Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4a14
(709 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 34 0.017
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 32 0.070
SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|... 32 0.092
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 31 0.12
SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large... 31 0.16
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 30 0.37
SPCC338.04 |cid2||caffeine induced death protein Cid2|Schizosacc... 29 0.65
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 29 0.65
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 1.1
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 28 1.1
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 28 1.1
SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase |Schi... 28 1.1
SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog |Schizosacchar... 28 1.5
SPCC1672.02c |sap1||switch-activating protein Sap1|Schizosacchar... 27 2.6
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 27 2.6
SPBC405.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.6
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 2.6
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.5
SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyc... 27 3.5
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 27 3.5
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 26 4.6
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 4.6
SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces ... 26 6.1
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 26 6.1
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 26 6.1
SPBC428.18 |cdt1||replication licensing factor Cdt1|Schizosaccha... 26 6.1
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 26 6.1
SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.1
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 8.0
SPAC17G8.03c |dpb3||DNA polymerase epsilon subunit Dpb3|Schizosa... 25 8.0
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 8.0
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 34.3 bits (75), Expect = 0.017
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Frame = +3
Query: 234 RQVDDQLQMALQQLKTSREQCQQLLKEREDNEVETLQVIKKNTMLKGQLSQLSIEYNEVL 413
+++++ Q +QLK + + QQL ER + E + + +N L+ +L +L E N+ L
Sbjct: 619 QELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLE-ESNKSL 677
Query: 414 ETNKKLQNVVDGFDQCSGEYVESLQLSAEL----KVKLSQAHDCISNLQLEITNLKAQKT 581
K Q VD ++ E L+ S E K++ + I NL+ + L+AQ+
Sbjct: 678 ---IKKQEDVDSLEKNIQTLKEDLRKSEEALRFSKLEAKNLREVIDNLKGKHETLEAQR- 733
Query: 582 QSLYSELIESEPASGTVITTSE 647
L+S L S+ + I +SE
Sbjct: 734 NDLHSSL--SDAKNTNAILSSE 753
