Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4a07
(682 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 27 0.14
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 27 0.14
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 24 1.3
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 24 1.3
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 24 1.3
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 23 3.1
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 5.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.1
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 9.3
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 27.1 bits (57), Expect = 0.14
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 359 HDISDSLRNQGHGRHHDILPGEVSFELPPEDTTQHGQIHCGLGGRG 496
H IS + H HHD+LP + + P T CG G G
Sbjct: 354 HQISSMGHSHAHPMHHDMLPETMHMGMGP-SLTPLASPGCGPGQGG 398
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 27.1 bits (57), Expect = 0.14
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 359 HDISDSLRNQGHGRHHDILPGEVSFELPPEDTTQHGQIHCGLGGRG 496
H IS + H HHD+LP + + P T CG G G
Sbjct: 354 HQISSMGHSHAHPMHHDMLPETMHMGMGP-SLTPLASPGCGPGQGG 398
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +2
Query: 290 VQEERHLDRKRKLRHQLQHVCSWHDISDSLRNQGHGRHHD 409
+ E+ +R+ + RH+ Q I + H HHD
Sbjct: 71 INEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQHHHD 110
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +2
Query: 290 VQEERHLDRKRKLRHQLQHVCSWHDISDSLRNQGHGRHHD 409
+ E+ +R+ + RH+ Q I + H HHD
Sbjct: 222 INEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQHHHD 261
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +2
Query: 290 VQEERHLDRKRKLRHQLQHVCSWHDISDSLRNQGHGRHHD 409
+ E+ +R+ + RH+ Q I + H HHD
Sbjct: 281 INEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQHHHD 320
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2
Query: 146 WRQNRDRWQN 175
+RQN+ RWQN
Sbjct: 177 YRQNQQRWQN 186
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.8 bits (44), Expect = 5.3
Identities = 13/57 (22%), Positives = 22/57 (38%)
Frame = +3
Query: 117 TANIPGLLKVGDKIEIGGKIKENARKMSVNLCAQEGEEPRDVVLHFDVRFHRDNIIS 287
T +P L G + +G ++ + + C Q ++ H H NIIS
Sbjct: 453 TMPLPRKLVRGQDVWLGKGAEQTRQILKCMWCGQSFRSLAEMTSHMQQTQHYTNIIS 509
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 377 LRNQGHGRHHDILPGEVSFELPP 445
LRN HD +P + FE PP
Sbjct: 429 LRNGDPCFFHDTIPPYLFFESPP 451
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 377 LRNQGHGRHHDILPGEVSFELPP 445
LRN HD +P + FE PP
Sbjct: 429 LRNGDPCFFHDTIPPYLFFESPP 451
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 377 LRNQGHGRHHDILPGEVSFELPP 445
LRN HD +P + FE PP
Sbjct: 429 LRNGDPCFFHDTIPPYLFFESPP 451
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 377 LRNQGHGRHHDILPGEVSFELPP 445
LRN HD +P + FE PP
Sbjct: 429 LRNGDPCFFHDTIPPYLFFESPP 451
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 446 EDTTQHGQIHCGLGGRGED 502
+D T H HC G G+D
Sbjct: 77 QDHTTHYTCHCPYGYTGKD 95
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,080
Number of Sequences: 336
Number of extensions: 4334
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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