Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3p22
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70308-2|CAA94349.1| 212|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z68108-4|CAA92136.1| 246|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z70307-6|CAA94332.1| 210|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF078781-1|AAC26915.2| 258|Caenorhabditis elegans Hypothetical ... 39 0.003
AC006655-3|AAF39874.1| 208|Caenorhabditis elegans Hypothetical ... 38 0.005
AC006655-2|AAF39876.1| 208|Caenorhabditis elegans Hypothetical ... 38 0.005
Z81527-1|CAB04269.3| 290|Caenorhabditis elegans Hypothetical pr... 38 0.007
AC024805-13|AAK39335.1| 246|Caenorhabditis elegans Hypothetical... 38 0.009
Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z82092-1|CAB05010.1| 196|Caenorhabditis elegans Hypothetical pr... 36 0.027
U42839-1|AAM54195.1| 424|Caenorhabditis elegans Venom-allergen-... 35 0.047
U23514-11|AAM48531.1| 287|Caenorhabditis elegans Long protein 1... 35 0.047
U23514-10|AAK95879.1| 301|Caenorhabditis elegans Long protein 1... 35 0.047
U23514-9|AAC46538.1| 312|Caenorhabditis elegans Long protein 1,... 35 0.047
Z70307-5|CAA94331.1| 209|Caenorhabditis elegans Hypothetical pr... 35 0.062
Z70308-3|CAA94350.1| 207|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z70307-4|CAA94330.1| 209|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z70308-6|CAA94344.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.58
U42839-2|AAC69015.1| 425|Caenorhabditis elegans Venom-allergen-... 31 0.77
AF112356-1|AAD27559.1| 425|Caenorhabditis elegans venom allerge... 31 0.77
AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin ... 30 1.3
Z68760-5|CAE17823.1| 161|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z82092-2|CAB05011.1| 212|Caenorhabditis elegans Hypothetical pr... 29 3.1
X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogen... 29 3.1
U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin st... 29 3.1
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 29 3.1
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 29 4.1
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 29 4.1
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 29 4.1
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 29 4.1
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 29 4.1
Z70308-5|CAA94348.1| 207|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical p... 28 7.1
Z47812-6|CAC70105.1| 984|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical pr... 28 7.1
U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein. 28 7.1
>Z70308-2|CAA94349.1| 212|Caenorhabditis elegans Hypothetical
protein F49E11.5 protein.
Length = 212
Score = 46.0 bits (104), Expect = 3e-05
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Frame = +2
Query: 245 ILLLHNRHRDNIAMG-LEAG---QPPATNMRKMYWDYELEEMAELWARQCQKRHDECRNT 412
IL HN R IA+G AG +P A+NM K+ WD LE A+ ++ C H R
Sbjct: 30 ILSRHNYLRSQIALGKYVAGNSTKPSASNMMKLIWDTTLETTAQDYSTGCPTGHSASRAN 89
Query: 413 IRFNALQNMDVRPVVPKVTEAQLLADAVGAWFSGSRVLQSEHVWSFRHGNCSAPGGCNSH 592
I N PVV + T+A+LL + + + +SE +GN NS
Sbjct: 90 IGEN--MYWWTSPVVTQ-TDAELLGN------RSANLWESEFQRFGWNGNLLTEELFNSG 140
Query: 593 -WYST-AAWASTWRLGCSQALCTA 658
++T AWA+T ++GC + C++
Sbjct: 141 IGHATQMAWATTNKIGCGISKCSS 164
>Z68108-4|CAA92136.1| 246|Caenorhabditis elegans Hypothetical
protein T05A10.5 protein.