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 32.3 bits (70), Expect = 0.070
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Frame = +3
Query: 186 TINFCNSKMMTRGTKARQVDDQLQMALQQLKTSREQCQQLLKEREDNEVETLQVIKKNTM 365
T+N + +G QV + + A +++S QQL E D E Q+ +
Sbjct: 581 TLNALQKQNKQKGEVLEQVVAESEAAKNMVESSNASIQQLKSEVADKEQTLAQLHLQLDE 640
Query: 366 LKGQLSQLSIEYNEV----LETNKKLQNVVDGFDQCSGEYVE-SLQLSAELKVKLSQAHD 530
+ +L L E V L+ K+ N + EY E S QL AE K +LS+ D
Sbjct: 641 MTQRLVSLDEESKAVSQRKLDLEYKINNSKTQLATATEEYHEHSKQLEAE-KQELSKLED 699
Query: 531 CISNLQL 551
+ ++ L
Sbjct: 700 GLKSVNL 706
>SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 491
Score = 31.9 bits (69), Expect = 0.092
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 336 FRLRC-LLSLLTVVDTVPVMFSVVEEPFEVGHQLDELWYLWSSFWNCRN 193
+ L C L+LL D +P++F E+ + GH + LW+S +N +N
Sbjct: 324 YSLLCNTLTLLLFTDGIPIIFQGQEQMYAGGHDPENRDALWTSNYNQQN 372
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 31.5 bits (68), Expect = 0.12
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 11/146 (7%)
Frame = +3
Query: 204 SKMMTRGTKARQVDDQLQMALQ-QLKTSREQCQQLLKEREDNEVETLQVIKKNTMLKGQL 380
S M+ R +A + + ++Q + Q+ E+ QQL E E E ET + + + Q
Sbjct: 124 SSMVNRKQRAAKEEQKIQEEFERQITDLLEEQQQLKLEIERLEAETERANSETEQYEKQK 183
Query: 381 SQLSIEY----NEVLETNKKLQNVVDGFDQCSGEYVESL-QLSAELKVKLSQAHDCISNL 545
L EY NE L+ + +L + E +L + ++ K+ D + N
Sbjct: 184 EALEEEYEELRNECLKHDPQLDAEIRTLQDTFEEVERTLTKQVSDAKIADKPLKDSMFNS 243
Query: 546 QLEITNL-----KAQKTQSLYSELIE 608
E + KA+K +YSE I+
Sbjct: 244 NSEKEKIMHALEKAEKDADIYSEFIQ 269
>SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large
subunit Rpc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1405
Score = 31.1 bits (67), Expect = 0.16
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Frame = +3
Query: 198 CNSKMMTRGTKARQVDDQLQMALQQLKTSREQCQQL----LKEREDNEVETLQVIKKNTM 365
C+S +++ K + + D + + L+ S + C+++ K R ++ + +Q + K
Sbjct: 109 CSSVLLSDQEKRQFLKDLRRPGIDNLRRS-QICKRINDHCKKMRRCSKCDAMQGVVKKA- 166
Query: 366 LKGQLSQLSIEYNEVLETNKKLQNVVDGFDQCSGEYVESLQLSAELKVKLSQAHDCISNL 545
G L + + V ++ +N FD E+L+ ELK+ LS+AHD ++
Sbjct: 167 --GPLKIIHERFRYVRKSQDDEENFRHSFD-------EALKTIPELKMHLSKAHDDLN-- 215
Query: 546 QLEITNLKAQKTQSLYSELIESEPASG 626
L++ NL Q T + EL+ +P G
Sbjct: 216 PLKVLNLFKQIT-PVDCELLGMDPEHG 241
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 29.9 bits (64), Expect = 0.37
Identities = 22/121 (18%), Positives = 54/121 (44%)
Frame = +3
Query: 201 NSKMMTRGTKARQVDDQLQMALQQLKTSREQCQQLLKEREDNEVETLQVIKKNTMLKGQL 380
N+K + ++D++ + +QL +++ +ERE+ V ++ ++ +
Sbjct: 648 NAKDLDNTNLMEILNDKISVLQRQLTDVKDELDVSEEEREEAIVAGQKLSASFELMSNEK 707
Query: 381 SQLSIEYNEVLETNKKLQNVVDGFDQCSGEYVESLQLSAELKVKLSQAHDCISNLQLEIT 560
L ++Y+ + QN++D ++ E S +L E K++ D N ++ +
Sbjct: 708 QALELKYSSLKNELINAQNLLDRREEELSEL--SKKLFEERKIRSGSNDDIEKNKEINVL 765
