSKHVDELKAAQPALVQAR 197
Query: 505 ANTVE 519
NT +
Sbjct: 198 DNTAK 202
>UniRef50_A7BMY8 Cluster: Putative uncharacterized protein; n=2;
Beggiatoa|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 122
Score = 33.1 bits (72), Expect = 7.6
Identities = 12/46 (26%), Positives = 28/46 (60%)
Frame = +1
Query: 349 KCDLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQM 486
K D+ + ++IN +S+N+ LM+N+ + + + ++ S + L G +
Sbjct: 57 KTDMLSMAQDINKMSKNMGLMENSMKMMSVDMTNMSYQFTSLNGSV 102
>UniRef50_A5TVU3 Cluster: Possible cation ABC superfamily ATP
binding cassette transporter binding protein; n=3;
Fusobacterium nucleatum|Rep: Possible cation ABC
superfamily ATP binding cassette transporter binding
protein - Fusobacterium nucleatum subsp. polymorphum
ATCC 10953
Length = 292
Score = 33.1 bits (72), Expect = 7.6
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +1
Query: 367 ITRNINDISRNL-SLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETKDFGWNP 543
+ R +N I+R+L L N +E ++KF+ +L K+E E E L E + +
Sbjct: 138 LVRMVNIIARDLIKLYPQNKAKIEKNITKFTADLLKIEN--EANEKLLAVGEAEVISLSE 195
Query: 544 NSPLLLNAERIQTHSV-FDSGNFSKVAK 624
N LN I T V +DS N + K
Sbjct: 196 NLQYFLNDMNIYTEYVDYDSVNAQNIVK 223
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,568,283
Number of Sequences: 1657284
Number of extensions: 13127770
Number of successful extensions: 38403
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 36615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38346
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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