Length = 246
Score = 43.6 bits (98), Expect = 1e-04
Identities = 40/138 (28%), Positives = 53/138 (38%), Gaps = 6/138 (4%)
Frame = +2
Query: 257 HNRHRDNIAMGLE------AGQPPATNMRKMYWDYELEEMAELWARQCQKRHDECRNTIR 418
HN +R +A G E QP A+ M KM +D LE A+ WA C H + R
Sbjct: 62 HNFYRSRLAKGFEWNGETNTSQPKASQMIKMEYDCMLERFAQNWANNCVFAHS--AHYER 119
Query: 419 FNALQNMDVRPVVPKVTEAQLLADAVGAWFSGSRVLQSEHVWSFRHGNCSAPGGCNSHWY 598
N QN+ + L+ AV W+ + G H Y
Sbjct: 120 PNQGQNLYMSS-FSNPDPRSLIHTAVEKWWQELEEFGTPIDNVLTPELWDLKGKAIGH-Y 177
Query: 599 STAAWASTWRLGCSQALC 652
+ AW T+RLGC A C
Sbjct: 178 TQMAWDRTYRLGCGIANC 195
>Z70307-6|CAA94332.1| 210|Caenorhabditis elegans Hypothetical
protein C39E9.6 protein.
Length = 210
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +2
Query: 236 RYQILLLHNRHRDNIAMG--LEAG--QPPATNMRKMYWDYELEEMAELWARQCQKRHDEC 403
+ IL HN R IA G + G + ATNM KM WD LE+ A+ +A C +H
Sbjct: 23 KQSILNAHNDIRSRIAKGNYVAKGNRKESATNMLKMKWDSSLEQSAQNYANGCHMQHSTN 82
Query: 404 RNTIRFN 424
TI N
Sbjct: 83 DKTIGEN 89
>AF078781-1|AAC26915.2| 258|Caenorhabditis elegans Hypothetical
protein B0545.3 protein.
Length = 258
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = +2
Query: 236 RYQILLL--HNRHRDNIAMGLEAGQ----PPATNMRKMYWDYELEEMAELWARQC 382
R Q L+L HN R +A+G A PPA NM K+ WD ELE A+ A+QC
Sbjct: 48 RLQNLILDKHNEIRSQVALGQYAVDDDYLPPADNMVKLDWDCELELEAQQRAQQC 102
>AC006655-3|AAF39874.1| 208|Caenorhabditis elegans Hypothetical
protein H10D18.2 protein.
Length = 208
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +2
Query: 245 ILLLHNRHRDNIAMGL--EAG--QPPATNMRKMYWDYELEEMAELWARQCQKRH 394
I+ HN R IA+G AG +PPA NMRK+ WD + A+ +A C H
Sbjct: 26 IVKAHNDLRSAIALGNYDAAGTIEPPAANMRKIKWDSTVASSAQQYANTCPDDH 79
>AC006655-2|AAF39876.1| 208|Caenorhabditis elegans Hypothetical
protein H10D18.4 protein.
Length = 208
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +2
Query: 242 QILLLHNRHRDNIAMG--LEAG--QPPATNMRKMYWDYELEEMAELWARQCQKRH 394
QI+ HN+ R IA G + AG +P A+NMRK+ WD + A+ +A C H
Sbjct: 25 QIVDAHNKLRSAIAQGSYVAAGTQEPSASNMRKIVWDETVAAAAQEYAEGCPDDH 79
>Z81527-1|CAB04269.3| 290|Caenorhabditis elegans Hypothetical
protein F35E12.1 protein.
Length = 290
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +2
Query: 245 ILLLHNRHRDNIAMGLEAGQ----PPATNMRKMYWDYELEEMAELWARQCQKRH 394
I+ +HN R IA GL + PPA++M K+ WD + E A+ + +C H
Sbjct: 108 IVKIHNDLRSEIAKGLFLAKGIEKPPASDMMKISWDDSIAESAQTFIEKCPMNH 161
>AC024805-13|AAK39335.1| 246|Caenorhabditis elegans Hypothetical
protein Y51H7C.2 protein.
Length = 246
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +2
Query: 242 QILLLHNRHRDNIAMGLEAGQ----PPATNMRKMYWDYELEEMAELWARQCQKRHD 397
Q L HN R +IA G + PATN+ KM W+ + A+ A +C K HD
Sbjct: 26 QTLDAHNEFRSSIAKGTYVTKGLLHAPATNIMKMKWNVTIATAAQNHANKCPKGHD 81
>Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical
protein F49E11.4 protein.
