Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3p15
(716 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter family|Sch... 29 0.50
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 29 0.50
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 29 0.66
SPCC132.02 |hst2||Sir2 family histone deacetylase Hst2|Schizosac... 29 0.88
SPAC13G7.11 |||mitochondrial inner membrane protein|Schizosaccha... 27 2.7
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 2.7
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 2.7
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 27 2.7
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 27 3.5
SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps90... 27 3.5
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 26 4.7
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 26 6.2
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 26 6.2
SPBC1539.05 |cog3||Golgi transport complex subunit Cog3 |Schizos... 26 6.2
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 25 8.2
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 25 8.2
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 25 8.2
SPBC543.08 |||phosphoinositide biosynthesis protein |Schizosacch... 25 8.2
>SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 791
Score = 29.5 bits (63), Expect = 0.50
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = -2
Query: 295 SIASLCGRFLRLHDTYYRFICTWRYGWILYFFDTNCNAGGWWW 167
S+ S C F HD C W + YFF + W+W
Sbjct: 244 SVLSSCALFKIFHDNDNTKACNWTISRLRYFFIVFVASFIWYW 286
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 29.5 bits (63), Expect = 0.50
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = -1
Query: 716 VISLVLCLSAFFDKTSMSSFNCFIKVSNSFRCLSKFFEDSICCSTVDSTLNVLVLAHSPN 537
+++L C + D + S+ N K F CL + +S ST+ + L++A+ N
Sbjct: 553 LMTLTYCATLTKDDANKSN-NFITKARLGFHCLQMIYRESTYYSTIMEAIKNLLIAYDMN 611
Query: 536 S 534
S
Sbjct: 612 S 612
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 29.1 bits (62), Expect = 0.66
Identities = 19/108 (17%), Positives = 49/108 (45%)
Frame = +1
Query: 379 RPLRRTAEETENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQEFGECANT 558
+P R++ ++++NR+ + + AT + I ++ ++ ++ ++R
Sbjct: 402 KPFRKSRKQSKNRKNKSSVATQFSEESEDIADSITSSTFFPVLPQIRPSTPLNL----KL 457
Query: 559 RTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQS 702
R + S+ + +K FD+ L E L+ K +L+ + + +S
Sbjct: 458 RNFIISSSEDSTSPKAKEFDRPLPSTEFLVAINKSQEALLNNSPNSKS 505
>SPCC132.02 |hst2||Sir2 family histone deacetylase
Hst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 332
Score = 28.7 bits (61), Expect = 0.88
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 565 LSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVL 678
LSV+ST+E+ K D +N + ++ KD++ +L
Sbjct: 290 LSVDSTIEKNASEQKKDDNSVNPFTKIEEKKKDEVTLL 327
>SPAC13G7.11 |||mitochondrial inner membrane
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 269
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -2
Query: 133 DTSFFLLFYSLQGARVWWRWLRY-WFDI 53
+TSFFL + + R WWR+L Y W+++
Sbjct: 63 NTSFFL--HPFKKIRFWWRYLFYGWWNL 88
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +1
Query: 73 ATSTKPLHLATNKTKGKSWYQNMSKDSCRTTATTSPLRCNLYRKNKESTRTSK 231
A +KP+ A +K SW + + + +T TTS LR + ++ R K
Sbjct: 182 ANISKPVVQAQKDSKDNSWDDSSKQSNTQTANTTSNLRVPVNASWSDAGRKEK 234
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.1 bits (57), Expect = 2.7
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +1
Query: 565 LSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLS--KNADKQSTKEI 714
LS EST Q+++S N DK N++ETL +++ + LS ++ +K E+
Sbjct: 808 LSEESTRLQELQSQLNQDK--NQIETLNERISAAADELSSMESINKNQANEL 857
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/70 (24%), Positives = 39/70 (55%)
Frame = -1
