Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4a04
(286 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical p... 29 0.54
Z81489-4|CAB04010.1| 361|Caenorhabditis elegans Hypothetical pr... 27 2.9
AL023834-1|CAA19481.1| 177|Caenorhabditis elegans Hypothetical ... 26 3.8
AF003389-9|AAC71134.1| 282|Caenorhabditis elegans Hypothetical ... 26 3.8
Z81115-4|CAB03294.2| 651|Caenorhabditis elegans Hypothetical pr... 25 6.6
U64858-6|AAB18283.2| 392|Caenorhabditis elegans Hypothetical pr... 25 6.6
U29154-3|AAA68419.2| 283|Caenorhabditis elegans Hypothetical pr... 25 6.6
AF016685-8|AAG24150.1| 340|Caenorhabditis elegans Seven tm rece... 25 6.6
U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical pr... 25 8.7
AF016687-4|AAC48097.1| 183|Caenorhabditis elegans Hypothetical ... 25 8.7
>U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical
protein ZK1127.4 protein.
Length = 349
Score = 29.1 bits (62), Expect = 0.54
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = -3
Query: 263 LFNISSKYPLYNSFCPTIDTMCSSKYNATTRRTSGRTWPPFRY*FMSD*RRRN*FLRESS 84
LF I ++ + +D SK+++T + G+ W PFR + D +R + FL++ S
Sbjct: 287 LFEIKEGKEIHFDYPVHMDVEPGSKFHSTEK--DGKKWNPFRRLVIMDDKRFDAFLKKGS 344
>Z81489-4|CAB04010.1| 361|Caenorhabditis elegans Hypothetical
protein C55A1.5 protein.
Length = 361
Score = 26.6 bits (56), Expect = 2.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 146 VAKFYQKSALLLHYILMNTLYLSLDKMNCKVD 241
+ K Y+KSA + I+M+++Y SLD +V+
Sbjct: 314 IVKDYRKSAKRILKIMMDSIYKSLDLQPTRVE 345
>AL023834-1|CAA19481.1| 177|Caenorhabditis elegans Hypothetical
protein Y32B12A.1 protein.
Length = 177
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 142 NGGQVLPEVRLVVALYFDEHIVSIVGQNEL*SGY 243
+G + E++ V A Y D + S + Q+E+ SGY
Sbjct: 4 HGPHSVEELKYVPAEYHDHVVTSTIHQSEMHSGY 37
>AF003389-9|AAC71134.1| 282|Caenorhabditis elegans Hypothetical
protein F23H11.6 protein.
Length = 282
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 165 FW*NLATIPLLIYERLKEAQLISTREFETIGLL*HNL 55
FW NL TIP ++ + S ++F+T+ + +NL
Sbjct: 56 FWNNLPTIPPIVLPTINPDFWASLKKFDTLFHIFYNL 92
>Z81115-4|CAB03294.2| 651|Caenorhabditis elegans Hypothetical
protein T05D4.4 protein.
Length = 651
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 224 FCPTIDTMCSSKYNATTRRTSGRTWP 147
FCP+ T C K+ A T S +WP
Sbjct: 129 FCPSYKTAC--KHKAVTTSVSLTSWP 152
>U64858-6|AAB18283.2| 392|Caenorhabditis elegans Hypothetical
protein C16D9.5 protein.
Length = 392
Score = 25.4 bits (53), Expect = 6.6
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = +2
Query: 83 SNSLVEINCAS---FNRS*ISNGMVAKFYQKSALLLHYILMNTLYLSLDK---MNCKVDI 244
S ++V ++ S FN + S G V KFY + +L+ + +N Y K N +V +
Sbjct: 141 SKNMVFVSAVSENHFNEATHSIGSVYKFYHNAKFILYSLGLNKFYTQTIKKQFSNLEVRV 200
Query: 245 WN 250
+N
Sbjct: 201 FN 202
>U29154-3|AAA68419.2| 283|Caenorhabditis elegans Hypothetical
protein T07F12.1 protein.
Length = 283
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 182 HYILMNTLYLSLDKMNCKVDIW 247
+Y+L NT YLS ++N + +W
Sbjct: 217 YYLLQNTPYLSCVEVNSREGLW 238
>AF016685-8|AAG24150.1| 340|Caenorhabditis elegans Seven tm
receptor protein 85 protein.
Length = 340
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -1
Query: 280 FCCVYFYLISVPNIHFTIHFVQR*IQCVHQNIMQQQGGLLV 158
FC +Y+ LI++ +HF ++ + C + GG L+
Sbjct: 92 FCAIYYTLITLLVVHFIYRYI---VICDSAKLKYFDGGYLL 129
>U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical
protein F35D2.4 protein.
Length = 747
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 145 HSVTNL*AIEGGAINFYERVRNNWIVITQFNQF 47
H + + + G +NF + RN W++ +F F
Sbjct: 319 HILNSAVRVNGQLLNFANKDRNRWVLTRRFYLF 351
>AF016687-4|AAC48097.1| 183|Caenorhabditis elegans Hypothetical
protein T21D12.12 protein.
Length = 183
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 221 CPTIDTMCSSKYNATTRRTSGRTWPPF 141
CPT + CS +Y+A +SG+ P +
Sbjct: 122 CPTKENTCSLQYDAGKFGSSGKHTPRY 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,806,825
Number of Sequences: 27780
Number of extensions: 94268
Number of successful extensions: 246
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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