Length = 213
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 245 ILLLHNRHRDNIAMGLEA----GQPPATNMRKMYWDYELEEMAELWARQCQKRHDECRNT 412
+L +HN R +A+G + +P A+ MRK+ W +L A +A C K H NT
Sbjct: 28 LLNVHNEFRSQLALGQLSFRGVKKPSASMMRKISWSKKLTNAATKFAETCPKNHSVVMNT 87
>Z82092-1|CAB05010.1| 196|Caenorhabditis elegans Hypothetical
protein ZK384.1 protein.
Length = 196
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +2
Query: 236 RYQILLLHNRHRDNIAMGLEAG----QPPATNMRKMYWDYELEEMAELWARQC 382
R Q+L HN+ R +A+G+ + +PPA NM ++ + + E +A+ + C
Sbjct: 23 RQQVLDFHNKLRSQVALGVFSANGTIKPPARNMERLTYGQQFERLAQDYVADC 75
>U42839-1|AAM54195.1| 424|Caenorhabditis elegans
Venom-allergen-like protein protein1, isoform b protein.
Length = 424
Score = 35.1 bits (77), Expect = 0.047
Identities = 42/154 (27%), Positives = 59/154 (38%), Gaps = 8/154 (5%)
Frame = +2
Query: 236 RYQILLLHNRHRDNIAMGLEAG-------QPPATNMRKMYWDYELEEMAELWARQCQKRH 394
R L HN+ R ++A GLEA P A M K+ + +E A WA+ C +H
Sbjct: 236 RQNFLDTHNKLRTSLAKGLEADGIAAGAFAPMAKQMPKLKYSCTVEANARTWAKGCLYQH 295
Query: 395 DECRNTIRFNALQNMDVRPVVPKVTEAQLLADAVGAWFSGSRVLQSEHVWSFRHGNCSAP 574
M +PK+ A+ D+ AW+S L+ V S +
Sbjct: 296 STSAQRPGLGENLYMISINNMPKIQTAE---DSSKAWWS---ELKDFGVGSDNILTQAVF 349
Query: 575 GGCNSHWYSTAAWASTWRLGCSQALC-TATKKSC 673
H Y+ AW T +GC C T T C
Sbjct: 350 DRGVGH-YTQMAWEGTTEIGCFVENCPTFTYSVC 382
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +2
Query: 257 HNRHRDNIAMGLEAGQ----PPATNMRKMYWDYELEEMAELWARQC 382
HN R ++A GLE + N+ ++ WD E+E A+ WA C
Sbjct: 40 HNDARRSMAKGLEPNKCGLLSGGKNVYELNWDCEMEAKAQEWADGC 85
>U23514-11|AAM48531.1| 287|Caenorhabditis elegans Long protein 1,
isoform c protein.
Length = 287
Score = 35.1 bits (77), Expect = 0.047
Identities = 33/115 (28%), Positives = 45/115 (39%)
Frame = +2
Query: 308 PATNMRKMYWDYELEEMAELWARQCQKRHDECRNTIRFNALQNMDVRPVVPKVTEAQLLA 487
PA++M +YW EL A+ A C RH R N +N+ P +
Sbjct: 96 PASDMNMLYWSDELAASAQRHADTCDFRHSRG----RINVGENIWAAPY-------SNYS 144
Query: 488 DAVGAWFSGSRVLQSEHVWSFRHGNCSAPGGCNSHWYSTAAWASTWRLGCSQALC 652
DA+ WF+ V + R G A C H Y WA T +GC + C
Sbjct: 145 DAISIWFN--------EVHNPRCGCNHAYKHCCGH-YVQVVWAKTNLVGCGFSRC 190
>U23514-10|AAK95879.1| 301|Caenorhabditis elegans Long protein 1,
isoform b protein.
Length = 301
Score = 35.1 bits (77), Expect = 0.047
Identities = 33/115 (28%), Positives = 45/115 (39%)
Frame = +2
Query: 308 PATNMRKMYWDYELEEMAELWARQCQKRHDECRNTIRFNALQNMDVRPVVPKVTEAQLLA 487
PA++M +YW EL A+ A C RH R N +N+ P +
Sbjct: 96 PASDMNMLYWSDELAASAQRHADTCDFRHSRG----RINVGENIWAAPY-------SNYS 144
Query: 488 DAVGAWFSGSRVLQSEHVWSFRHGNCSAPGGCNSHWYSTAAWASTWRLGCSQALC 652
DA+ WF+ V + R G A C H Y WA T +GC + C
Sbjct: 145 DAISIWFN--------EVHNPRCGCNHAYKHCCGH-YVQVVWAKTNLVGCGFSRC 190
>U23514-9|AAC46538.1| 312|Caenorhabditis elegans Long protein 1,
isoform a protein.