Query: 647 IKVSNSFRCLSKFFEDSICCSTVDSTLNVLVLAHSPNS*QNLSLTFSIIESILLLITVFS 468
+ +S+S S++ SI +TV S+ + + P+S Q +S + S +++++ ++ S
Sbjct: 78 LSISSSSSTSSEYSSSSIPITTVSSSDSFI-----PSSSQTISASSSTTDNVIVSSSISS 132
Query: 467 ILSMVTLSTV 438
+S +ST+
Sbjct: 133 TVSSTPVSTI 142
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +1
Query: 586 EQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKE 711
+ Q+E+ +N KH L + +++K + KNA+ E
Sbjct: 282 QNQLENHENSKKHKKNLRKMNQEIKKHAKEAQKNAESNKQPE 323
>SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps901
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 574 ESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEI 714
ESTV +Q + N +K L +L + + ++ KN D+Q ++++
Sbjct: 14 ESTVAEQRKGQSNEEKPLIDLNDSLDEQRNAYNEHCKNHDQQPSQQV 60
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 568 SVESTVEQQIE--SSKNFDKHLNELETLIKQLKDDIEVLSKNADKQST 705
++E+ ++Q +E ++ +++LET I + + VL +NA ST
Sbjct: 804 AIEAQMKQDMEIARARTIKTRIDQLETSITEFNKKLMVLQRNAKNLST 851
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.8 bits (54), Expect = 6.2
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +1
Query: 469 LKTVINNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLI 648
LK ++N +++ I+KV D + E + S + + + + + K+ +L I
Sbjct: 10 LKKAMSN-VETSIDKVLDG--NQIEEMSRGNAKSKDEIIAKLLTEGQALSKNELKLNNTI 66
Query: 649 KQLKDDI---EVLSKNAD-KQSTKEI 714
KQLK + E K D KQ+T E+
Sbjct: 67 KQLKKSLSEAETKLKRLDEKQATPEL 92
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 25.8 bits (54), Expect = 6.2
Identities = 24/116 (20%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Frame = +1
Query: 400 EETENRRVQKTKATVLRVTMDRILKTVINNKIDSMI--EKVRDKFC----QEFGECANTR 561
EET+ + + K + LKT++ +K++ ++ K+ C ++G AN
Sbjct: 527 EETDEEKAAREKLEKEYEEFAKQLKTILGDKVEKVVVSNKIVGSPCLLTTGQYGWSANME 586
Query: 562 TLSV-----ESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEI 714
+ ++++ + S K F+ +N +I +LK +E A+ +S K++
Sbjct: 587 RIMKAQALRDTSMSAYMSSRKTFE--INPKSPIIAELKKKVE--ENGAEDRSVKDL 638
>SPBC1539.05 |cog3||Golgi transport complex subunit Cog3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 6.2
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = +1
Query: 391 RTAEETENRRVQKTKATVLRVTMDRIL-----KTVINNKIDSMIEKVRDKFCQEFGECAN 555
+TA ET+ +R T+ + + D+ L K +NN + + V K G
Sbjct: 441 QTAIETDIQRYSPTEEDLNPIADDKSLLFDLEKLRLNNDEEKLDPDVPQKLAMAQGWYPV 500
Query: 556 TRTLSVESTVEQQIESSKNFDKHLNEL-ETLIKQLKDDIEVLSKNADKQ 699
+ + + ++ +S+ FD+ EL + I+ L D S+N DKQ
Sbjct: 501 VQKSLIILSKIYRLVNSQVFDEIALELVHSCIRSLVDAYRYFSRNNDKQ 549
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 25.4 bits (53), Expect = 8.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 125 LFPFVLFVARCKGLVEVAQVLVRHC 51
++P A+ GL E AQ ++ HC
Sbjct: 761 MYPIAYLTAKSNGLEEKAQQILSHC 785
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 601 SSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTK 708
S N HL E + + DIE L +Q+TK
Sbjct: 700 SQSNIPPHLQEHRQSQQHFQQDIEALQSQQQQQATK 735
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1328
Score = 25.4 bits (53), Expect = 8.2
Identities = 5/21 (23%), Positives = 13/21 (61%)
Frame = -2
Query: 217 WILYFFDTNCNAGGWWWRLFY 155
W+L+++ C + GW++ +
Sbjct: 528 WVLFYYYRGCQSWGWYYNYHF 548
>SPBC543.08 |||phosphoinositide biosynthesis protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 250
Score = 25.4 bits (53), Expect = 8.2
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -2
Query: 178 GWWWR--LFYRNPWTYFDTSFFLLFYSLQ-GARVWWRWLRYWF 59
GW+W +++ + W F S A +WW ++ WF
Sbjct: 68 GWFWTSLVYFYHAWDQKRNKIDFKFISRYIVATLWWMFVTQWF 110
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,804,116
Number of Sequences: 5004
Number of extensions: 56506
Number of successful extensions: 228
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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