Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4a07
(682 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0352 + 20533846-20534038,20534117-20534391,20535134-20535634 33 0.21
03_05_0382 + 23649597-23649645,23649675-23649735,23650784-236509... 33 0.21
08_02_0307 - 15612761-15612856,15613879-15613950,15614325-15615290 32 0.37
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 31 0.64
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 31 1.1
02_04_0347 + 22193708-22193720,22194317-22194390,22195388-221961... 31 1.1
11_01_0658 + 5342508-5343602,5343697-5343764,5343994-5344042,534... 30 2.0
09_04_0549 + 18478475-18478664,18479381-18480648 29 2.6
09_04_0547 + 18467016-18467205,18467922-18469189 29 2.6
11_01_0260 - 1985258-1985794,1986874-1986990 29 3.4
08_01_0399 + 3524723-3525272,3525468-3525544,3526816-3526861,352... 29 3.4
11_04_0332 + 16465360-16465769,16465873-16466272,16466379-164664... 29 4.5
07_01_0084 + 657846-658538,660652-661920 29 4.5
09_06_0019 + 20258844-20258988,20259870-20259974,20261027-202610... 28 6.0
07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291... 28 6.0
05_03_0354 - 12871313-12871429,12872829-12873143 28 6.0
03_03_0020 + 13803567-13804610 28 6.0
01_07_0037 + 40657449-40658010,40658567-40658901 28 6.0
08_01_0874 + 8575718-8576422,8576603-8576662,8576799-8576945,857... 28 7.9
02_04_0521 - 23631951-23633810 28 7.9
>05_04_0352 + 20533846-20534038,20534117-20534391,20535134-20535634
Length = 322
Score = 33.1 bits (72), Expect = 0.21
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = -3
Query: 635 LGPWTSFHVTDHQWRSRGLGGEGARCSGLITAHRFVREIKITMRDPLHVRPGHNVFGHVE 456
L P FH TD + L RC+GL A + E+ + DP H+ P ++G E
Sbjct: 18 LPPGFRFHPTDEELVMHYLC---RRCAGLPIAVPIIAEVDLYKFDPWHL-PRMALYGEKE 73
Query: 455 WYLREEVRMKLP 420
WY K P
Sbjct: 74 WYFFSPRDRKYP 85
>03_05_0382 +
23649597-23649645,23649675-23649735,23650784-23650937,
23651019-23651149,23651239-23651315,23651439-23651477,
23651976-23652067,23652140-23652277,23652385-23652549
Length = 301
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 312 IGSGNYDTNYNMFVPGTIFRIVFEIKDT 395
IGS NYDT+Y + VP RI+F++ T
Sbjct: 237 IGSSNYDTSYKIRVPSWTDRILFKVDHT 264
>08_02_0307 - 15612761-15612856,15613879-15613950,15614325-15615290
Length = 377
Score = 32.3 bits (70), Expect = 0.37
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 4/111 (3%)
Frame = -3
Query: 656 WRTCRSLLGPWTSFHVTDHQWRSRGLGGEGARCSGLITAHRFVREIKITMRDPLHVRPGH 477
WR + + F H WRS + C + RF + + + + PGH
Sbjct: 37 WRVLAGDVRDYICFRAACHHWRSC----TASPCGRGVVVPRFHPRRWMMLPEGNGLYPGH 92
Query: 476 NVF-GHVEWYLREE---VRMKLPLAVYRDDVRVLDFEDYPKYRARNKHVVV 336
G V ++ VR++LP+A RDD R+LD D RN+ V
Sbjct: 93 GKLRGFVRFFNLSTGAFVRLRLPIA--RDDHRILDSVDGILLLQRNRDTAV 141
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 31.5 bits (68), Expect = 0.64
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 537 VSGDEAGAPG--AFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCS 668
VSG APG A AP+ PP V+ PRA TA P+ S