Length = 312
Score = 35.1 bits (77), Expect = 0.047
Identities = 33/115 (28%), Positives = 45/115 (39%)
Frame = +2
Query: 308 PATNMRKMYWDYELEEMAELWARQCQKRHDECRNTIRFNALQNMDVRPVVPKVTEAQLLA 487
PA++M +YW EL A+ A C RH R N +N+ P +
Sbjct: 96 PASDMNMLYWSDELAASAQRHADTCDFRHSRG----RINVGENIWAAPY-------SNYS 144
Query: 488 DAVGAWFSGSRVLQSEHVWSFRHGNCSAPGGCNSHWYSTAAWASTWRLGCSQALC 652
DA+ WF+ V + R G A C H Y WA T +GC + C
Sbjct: 145 DAISIWFN--------EVHNPRCGCNHAYKHCCGH-YVQVVWAKTNLVGCGFSRC 190
>Z70307-5|CAA94331.1| 209|Caenorhabditis elegans Hypothetical
protein C39E9.5 protein.
Length = 209
Score = 34.7 bits (76), Expect = 0.062
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Frame = +2
Query: 257 HNRHRDNIAMG--LEAG--QPPATNMRKMYWDYELEEMAELWARQCQKRHDECRNTIRFN 424
HN R +IA G + G + ATNM KM WD L + A+ +A C +H + + N
Sbjct: 30 HNAVRSSIAKGEYVAKGTKKDSATNMLKMKWDNSLAQSAQNYANGCPMQHSPDK-SYGEN 88
Query: 425 ALQNMDVRPVVPKVTEAQLLADAVGAWFSGSRVLQSEHVWSFRHGNCSAPGGCNSHWYST 604
P+ Q AV W S ++ W+ + H +
Sbjct: 89 LFWAYSSSPITDLDKYVQ---SAVDTWVSEFQMFG----WNSNKFTTALWNTGIGH-ATQ 140
Query: 605 AAWASTWRLGCSQALCTA 658
AW++T ++GC C A
Sbjct: 141 VAWSATGQVGCGAKNCGA 158
>Z70308-3|CAA94350.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.6 protein.
Length = 207
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 215 SGMTNWMRYQILLLHNRHRDNIAMGLEAG----QPPATNMRKMYWDYELEEMAELWARQC 382
S T+ + I+ HN+ R +IA G Q +NMRK+ WD + A+ +A C
Sbjct: 16 SQFTSTGQQAIVDAHNKLRSSIAKGTYVAKGTTQKSGSNMRKIKWDATVATSAQNYANTC 75
Query: 383 QKRHDE 400
H +
Sbjct: 76 PTGHSQ 81
>Z70307-4|CAA94330.1| 209|Caenorhabditis elegans Hypothetical
protein C39E9.4 protein.
Length = 209
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 245 ILLLHNRHRDNIAMGLEA--G--QPPATNMRKMYWDYELEEMAELWARQC 382
I+ LHN R +A G + G +P +N+RKM WD L A+ +A C
Sbjct: 28 IVDLHNSFRSKLATGTYSINGTLKPAGSNIRKMSWDSTLATSAQTYANTC 77
>Z70308-6|CAA94344.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.10 protein.
Length = 207
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 245 ILLLHNRHRDNIAMGLEAGQ----PPATNMRKMYWDYELEEMAELWARQCQKRH 394
I+ HN R IA G + P TN+ KM WD + A+ +A C H
Sbjct: 26 IINAHNTLRSKIAKGTYVAKGTQKSPGTNLLKMKWDSAVAASAQNYANGCPTGH 79
>U42839-2|AAC69015.1| 425|Caenorhabditis elegans
Venom-allergen-like protein protein1, isoform a protein.