Query: 561 N 563
N
Sbjct: 766 N 766
Score = 26.6 bits (56), Expect = 3.5
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 249 QLQMALQQLKTSREQCQQLLKEREDNEVETL--QVIKKNTMLKGQLSQLSIEYNEVLETN 422
QLQ L +L + Q LL E+ED E+ TL Q+ +K ++ + Y + E
Sbjct: 289 QLQNRLDELSEELDVAQDLLTEKED-EIATLKRQIEEKENSSSAFENEENSSYVHLQEDY 347
Query: 423 KKLQNVVDGF 452
LQ D F
Sbjct: 348 AILQAKCDEF 357
>SPCC338.04 |cid2||caffeine induced death protein
Cid2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 167
Score = 29.1 bits (62), Expect = 0.65
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Frame = +3
Query: 228 KARQVDDQLQMALQQLK----------TSREQCQQLLKEREDNEVETLQVIKK-NTMLKG 374
KAR++DD +Q++L K T E+CQ + K+ + + Q +K+ T+++
Sbjct: 21 KARKIDDTIQLSLNSAKWEYPEGKVHETQEERCQNVKKKLFEGWLSRDQFLKECQTIVRS 80
Query: 375 QLSQ 386
QL Q
Sbjct: 81 QLDQ 84
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 29.1 bits (62), Expect = 0.65
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Frame = +3
Query: 204 SKMMTRGTKARQVDDQLQMALQQLKTSREQCQQLLKEREDNEVETLQVI-----KKNTML 368
S + T ++ R ++ +++ + + E C +L+E+E +V+ QV+ K NT
Sbjct: 844 SSLQTELSRLRDEKRNSEVDIERHRQTVESCTNILREKEAKKVQCAQVVADYTAKANTRC 903
Query: 369 KGQLSQLS-IEYNEVLETNKKLQNVVDGFDQCSGEYVESLQLSAELKVKLSQAHDCISNL 545
+ QLS E + +E +LQ + + +G VE +AE + + HD L
Sbjct: 904 ERVPVQLSPAELDNEIE---RLQMQIAEWRNRTGVSVEQ---AAEDYLNAKEKHDQAKVL 957
Query: 546 QLEITNL 566
+T L
Sbjct: 958 VARLTQL 964
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 207 KMMTRGTKARQVDDQLQMALQQLKTSREQCQQLLKEREDNEVETLQVIKKN 359
K+ ++ + V ++L QQL S ++L +E+ D+ V LQV+K+N
Sbjct: 308 KLTSQQSLYNNVTEELNNNKQQLLISENSLREL-QEKYDSVVSELQVVKEN 357
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 28.3 bits (60), Expect = 1.1
Identities = 30/132 (22%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Frame = +3
Query: 225 TKARQVDDQLQMALQQLKTSRE-QCQQLLKEREDNEVETLQVIKKNT-MLKGQLSQLSIE 398
+K+ + D + + +L+T E + ++ K +NE E++ + K+ L +++QLS
Sbjct: 556 SKSSKESDDYEEVVGKLRTEAEREIEKFEKTIRENE-ESISLFKEEVEKLTDEITQLSER 614
Query: 399 YNEVLETNKKLQNVVDGFDQCSGEYVE-SLQLSAELKVKLSQAHDCISNLQLEITNLKAQ 575
YN+ +LQ + ++ + + E S ++ L +L + +L+ E K Q
Sbjct: 615 YNDKCHEFDELQKRLQTLEEENNKAKEDSTSKTSNLLEQLKMTEAEVDSLRKENEENK-Q 673
Query: 576 KTQSLYSELIES 611
SEL++S
Sbjct: 674 VIALKESELVKS 685
Score = 27.5 bits (58), Expect = 2.0
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 14/88 (15%)
Frame = +3
Query: 264 LQQLKTSREQCQQLLKEREDNE----VETLQVIKKN----------TMLKGQLSQLSIEY 401
L+QLK + + L KE E+N+ ++ +++K N L QLSQL E
Sbjct: 651 LEQLKMTEAEVDSLRKENEENKQVIALKESELVKSNDNKLLLNEQIESLNDQLSQLKTEM 710
Query: 402 NEVLETNKKLQNVVDGFDQCSGEYVESL 485
V + + L + + + + ++SL
Sbjct: 711 ESVTTSKESLADYLSNLKERHNDELDSL 738
