Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4a04
         (286 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1480 - 37660591-37660720,37660899-37660930,37661061-376611...    29   0.58 
08_02_0894 + 22346027-22347925                                         28   1.0  
08_02_0731 - 20483518-20484154,20484182-20484375,20484541-204846...    27   1.8  
07_03_1387 + 26202975-26203274,26203363-26203449,26203541-262036...    26   4.1  
09_02_0140 + 4879319-4879968,4881443-4881942,4884230-4884368,488...    25   9.4  
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11...    25   9.4  

>01_06_1480 -
           37660591-37660720,37660899-37660930,37661061-37661155,
           37661460-37661527,37661608-37661694,37662884-37662912,
           37663019-37663138,37663854-37663905,37663986-37664050,
           37664174-37664536,37664637-37664711,37664803-37664940,
           37665025-37665181,37665471-37665478,37665576-37665710,
           37665965-37666082,37666791-37666915,37667571-37667717,
           37668297-37668380,37668671-37668800,37669196-37669347,
           37669678-37669857,37670660-37670731,37671104-37671295,
           37671366-37671411,37671498-37671647,37671725-37671882,
           37671995-37672101,37672191-37672407,37672484-37672696,
           37672852-37672972,37673072-37673253,37673475-37673672,
           37674770-37674967
          Length = 1447

 Score = 29.1 bits (62), Expect = 0.58
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 269 IFLFNISSKYPLYNSFCPTIDTMCS 195
           +FL  I +K+PLYN FC  +   CS
Sbjct: 620 LFLKRIGNKHPLYN-FCKVLSVKCS 643


>08_02_0894 + 22346027-22347925
          Length = 632

 Score = 28.3 bits (60), Expect = 1.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 149 AKFYQKSALLLHYILMNTLYLSLDKMNCKVDIWN 250
           A  Y+ +AL  H  LMN +Y  + K+    D+WN
Sbjct: 452 ASLYRDTALS-HLFLMNNVYYIVHKVKDSPDLWN 484


>08_02_0731 -
           20483518-20484154,20484182-20484375,20484541-20484640,
           20485282-20485622
          Length = 423

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 108 APPSIAHKLVTEWWPSSTR 164
           APP+ A  ++  WWPS +R
Sbjct: 364 APPTSASSMLLPWWPSFSR 382


>07_03_1387 +
           26202975-26203274,26203363-26203449,26203541-26203648,
           26203708-26203980,26205242-26205355,26205900-26206268
          Length = 416

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 105 IAPPSIAHKLVTEWWPSSTR 164
           +AP  +  +  TEWWP++ R
Sbjct: 36  VAPAQVRARGPTEWWPAAAR 55


>09_02_0140 +
           4879319-4879968,4881443-4881942,4884230-4884368,
           4886005-4886156,4886267-4886532,4886902-4887028,
           4887111-4887179,4887270-4887518,4887636-4888012
          Length = 842

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 215 TIDTMCSSKYNATTRRTSGRTWPP 144
           T+    SS+YN T R T+  T PP
Sbjct: 338 TVPFRGSSRYNLTFRATANSTLPP 361


>03_01_0014 +
           113638-113754,113836-113950,114570-114835,115365-115575,
           115915-115979,118723-118930,119457-119566,119663-119913,
           120250-120356,120442-120509,120624-120701,121070-121198,
           121341-121481,122297-122344,122648-122743,124071-124183,
           124441-124591,124745-124818,124913-125072,125356-125454,
           125532-125618,125761-125907
          Length = 946

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 95  VEINCASFNRS*ISNGMVAKFYQKSALLLHYI 190
           V+INC   N   + +  V +F ++  +  HY+
Sbjct: 776 VDINCVISNHDRLKDNHVRRFLERHGIPYHYL 807


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,406,041
Number of Sequences: 37544
Number of extensions: 100363
Number of successful extensions: 240
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 291966432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)