Length = 425
Score = 31.1 bits (67), Expect = 0.77
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 9/155 (5%)
Frame = +2
Query: 236 RYQILLLHNRHRDNIAMGLEAG-------QPPATNMRKMY-WDYELEEMAELWARQCQKR 391
R L HN+ R ++A GLEA P A M K+ + +E A WA+ C +
Sbjct: 236 RQNFLDTHNKLRTSLAKGLEADGIAAGAFAPMAKQMPKLVKYSCTVEANARTWAKGCLYQ 295
Query: 392 HDECRNTIRFNALQNMDVRPVVPKVTEAQLLADAVGAWFSGSRVLQSEHVWSFRHGNCSA 571
H M +PK+ A+ D+ AW+S L+ V S +
Sbjct: 296 HSTSAQRPGLGENLYMISINNMPKIQTAE---DSSKAWWS---ELKDFGVGSDNILTQAV 349
Query: 572 PGGCNSHWYSTAAWASTWRLGCSQALC-TATKKSC 673
H Y+ AW T +GC C T T C
Sbjct: 350 FDRGVGH-YTQMAWEGTTEIGCFVENCPTFTYSVC 383
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +2
Query: 257 HNRHRDNIAMGLEAGQ----PPATNMRKMYWDYELEEMAELWARQC 382
HN R ++A GLE + N+ ++ WD E+E A+ WA C
Sbjct: 40 HNDARRSMAKGLEPNKCGLLSGGKNVYELNWDCEMEAKAQEWADGC 85
>AF112356-1|AAD27559.1| 425|Caenorhabditis elegans venom
allergen-like protein protein.
Length = 425
Score = 31.1 bits (67), Expect = 0.77
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 9/155 (5%)
Frame = +2
Query: 236 RYQILLLHNRHRDNIAMGLEAG-------QPPATNMRKMY-WDYELEEMAELWARQCQKR 391
R L HN+ R ++A GLEA P A M K+ + +E A WA+ C +
Sbjct: 236 RQNFLDTHNKLRTSLAKGLEADGIAAGAFAPMAKQMPKLVKYSCTVEANARTWAKGCLYQ 295
Query: 392 HDECRNTIRFNALQNMDVRPVVPKVTEAQLLADAVGAWFSGSRVLQSEHVWSFRHGNCSA 571
H M +PK+ A+ D+ AW+S L+ V S +
Sbjct: 296 HSTSAQRPGLGENLYMISINNMPKIQTAE---DSSKAWWS---ELKDFGVGSDNILTQAV 349
Query: 572 PGGCNSHWYSTAAWASTWRLGCSQALC-TATKKSC 673
H Y+ AW T +GC C T T C
Sbjct: 350 FDRGVGH-YTQMAWEGTTEIGCFVENCPTFTYSVC 383
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +2
Query: 257 HNRHRDNIAMGLEAGQ----PPATNMRKMYWDYELEEMAELWARQC 382
HN R ++A GLE + N+ ++ WD E+E A+ WA C
Sbjct: 40 HNDARRSMAKGLEPNKCGLLSGGKNVYELNWDCEMEAKAQEWADGC 85
>AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 4 protein.
Length = 1603
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 323 RKMYWDYELEEMAELWARQCQKRHDECRNTI 415
++MYW+ EL + + W R C+ D R+ I
Sbjct: 1086 QQMYWNTELRTVCDKWIRMCKVEMDARRSPI 1116
>Z68760-5|CAE17823.1| 161|Caenorhabditis elegans Hypothetical
protein F36H1.10 protein.
Length = 161
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 354 RWRNCGRVNVRNVTTNAGILLGLMHFKTWTCV 449
RW C +NVR T GI++GL W CV
Sbjct: 2 RWSLCCHINVRIAYTICGIIIGLF----WACV 29
>Z82092-2|CAB05011.1| 212|Caenorhabditis elegans Hypothetical
protein ZK384.2 protein.
Length = 212
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 242 QILLLHNRHRDNIAMG--LEAG--QPPATNMRKMYWDYELEEMAELWARQC 382
+I+ HN R +A G + G +PPA +M KM WD L MA+ A C
Sbjct: 27 EIVDFHNSLRSQLANGDYVVDGVPKPPAKDMMKMKWDPILAGMAKNNAATC 77
>X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogenin
protein.