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/47 (31%), Positives = 32/47 (68%)
Frame = +3
Query: 270 QLKTSREQCQQLLKEREDNEVETLQVIKKNTMLKGQLSQLSIEYNEV 410
+LK++ + +QLL+E+E+ E+E + ++L QLS+L ++ N++
Sbjct: 614 ELKSTENRYRQLLQEKEE-ELEIQKAAVDESLL--QLSKLQLDRNDI 657
>SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Frame = +3
Query: 345 VIKKNTMLKGQLSQLSIEYNEVLETNKKLQNVVDGFDQCSGEYVE-SLQLSAEL--KVKL 515
++KK ++ G +++ + Y+ + Q V+DG C +Y L + +L VK
Sbjct: 123 ILKKAKIIPGSEARVFVGYDSRSTSEILAQAVIDGIVVCKAKYENFGLLTTPQLHYMVKA 182
Query: 516 SQAHDCISNLQLEITNLKAQKTQSLYSELIESEPASGTVI 635
SQ + + +K Y L+ + GTV+
Sbjct: 183 SQTYGTPDAIGEPTERGYFEKLSKAYQSLMTGKKIKGTVL 222
>SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 478
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 318 LSLLTVVDTVPVMFSVVEEPFEVGHQLDELWYLWSSFWNCRN 193
L+ L +D +P+++ E+ F+ G D LW S +N N
Sbjct: 326 LTALIFMDGIPIIYYGQEQMFDGGSDPDNREGLWKSKYNTSN 367
>SPCC1672.02c |sap1||switch-activating protein
Sap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 254
Score = 27.1 bits (57), Expect = 2.6
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Frame = +3
Query: 219 RGTKARQVDDQLQMALQQLKTSREQCQQLLKEREDNEVETLQVIKKNTMLKG------QL 380
R ++ +Q ++ + ++ + E ++L K E+ + + V K N + K +L
Sbjct: 122 RLSELQQYREKFLVGKRKCDCNDEINERLKKLTEEQQNVDMLVAKVNFLSKHLHDNEEKL 181
Query: 381 SQLSIEYNEVLETNKKLQNVVDGFDQCS 464
Q++ + +EVL NK+LQ ++D D S
Sbjct: 182 MQVNAKMDEVLAENKRLQQLLDHNDLLS 209
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 543 LQLEITNLKAQKTQSLYSELIESEPASGTVITTSECD 653
L+ E+ NL+ K Y +L+E+E IT EC+
Sbjct: 143 LEREVENLR--KELDKYKDLVETEAEKRAAITKEECE 177
>SPBC405.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 143
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/74 (25%), Positives = 40/74 (54%)
Frame = +3
Query: 225 TKARQVDDQLQMALQQLKTSREQCQQLLKEREDNEVETLQVIKKNTMLKGQLSQLSIEYN 404
T A + +D+ + L++ + + C + + ++ Q +KNT+L+ QLS L E N
Sbjct: 54 TIASENNDENVINLEEFRQLKRNCDLYQRNLQKLQLLFKQQSQKNTLLEKQLS-LQTELN 112
Query: 405 EVLETNKKLQNVVD 446
+ E +K+++ + D
Sbjct: 113 Q--EKDKRVKILQD 124
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/94 (20%), Positives = 48/94 (51%)
Frame = +3
Query: 225 TKARQVDDQLQMALQQLKTSREQCQQLLKEREDNEVETLQVIKKNTMLKGQLSQLSIEYN 404
+K ++ DD+L+ QL+ + ++ E+ V + K+NT Q+ + + N
Sbjct: 420 SKLKKRDDKLKRVSSQLEHLKHNYEEEKSMNENLLVRIQTLEKQNTTKSDQIVSMQFQIN 479
Query: 405 EVLETNKKLQNVVDGFDQCSGEYVESLQLSAELK 506
++ N++L++++ F + + ++ + S EL+
Sbjct: 480 DL---NEQLRDLM--FTISASQEIQKMGQSEELQ 508
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2685
Score = 26.6 bits (56), Expect = 3.5
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Frame = +3
Query: 3 LLVNIIVLSQLLFK----LNSYKFFIV--LIIV*NIYLSDN--ISLLLRKI-FN*CI--L 149
L + ++++ ++FK LNS+ F + + + + L DN IS +I F C L
Sbjct: 667 LNLELLMIKSIIFKNGKSLNSHLFLQIPNINFIVSTILRDNTAISRFTTEINFLRCFASL 726
Query: 150 LHNCKIFYFY 179
LHNC IFY Y
Sbjct: 727 LHNCCIFYAY 736
>SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 381
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 222 GTKARQ-VDDQLQMALQQLKTSREQCQQLLKERED 323
G++ RQ V+D L+ LQ+L E+C++ +K D
Sbjct: 319 GSRDRQDVEDYLKKVLQELLCEAEECKEKVKGISD 353
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 26.6 bits (56), Expect = 3.5
Identities = 25/113 (22%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = +3
Query: 255 QMALQQLKTSREQCQQLLKEREDNEVETLQVIKKNTMLKGQLSQLSIEYNEVLETNKKLQ 434
+++ ++L S + LKE + K++ ++ +S+ +E ++L K ++
Sbjct: 647 RLSTKKLPGSTMKAASALKEYPQQQSMKSGGEKQDNLVTITMSE-KVEL-DLLREEKAIR 704
Query: 435 NVVDGFDQCSGEY----VESLQL-SAELKVKLSQAHDCISNLQLEITNLKAQK 578
V + D E + LQ+ +AE+K ++ + IS ++EIT+L+ +K
Sbjct: 705 QVQEAEDALERERLFREINDLQIQNAEMKEQVYEKESTISQKEVEITSLRNEK 757
>SPAC110.02 |pds5||cohesin-associated protein
Pds5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1205
Score = 26.2 bits (55), Expect = 4.6
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Frame = +3
Query: 291 QCQQLLKEREDNEVETLQVIKKNTMLKGQLSQLS---IEYNEVLETNKKL--QNVVDGFD 455
Q Q+ + DN + T +++K+ L G+L+ LS I+ + VL + L N++ D
Sbjct: 5 QFQRNIVPTHDNPLTTSEILKRLRDLLGELTSLSQDTIDRDSVLPVARSLVNNNLLHHKD 64
Query: 456 QCSGEY-----VESLQLSA-ELKVKLSQAHDCISNLQLEITNLKAQKTQSLYSELIE 608
+ Y VE L+L A + LSQ D I + L+I + + + Y ++ E
Sbjct: 65 KGIRSYTLCCIVELLRLCAPDAPFTLSQLED-IFQVILKILSGLMNQESTYYPQIYE 120
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.2 bits (55), Expect = 4.6
Identities = 13/59 (22%), Positives = 31/59 (52%)
Frame = +3
Query: 267 QQLKTSREQCQQLLKEREDNEVETLQVIKKNTMLKGQLSQLSIEYNEVLETNKKLQNVV 443
+Q+++ +EQ + L +N V T +++ LK + + + Y+E N+K+ ++
Sbjct: 3654 RQIRSLQEQLLKTLCSSNENIVGTDEIVVLLKNLKEKHETIRLAYSESQSINRKVDELI 3712
>SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 862
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 430 YKML*TASISAAVSMLSRSNSQLN*KSNFLRHMIVSLIY 546
Y + S+SA S L R+N S F H V+L+Y
Sbjct: 200 YSLYAQMSVSACSSQLERANILTTCLSYFTEHKSVNLLY 238
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 375 QLSQLSIEYNEVLETNKKLQNVVDGFDQCSGEY 473
+L LS++ +E+L+TN L N D D + E+
Sbjct: 35 ELGALSLKVDEILKTNYNLINPEDVTDSDNNEF 67
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 25.8 bits (54), Expect = 6.1
Identities = 30/139 (21%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Frame = +3
Query: 249 QLQMALQQLKTSREQCQQLLKEREDNEVETLQVIKKNTMLKGQLSQLSIEYN-EVLETNK 425
QL+ +++ ++E +KER E + + +K + + +QL+ +Y+ E+L+ +
Sbjct: 607 QLKSLREEIDNTKEALDLSVKERSIQEEKLNESLKTSKTNLEEQTQLAEKYHEELLDNQQ 666
Query: 426 KLQNVVDGFD----QCS--GEYVESLQLSAELKVK-LSQAHDCISNLQLEITN---LKAQ 575
KL ++ D C E ++ L+ E ++K + H ++ +I N + +
Sbjct: 667 KLYDLRIELDYTKSNCKQMEEEMQVLREGHESEIKDFIEEHSKLTKQLDDIKNQFGIISS 726
Query: 576 KTQSLYSELIESEPASGTV 632
K + L SEL +S+ + ++
Sbjct: 727 KNRDLLSELEKSKSLNNSL 745
>SPBC428.18 |cdt1||replication licensing factor
Cdt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 444
Score = 25.8 bits (54), Expect = 6.1
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 8/109 (7%)
Frame = +3
Query: 159 CKIFYFYVGTI---NFCNSKMMTRGTKARQVDDQLQMALQQLKTSREQCQQLLKEREDNE 329
C+ Y + I FC ++M+ G++ + L ++++ ++S ++ + E N
Sbjct: 3 CRALYSHDNNILIFGFC-VQIMSAGSQTK-----LNFSVRKTRSSSKRSNAAIIEPPKNP 56
Query: 330 VETLQVIKKNTMLKGQLSQLSIEYNEVLETNKK-----LQNVVDGFDQC 461
E Q+I LK L S+E NEVL K L+ V + D C
Sbjct: 57 -EDSQIIPAVKRLKENLDTESLEQNEVLPPVKNESVLFLEKVFNAVDIC 104
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 249 QLQMALQQLKTSREQCQQLLKERED 323
QLQ ++L+ RE+ QQL++ ED
Sbjct: 436 QLQALQEELRVEREERQQLIQMSED 460
>SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 261
Score = 25.8 bits (54), Expect = 6.1
Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Frame = +3
Query: 240 VDDQLQMALQQLKTSREQCQQLLKEREDNEVETLQVIKKNTMLKGQLSQLSIEYNEVLET 419
++ Q + LQ LK E+ + LKE E + + + N L ++ L + E+
Sbjct: 14 MNKQTSLVLQNLK---EETENQLKELEKKRSQLHKEEQINLQLVYAINDLRSKTKELKAE 70
Query: 420 NKKLQNVVDGF----DQCSGEYVESLQLSAELKVKLSQAHDCISNLQ---------LEIT 560
N+K ++ F D + + ++ + S +L+ L H + ++ LE+
Sbjct: 71 NEKEDTFLNSFNASGDLTANKKIQLREQSRKLEESLLSYHKKVKEMEKQHRSASSKLELA 130
Query: 561 NLKAQKTQS 587
L AQ+ Q+
Sbjct: 131 KLSAQQLQT 139
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.4 bits (53), Expect = 8.0
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Frame = +3
Query: 333 ETLQVIKKNTMLKGQLS-QLSIE--YNEVLETNKKL---QNVVDGFDQCSGEYVESLQLS 494
+T I K + L QL +LS+E Y + +E KL ++ + +YVES Q
Sbjct: 113 DTPLTISKISFLLQQLEFKLSVEEQYRKGIEKMAKLYEREHDRRSIAEAEKKYVESAQKI 172
Query: 495 AELKVKLSQAHDCISNLQLEITNLKAQKTQSLYSELIESEPASGTVITT 641
LK L + HD L +EI T+S L P SG + T
Sbjct: 173 TLLKQALKRYHD----LHIEIDEEDVPSTES-RGNLNARRPQSGLLKIT 216
>SPAC17G8.03c |dpb3||DNA polymerase epsilon subunit
Dpb3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 199
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 276 KTSREQCQQLLKEREDNEVETLQVIKKNTMLKGQLSQ 386
KT R + ++ E E NE + +KKNT+ + ++ +
Sbjct: 113 KTKRPRARRAANEGEHNESVPAKKVKKNTVKEEEIEK 149
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 570 AQKTQSLYSELIESEPASGTVITTSE-CDIPTIDLTGGDSDSTHS 701
A + YS+ + S ASGT +TSE P + G + T S
Sbjct: 591 ASNSSDYYSQTVSSITASGTTSSTSEIVSTPASNSNTGSLNGTSS 635
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,702,708
Number of Sequences: 5004
Number of extensions: 52376
Number of successful extensions: 179
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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