Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3p15
(716 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0811 - 7440413-7440712,7441285-7441398,7441448-7441705,744... 32 0.40
03_02_0458 + 8643804-8643904,8643994-8644091,8644206-8644504,864... 30 2.1
02_02_0448 + 10370493-10370568,10370687-10370727,10372372-103724... 30 2.1
04_04_0794 + 28104725-28104829,28105721-28105762,28106470-281065... 29 2.8
09_04_0539 - 18416184-18416830,18417983-18419057 29 3.7
02_03_0333 + 17843605-17843661,17843713-17843881,17845606-178457... 29 3.7
06_03_0269 - 18991203-18991307,18991448-18991525,18992724-189929... 29 4.9
02_01_0524 + 3798019-3798265,3798419-3798651,3798765-3799014,379... 29 4.9
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 29 4.9
12_01_0943 - 9324181-9325095,9326671-9326853 28 6.4
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 28 6.4
03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,771... 28 6.4
12_02_0592 + 20868884-20868954,20869091-20869216,20869554-208698... 28 8.5
08_02_0669 + 19868149-19870179 28 8.5
05_01_0012 - 70296-70398,70494-70648,70737-70843,71138-71216,713... 28 8.5
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 28 8.5
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 28 8.5
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 28 8.5
>12_01_0811 -
7440413-7440712,7441285-7441398,7441448-7441705,
7441825-7441998,7442344-7442514,7442607-7442874,
7443171-7443937,7444437-7445123
Length = 912
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 475 TVINNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQ---QIESSKNFDKHLNELETL 645
+VIN K+DS E+V++ Q+ +TRT + + Q +I +++N D + ELE
Sbjct: 348 SVINKKVDSQKEEVKEVDSQDIAVSNDTRTDTYDGAQAQVPIRISNNRN-DTKVRELELR 406
Query: 646 IKQLKDDI 669
++ L+ ++
Sbjct: 407 VELLEAEL 414
>03_02_0458 +
8643804-8643904,8643994-8644091,8644206-8644504,
8645930-8646460
Length = 342
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +1
Query: 445 LRVTMDRILKTVINNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKH 624
L MDR +K S++EKV+ K +F A+ + +++ E +N +K
Sbjct: 155 LDADMDRFIKAQSERLRQSILEKVQAK---QFEALASVEDKILRKIRDKEAEV-ENINKR 210
Query: 625 LNELETLIKQLKDDIEVLSKNA 690
+ELE IKQL ++ + A
Sbjct: 211 NSELEDQIKQLAVEVGAWQQRA 232
>02_02_0448 +
10370493-10370568,10370687-10370727,10372372-10372441,
10372530-10372678,10373177-10373272,10373347-10373417,
10373547-10373608,10373797-10373860,10374107-10374191,
10374281-10374407,10374494-10374567,10374804-10374858,
10374961-10375085,10375297-10375452
Length = 416
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -1
Query: 434 FVFCTLRFSVSSAVLRKGRILVEVEV---KGWAHNQARVDQGVQQLHPK*HRISLWSFSP 264
FV+C RFS+ + ++ +++ VE KG+ H + D + L K +++ + F
Sbjct: 93 FVYCGRRFSLKTVLMLADQMITRVEFMHSKGYLHRDIKPDNFLMGLGRKANQVYIIDFGL 152
Query: 263 VARH 252
R+
Sbjct: 153 AKRY 156
>04_04_0794 +
28104725-28104829,28105721-28105762,28106470-28106544,
28106811-28106950,28107036-28107093,28107239-28107241,
28107740-28107849,28108562-28108648,28108773-28108856,
28109212-28109277,28109377-28109488,28109949-28110149
Length = 360
Score = 29.5 bits (63), Expect = 2.8
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = -2
Query: 175 WWWRLFYRNPWTYFDTSFFLLFYSLQGARVWWRW 74
+WW +F + T + +F++ F+ L WW++
Sbjct: 177 FWWYIFEQTVLTVWTVAFYIQFFYLGIVVSWWKF 210
>09_04_0539 - 18416184-18416830,18417983-18419057