Length = 1603
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 323 RKMYWDYELEEMAELWARQCQKRHDECRN 409
++MYW+ EL + + W R C+ D R+
Sbjct: 1086 QQMYWNTELRTVCDKWIRMCKVEMDARRS 1114
>U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 5 protein.
Length = 1603
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 323 RKMYWDYELEEMAELWARQCQKRHDECRN 409
++MYW+ EL + + W R C+ D R+
Sbjct: 1086 QQMYWNTELRTVCDKWIRMCKVEMDARRS 1114
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 323 RKMYWDYELEEMAELWARQCQKRHDECRN 409
++MYW+ EL + + W R C+ D R+
Sbjct: 1086 QQMYWNTELRTVCDKWIRMCKVEMDARRS 1114
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 28.7 bits (61), Expect = 4.1
Identities = 29/100 (29%), Positives = 45/100 (45%)
Frame = +2
Query: 212 ASGMTNWMRYQILLLHNRHRDNIAMGLEAGQPPATNMRKMYWDYELEEMAELWARQCQKR 391
+S + W+ +I LL+ RH +N LE Q T DY +E + +K
Sbjct: 297 SSDLLEWINAKIQLLNERHFEN---NLEGVQRQLTEFN----DYRTQEKPPKFD---EKG 346
Query: 392 HDECRNTIRFNALQNMDVRPVVPKVTEAQLLADAVGAWFS 511
E +A++ + RP VP+ E +L+AD AW S
Sbjct: 347 ELEVLLFTLQSAMRANNQRPFVPR--EGKLIADINRAWQS 384
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 28.7 bits (61), Expect = 4.1
Identities = 29/100 (29%), Positives = 45/100 (45%)
Frame = +2
Query: 212 ASGMTNWMRYQILLLHNRHRDNIAMGLEAGQPPATNMRKMYWDYELEEMAELWARQCQKR 391
+S + W+ +I LL+ RH +N LE Q T DY +E + +K
Sbjct: 297 SSDLLEWINAKIQLLNERHFEN---NLEGVQRQLTEFN----DYRTQEKPPKFD---EKG 346
Query: 392 HDECRNTIRFNALQNMDVRPVVPKVTEAQLLADAVGAWFS 511
E +A++ + RP VP+ E +L+AD AW S
Sbjct: 347 ELEVLLFTLQSAMRANNQRPFVPR--EGKLIADINRAWQS 384
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 28.7 bits (61), Expect = 4.1
Identities = 29/100 (29%), Positives = 45/100 (45%)
Frame = +2
Query: 212 ASGMTNWMRYQILLLHNRHRDNIAMGLEAGQPPATNMRKMYWDYELEEMAELWARQCQKR 391
+S + W+ +I LL+ RH +N LE Q T DY +E + +K
Sbjct: 297 SSDLLEWINAKIQLLNERHFEN---NLEGVQRQLTEFN----DYRTQEKPPKFD---EKG 346
Query: 392 HDECRNTIRFNALQNMDVRPVVPKVTEAQLLADAVGAWFS 511
E +A++ + RP VP+ E +L+AD AW S
Sbjct: 347 ELEVLLFTLQSAMRANNQRPFVPR--EGKLIADINRAWQS 384
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 28.7 bits (61), Expect = 4.1
Identities = 29/100 (29%), Positives = 45/100 (45%)
Frame = +2
Query: 212 ASGMTNWMRYQILLLHNRHRDNIAMGLEAGQPPATNMRKMYWDYELEEMAELWARQCQKR 391
+S + W+ +I LL+ RH +N LE Q T DY +E + +K
Sbjct: 297 SSDLLEWINAKIQLLNERHFEN---NLEGVQRQLTEFN----DYRTQEKPPKFD---EKG 346
Query: 392 HDECRNTIRFNALQNMDVRPVVPKVTEAQLLADAVGAWFS 511
E +A++ + RP VP+ E +L+AD AW S
Sbjct: 347 ELEVLLFTLQSAMRANNQRPFVPR--EGKLIADINRAWQS 384
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 28.7 bits (61), Expect = 4.1
Identities = 29/100 (29%), Positives = 45/100 (45%)
Frame = +2
Query: 212 ASGMTNWMRYQILLLHNRHRDNIAMGLEAGQPPATNMRKMYWDYELEEMAELWARQCQKR 391
+S + W+ +I LL+ RH +N LE Q T DY +E + +K
Sbjct: 297 SSDLLEWINAKIQLLNERHFEN---NLEGVQRQLTEFN----DYRTQEKPPKFD---EKG 346
Query: 392 HDECRNTIRFNALQNMDVRPVVPKVTEAQLLADAVGAWFS 511
E +A++ + RP VP+ E +L+AD AW S
Sbjct: 347 ELEVLLFTLQSAMRANNQRPFVPR--EGKLIADINRAWQS 384
>Z70308-5|CAA94348.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.9 protein.
