Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4a04
         (286 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT009983-1|AAQ22452.1|  622|Drosophila melanogaster RE53941p pro...    27   4.9  
AF006601-1|AAB62567.1|  882|Drosophila melanogaster Knockout pro...    27   4.9  
AE014134-2686|AAF53511.1|  622|Drosophila melanogaster CG4132-PA...    27   4.9  

>BT009983-1|AAQ22452.1|  622|Drosophila melanogaster RE53941p
           protein.
          Length = 622

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = -1

Query: 160 VELGHHSVTNL*AIEGGAINFYERVRNNWIVITQFNQF 47
           ++ G++S   L  IEGG++N Y+ V N+ + +  F ++
Sbjct: 301 LQSGYYSTYCLELIEGGSVNIYD-VLNSELALFYFTEY 337


>AF006601-1|AAB62567.1|  882|Drosophila melanogaster Knockout
           protein.
          Length = 882

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 112 GAINFYERVRNNWI 71
           G +NFYERVR  W+
Sbjct: 863 GNLNFYERVRRMWV 876


>AE014134-2686|AAF53511.1|  622|Drosophila melanogaster CG4132-PA
           protein.
          Length = 622

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = -1

Query: 160 VELGHHSVTNL*AIEGGAINFYERVRNNWIVITQFNQF 47
           ++ G++S   L  IEGG++N Y+ V N+ + +  F ++
Sbjct: 301 LQSGYYSTYCLELIEGGSVNIYD-VLNSELALFYFTEY 337


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,947,901
Number of Sequences: 53049
Number of extensions: 180456
Number of successful extensions: 335
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 465714480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)