Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4a13
         (539 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q554P1 Cluster: Putative uncharacterized protein; n=1; ...    37   0.34 
UniRef50_A4BX35 Cluster: Putative uncharacterized protein; n=1; ...    35   1.4  
UniRef50_A7GGR6 Cluster: Polysaccharide biosynthesis protein; n=...    33   4.2  
UniRef50_Q8IEB9 Cluster: Putative uncharacterized protein MAL13P...    33   5.6  

>UniRef50_Q554P1 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 101

 Score = 36.7 bits (81), Expect = 0.34
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
 Frame = -2

Query: 490 QNLLKKTCKVAIYF-HLCNFIFIVFRLEI----MLGKKLLFIF*SLTYYMFYLHFIYYLK 326
           +N+ +K C+V  Y  ++C  I  +F L         K L+FIF  + ++ FY +F ++  
Sbjct: 18  KNVTRKECEVIFYISNICIVILKIFTLRFGGSNNQKKYLIFIFIFIFFFFFYFYFFFFFN 77

Query: 325 SPLCKPNVYSFPKE--TTNY 272
               K   + F  +  TTN+
Sbjct: 78  PTFAKKFYFYFHSKQFTTNH 97


>UniRef50_A4BX35 Cluster: Putative uncharacterized protein; n=1;
           Polaribacter irgensii 23-P|Rep: Putative uncharacterized
           protein - Polaribacter irgensii 23-P
          Length = 213

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = -1

Query: 401 GQETSFYILVFNVLYVLSTLYLLFEVAFMQAQ 306
           G++TSF+ L  NVL+V S+L L F ++ + AQ
Sbjct: 54  GRDTSFFSLFHNVLFVFSSLVLAFVISLITAQ 85


>UniRef50_A7GGR6 Cluster: Polysaccharide biosynthesis protein; n=4;
           Clostridium botulinum|Rep: Polysaccharide biosynthesis
           protein - Clostridium botulinum (strain Langeland / NCTC
           10281 / Type F)
          Length = 476

 Score = 33.1 bits (72), Expect = 4.2
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = -2

Query: 463 VAIYFHLCNFIFIVFRLEIMLGKKLLFIF*SLTYYMFYLHFIYYLK 326
           ++I+F LC F+  +F  + + G+ L++IF    +  F L FI Y +
Sbjct: 100 LSIFFILCGFLSKLFIFKDVTGEYLIYIFLIAIFQQFKLFFINYFR 145


>UniRef50_Q8IEB9 Cluster: Putative uncharacterized protein
           MAL13P1.105; n=2; Plasmodium|Rep: Putative
           uncharacterized protein MAL13P1.105 - Plasmodium
           falciparum (isolate 3D7)
          Length = 858

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 20/85 (23%), Positives = 43/85 (50%)
 Frame = -1

Query: 398 QETSFYILVFNVLYVLSTLYLLFEVAFMQAQCIFVSERNNQLST*KSKFVNFNSHKTINF 219
           ++++ YI     L  +S L + F + ++Q   +++ +    L   K   + FN  KTI +
Sbjct: 618 KQSNNYIFRITCLQYISKLIIYFPLEYIQHNILYILD---DLCKDKISNIRFNIIKTIYY 674

Query: 218 TKTHLYD*CVVIVNNT*SDNTIRKL 144
            +T++    ++++NN   D  I K+
Sbjct: 675 IQTYVQH-VLLVINNNSYDEIINKI 698


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,195,437
Number of Sequences: 1657284
Number of extensions: 8323024
Number of successful extensions: 17967
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17936
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)