Length = 207
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 257 HNRHRDNIAMGLEAGQ----PPATNMRKMYWDYELEEMAELWARQCQKRHDE 400
HN+ R IA + PAT+MRKM D + A+ +A C H +
Sbjct: 28 HNKLRSAIAKSTYVAKGTKKEPATDMRKMVVDSTVAASAQNYANTCPTGHSK 79
>Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical
protein E02H4.1 protein.
Length = 664
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +2
Query: 551 RHGNCSAPGGCNSHWYSTAAWASTWRLGCSQALCTATKKSCSRF 682
+H C P C Y+T A+ W G Q C K C+ +
Sbjct: 529 KHCKCIQP--CQQDQYTTTYSAAKWPSGSIQTSCDNHSKDCNSY 570
>Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical
protein T05H10.5c protein.
Length = 979
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 155 LKNQHTMCVAFNKQSPRLYASGMTNWMRYQILLLHNRHRDNIAMGLEAGQPPATNMRKMY 334
L ++H +CV Q P L AS M +++ Q+ + N DN+ + + Q P T + +M+
Sbjct: 507 LMSRHLLCVKTQAQDPALMASSM-DFVDKQMKFILNLLCDNLDLLGDDSQLP-TEVSQMF 564
Query: 335 W---DYELEEMAELW 370
+Y LE+ + +
Sbjct: 565 CALPEYFLEDALDFY 579
>Z47812-6|CAC70105.1| 984|Caenorhabditis elegans Hypothetical
protein T05H10.5b protein.
Length = 984
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 155 LKNQHTMCVAFNKQSPRLYASGMTNWMRYQILLLHNRHRDNIAMGLEAGQPPATNMRKMY 334
L ++H +CV Q P L AS M +++ Q+ + N DN+ + + Q P T + +M+
Sbjct: 512 LMSRHLLCVKTQAQDPALMASSM-DFVDKQMKFILNLLCDNLDLLGDDSQLP-TEVSQMF 569
Query: 335 W---DYELEEMAELW 370
+Y LE+ + +
Sbjct: 570 CALPEYFLEDALDFY 584
>Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical
protein T05H10.5a protein.
Length = 980
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 155 LKNQHTMCVAFNKQSPRLYASGMTNWMRYQILLLHNRHRDNIAMGLEAGQPPATNMRKMY 334
L ++H +CV Q P L AS M +++ Q+ + N DN+ + + Q P T + +M+
Sbjct: 508 LMSRHLLCVKTQAQDPALMASSM-DFVDKQMKFILNLLCDNLDLLGDDSQLP-TEVSQMF 565
Query: 335 W---DYELEEMAELW 370
+Y LE+ + +
Sbjct: 566 CALPEYFLEDALDFY 580
>U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein.
Length = 664
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +2
Query: 551 RHGNCSAPGGCNSHWYSTAAWASTWRLGCSQALCTATKKSCSRF 682
+H C P C Y+T A+ W G Q C K C+ +
Sbjct: 529 KHCKCIQP--CQQDQYTTTYSAAKWPSGSIQTSCDNHSKDCNSY 570
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,761,874
Number of Sequences: 27780
Number of extensions: 374734
Number of successful extensions: 1154
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -