Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4a21
         (755 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06825-1|CAA29971.1|  284|Homo sapiens protein ( Human mRNA for ...    33   1.5  
M12126-1|AAA61229.1|  131|Homo sapiens TPM2 protein.                   33   1.5  
AL133410-4|CAI10977.1|  284|Homo sapiens tropomyosin 2 (beta) pr...    33   1.5  
AL133410-3|CAI10976.1|  322|Homo sapiens tropomyosin 2 (beta) pr...    33   1.5  
AL133410-1|CAI10975.1|  284|Homo sapiens tropomyosin 2 (beta) pr...    33   1.5  
AB040942-1|BAA96033.1| 1326|Homo sapiens KIAA1509 protein protein.     31   5.9  
BC046159-1|AAH46159.1|  272|Homo sapiens Similar to PTPRF intera...    30   7.8  
BC022873-1|AAH22873.1|  292|Homo sapiens Unknown (protein for IM...    30   7.8  
AF034802-1|AAC26103.1| 1005|Homo sapiens liprin-beta1 protein.         30   7.8  

>X06825-1|CAA29971.1|  284|Homo sapiens protein ( Human mRNA for
           skeletal beta-tropomyosin. ).
          Length = 284

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +1

Query: 385 DISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 525
           D+   L ++ NN + LE +  K+S +  K E ++++LE      ET+
Sbjct: 192 DLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETR 238


>M12126-1|AAA61229.1|  131|Homo sapiens TPM2 protein.
          Length = 131

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +1

Query: 385 DISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 525
           D+   L ++ NN + LE +  K+S +  K E ++++LE      ET+
Sbjct: 39  DLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETR 85


>AL133410-4|CAI10977.1|  284|Homo sapiens tropomyosin 2 (beta)
           protein.
          Length = 284

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +1

Query: 385 DISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 525
           D+   L ++ NN + LE +  K+S +  K E ++++LE      ET+
Sbjct: 192 DLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETR 238


>AL133410-3|CAI10976.1|  322|Homo sapiens tropomyosin 2 (beta)
           protein.
          Length = 322

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +1

Query: 385 DISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 525
           D+   L ++ NN + LE +  K+S +  K E ++++LE      ET+
Sbjct: 192 DLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETR 238


>AL133410-1|CAI10975.1|  284|Homo sapiens tropomyosin 2 (beta)
           protein.
          Length = 284

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +1

Query: 385 DISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 525
           D+   L ++ NN + LE +  K+S +  K E ++++LE      ET+
Sbjct: 192 DLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETR 238


>AB040942-1|BAA96033.1| 1326|Homo sapiens KIAA1509 protein protein.
          Length = 1326

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +1

Query: 322 EYHCHTCNTKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQE---LPKLEGQME 489
           E H HT   K  LN     +N        +K  ++ ++I L+K       L +L+G +E
Sbjct: 572 ELHAHTKELKTSLNNAQLELNRWQARFDELKEQHQTMDISLTKLDNHCELLSRLKGNLE 630


>BC046159-1|AAH46159.1|  272|Homo sapiens Similar to PTPRF
           interacting protein, binding protein 1 (liprin beta 1)
           protein.
          Length = 272

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +1

Query: 355 DLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 525
           D  G+ + IND+   +S M +     E KL     EL  L+ Q+E  E+    ++ K
Sbjct: 192 DTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKDELASLKEQLEEKESEVKRLQEK 248


>BC022873-1|AAH22873.1|  292|Homo sapiens Unknown (protein for
           IMAGE:4102924) protein.
          Length = 292

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +1

Query: 355 DLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 525
           D  G+ + IND+   +S M +     E KL     EL  L+ Q+E  E+    ++ K
Sbjct: 199 DTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKDELASLKEQLEEKESEVKRLQEK 255


>AF034802-1|AAC26103.1| 1005|Homo sapiens liprin-beta1 protein.
          Length = 1005

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +1

Query: 355 DLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 525
           D  G+ + IND+   +S M +     E KL     EL  L+ Q+E  E+    ++ K
Sbjct: 199 DTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKDELASLKEQLEEKESEVKRLQEK 255


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,855,402
Number of Sequences: 237096
Number of extensions: 1886719
Number of successful extensions: 9279
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9279
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)