Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4a02
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.61 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    24   1.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   4.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.7  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 26  LIVMF*YSLFKCFFYLYFLISTTFYIQNDWSVFFK 130
           +++ F  +   CF Y Y ++ TTFY +  W+   K
Sbjct: 66  VLMFFKEASLYCFNY-YVIVVTTFYKRRTWTRLLK 99


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +1

Query: 589 FFKLI*KTYVYL--LLKNTVI*LWEMVSLKSIITWVCQ 696
           FF L    YV +  LLKN V+   E+  L  I+T +CQ
Sbjct: 278 FFHLSDVRYVMVVYLLKNVVLYGLELFILAKIVTDLCQ 315


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +2

Query: 50  LFKCFFYLYFLISTTFYIQNDWS 118
           + + F Y++  +S T Y+   WS
Sbjct: 132 VLQLFLYIFTYLSVTCYVTYAWS 154


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 417 ISAPATVNVLHLRATHRFLRALIFYCQYYLQT 512
           +S    V++L L  +  F   L+FYC + + T
Sbjct: 62  VSITFNVHLLFLLCSGYFTVHLLFYCPFIIFT 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,561
Number of Sequences: 336
Number of extensions: 2581
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)