Sbjct: 79 VSGGGGSAPGGAATAPRQGAPPAAATSVQGAPRAPATAATVPQGGS 124
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +2
Query: 77 GRLRGY*--T*NAGFHRQHTGITKSWRQNRDRWQNQGECKKDVREPLRSRRRGAEGCGSP 250
GR RGY + + + ++SW ++R R ++ + R P RSR R + P
Sbjct: 1223 GRSRGYDRRSGSRSLSSRSRSRSRSWSRSRSRSRSWSRSRSRSRSPSRSRSRSYDQGAGP 1282
Query: 251 LRREVP 268
RR P
Sbjct: 1283 ARRPRP 1288
>02_04_0347 +
22193708-22193720,22194317-22194390,22195388-22196132,
22196203-22196417,22196505-22196786,22196870-22196998,
22197088-22197267,22197538-22197645,22197888-22198094
Length = 650
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 114 FTANIPGLLKVGDKIEIGGKIKENARKMSVNLCAQE--GEEPRDVVLHFDVRFHRDNI 281
FT +IP L VG + I G + ++L E G + +VLH+DVR D +
Sbjct: 187 FTIDIPCGLIVGSSVTIIGTPGSLSGNFRIDLVGTELPGGSGKPIVLHYDVRLTSDEL 244
>11_01_0658 +
5342508-5343602,5343697-5343764,5343994-5344042,
5344217-5344333,5344438-5344506,5344631-5344725,
5345580-5345658,5346499-5346563,5347368-5347461,
5347675-5347744,5348363-5349357
Length = 931
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 266 PPGQHHIAVQEERHLDRKRKLRHQLQH 346
PP QH Q+++HLD + L+HQ QH
Sbjct: 145 PPPQHQ---QQQQHLDAMQDLQHQHQH 168
>09_04_0549 + 18478475-18478664,18479381-18480648
Length = 485
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +3
Query: 282 ISLSRKNGIWIGSGNYDTNYNMFVPGTIFRIVFEIKDTDVITIYCQ 419
+SL + GI +G+GNY + + P + ++F+ +D+ + C+
Sbjct: 134 VSLPAQRGISLGTGNYVVSVGLGTPAKQYAVIFD-TGSDLSWVQCK 178
>09_04_0547 + 18467016-18467205,18467922-18469189
Length = 485
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +3
Query: 282 ISLSRKNGIWIGSGNYDTNYNMFVPGTIFRIVFEIKDTDVITIYCQ 419
+SL + GI +G+GNY + + P + ++F+ +D+ + C+
Sbjct: 134 VSLPAQRGISLGTGNYVVSVGLGTPAKQYAVIFD-TGSDLSWVQCK 178
>11_01_0260 - 1985258-1985794,1986874-1986990
Length = 217
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 131 GITKSWRQNRDRWQNQGECKKDVREPLRSRRRGAEGCG 244
G+ K RQN++R + +G C+ ++ P+ + CG
Sbjct: 153 GLWKVGRQNKERGRGRGRCRGSLQPPVHVVGQQQSSCG 190
>08_01_0399 +
3524723-3525272,3525468-3525544,3526816-3526861,
3527121-3527235,3528252-3528306,3528432-3528557
Length = 322
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -3
Query: 596 WRSRGLGGEGARCSGLITAHRFVREIKITMRDPLHVRPGHNV 471
WR G GG GAR G++ A R R ++ LH R H V
Sbjct: 137 WRRGGCGGGGAR--GVLPAKRAPRAPRMRWTSTLHARFVHAV 176
>11_04_0332 +
16465360-16465769,16465873-16466272,16466379-16466423,
16467113-16467139,16467201-16467266,16467889-16467950,
16468049-16468123,16468218-16468383,16468611-16468734,
16469737-16469843,16469992-16470102
Length = 530
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -3
Query: 632 GPWTSFHVTDHQWRSRGLGGEGARCSGLITAHRFVREIKITMRDPLHVRPGHNVFGHVEW 453
GP ++ V R G+G +G L+ +F +E+ +T DP V+ + G W
Sbjct: 13 GPQRNYQVVVAATRDMGIGKDGVLPWKLLGDLKFFKELTVTTADP--VKKNAVIMGRKTW 70
>07_01_0084 + 657846-658538,660652-661920
Length = 653
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 353 SWHDISDSLRNQGHGRHHDILPGEVSFELPPEDTTQHGQIHCGLGGRGEDLALLF 517
S+H I HGRH GEV+F+ P ++ Q+H +++ ++F
Sbjct: 110 SYHHIDHDGNPLPHGRHRVAASGEVAFDSP----SRPDQVHLSFADGVDEMRVMF 160
>09_06_0019 +
20258844-20258988,20259870-20259974,20261027-20261097,
20261658-20261714,20262661-20262849,20263096-20263119
Length = 196
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 128 TGITKSWRQNRDRWQNQGECKKDVREPLRSRRRGA--EGCGSPLRREVPPGQHHIAVQEE 301
TG++K+ QN+ W+ + +K V L + G + G P RR PG A ++
Sbjct: 100 TGLSKALYQNKTVWKAI-DYEKLVNSWLYNELPGCTDDVAGRPSRRFRCPGDFAFATDQK 158
Query: 302 RHLDRK 319
+HL R+
Sbjct: 159 QHLPRE 164
>07_01_0389 -
2915191-2915604,2915696-2915752,2915867-2915922,
2916053-2916113,2916243-2916365,2916505-2916537,
2916617-2916709,2916839-2916934,2917025-2917203,
2917344-2917530,2918051-2918184,2918311-2918518,
2918598-2918633,2918785-2919241,2919633-2919736,
2920489-2920569,2920646-2920697,2920837-2920876,
2920991-2921085,2921241-2921383,2921899-2922006,
2922120-2922221,2922302-2922348,2922425-2922554,
2923173-2923304,2923404-2923616,2923709-2923963,
2924053-2924799
Length = 1460
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 576 PQSPRPPLVVGDVKRCPRAKKTATGSPKNCSS 671
PQ P PP R PRA +TAT + SS
Sbjct: 10 PQPPPPPSPPNPPPRAPRATRTATPDDASSSS 41
>05_03_0354 - 12871313-12871429,12872829-12873143
Length = 143
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 647 CRSLLGPWTSFHVTDHQWRSRGLGGEGARCSGLIT 543
CR G + DH+WR G GEG GL T
Sbjct: 3 CRESTGAFEGEKGGDHRWRGPG-DGEGEHAGGLTT 36
>03_03_0020 + 13803567-13804610
Length = 347
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = -3
Query: 605 DHQWRSRGLGGEG--ARCSGL 549
DH+W GLGG+ RC GL
Sbjct: 280 DHRWNQHGLGGDNVKGRCRGL 300
>01_07_0037 + 40657449-40658010,40658567-40658901
Length = 298
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 546 DEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSS 671
D A G A + P PPL+V + AK+ S KN +S
Sbjct: 164 DLADGDGVDADELPPPPLMVMPISATVSAKRGGAASDKNSTS 205
>08_01_0874 +
8575718-8576422,8576603-8576662,8576799-8576945,
8577390-8577527
Length = 349
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +3
Query: 168 GKIKENARKMSVNLCAQEGEEPRDVVLHFDVRFHRDNIISLSRKNGIWIGSGNYDTN 338
G++ +R+ + C++ G PR D+ H ++ SRK + GS +N
Sbjct: 76 GRMAYGSRRNAAGTCSETGNRPRRETAGQDLLDHLKERVNSSRKRSLSGGSSPSSSN 132
>02_04_0521 - 23631951-23633810
Length = 619
Score = 27.9 bits (59), Expect = 7.9
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = +2
Query: 227 GAEGCGSPLRREVPPGQHHIAVQEERHLDRKRKLRHQLQHVCSWHDISDSLRNQGHGRHH 406
G G GSP +PP Q ++V + R+ +L + LQ + D+S RN+ G
Sbjct: 402 GGSGQGSPSEAVLPP-QLFVSVSTDM-AGRQLELGYDLQ-AATGIDLS---RNELRGEIP 455
Query: 407 DILPGEVSFE-LPPEDTTQHGQIHCGLGGRGEDLALLF*FREQNG 538
D L E L GQI G+GG G+ L F E +G
Sbjct: 456 DGLVAMKGLEYLNLSCNYLDGQIPSGIGGMGKLRTLDFSHNELSG 500
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,883,007
Number of Sequences: 37544
Number of extensions: 528633
Number of successful extensions: 1874
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1871
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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