Length = 573
Score = 29.1 bits (62), Expect = 3.7
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = +1
Query: 442 VLRVTMDRILKTVINNKIDSMIEKVRDKFCQE----FGECANTRTLSVESTVEQQIESSK 609
V + M R + I N+I IE +R++ C+ E + + + + E+ E K
Sbjct: 343 VQSIAMLRSAEEAIENEIQKFIE-MRNETCENSANNHSETEWSSSCHFDESTEELSEKLK 401
Query: 610 NFDKHLNELETLIKQLKDDI---EVLSKNADKQ 699
+ LNE TLI +I +VL+ KQ
Sbjct: 402 LLESRLNEASTLINDKDSEILELDVLNHKQPKQ 434
>02_03_0333 +
17843605-17843661,17843713-17843881,17845606-17845723,
17845725-17846358,17846457-17846526,17847680-17847804,
17848146-17848270,17848638-17848730,17849714-17849753
Length = 476
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 115 KGKSWYQNMSKDSCRTTATTSPLRCNLYRKNKESTRTSKCK*TYSMC 255
KG++++ + + C T+T P + + + + TR +KCK C
Sbjct: 381 KGETYHLSRCTEICTITSTFVPRSLDYEKTDAQGTRQNKCKVVLHSC 427
>06_03_0269 -
18991203-18991307,18991448-18991525,18992724-18992910,
18993096-18993265,18994228-18994306,18995006-18995220,
18995346-18995429,18995732-18995734
Length = 306
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -2
Query: 247 YRFICTWRYGWILYF-FDTNCNAGGWWWRLF 158
Y F + GW++Y F G WW RLF
Sbjct: 183 YTFGVIFNMGWLIYGDFKAGFERGPWWQRLF 213
>02_01_0524 +
3798019-3798265,3798419-3798651,3798765-3799014,
3799104-3799249,3799372-3799577,3799721-3799845,
3800154-3800734
Length = 595
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 130 YQNMSKDSCRTTATTSPLRCNLYRKNKESTRTSK 231
YQ M ++ CR T L N+Y K K+ + K
Sbjct: 268 YQRMKRERCRANTETFTLMINVYGKAKQPMSSMK 301
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 28.7 bits (61), Expect = 4.9
Identities = 26/101 (25%), Positives = 42/101 (41%)
Frame = +1
Query: 409 ENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVE 588
ENR K + T+ + D + N+ DS V+ C E E + + V ST E
Sbjct: 2689 ENRHGAKDEQTLSLIEPDTGNAEKLPNEADS----VQSPPCTEQEESIESSYVEVRSTTE 2744
Query: 589 QQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKE 711
Q+ES ++ T ++ IE L + K++ E
Sbjct: 2745 GQVESEVIETNEEDQHTTAGGHTEEQIENLHDDKSKETCSE 2785
>12_01_0943 - 9324181-9325095,9326671-9326853
Length = 365
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 493 IDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIES 603
++S EK+RD+FC F L VE +QIE+
Sbjct: 155 VNSSWEKLRDRFCLAFFPVTRITALQVEILSFKQIEN 191
>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 28.3 bits (60), Expect = 6.4
Identities = 25/134 (18%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Frame = +1
Query: 325 STLAWLCAQPFTSTSTKIRPLRRTAEETENRRVQKTK------ATVLRVTMDRILKTVIN 486
S L + CA K+R L+ A +TE +V+K K R+ +++ L++ +
Sbjct: 895 SVLIYQCAWRIQVAKGKLRKLKMAARDTEALKVEKGKLEEHIEELSSRLCLEKKLRSDLE 954
Query: 487 NKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKD- 663
N + I K++ + R + ++ +E + ++ ++ L K++++
Sbjct: 955 NSKATEISKLQTTLHEMERRVEEARATQERESAKKVVEEALVLER--EKIALLTKEVEEL 1012
Query: 664 DIEVLSKNADKQST 705
+ +L + +K +T
Sbjct: 1013 KVLLLKEQEEKNAT 1026
>03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,
7712019-7712214,7712449-7712832,7712884-7714804,
7714906-7714966,7715952-7716371
Length = 1059
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 505 IEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSK 684
+EK ++ + + +L+ E+ ++ ES K+ + ELE IK L+ IEVL+
Sbjct: 817 LEKSLEELTSKLVASEKSNSLA-ETQLKCMAESYKSLESRKAELENEIKVLQSKIEVLTA 875
Query: 685 NADKQ 699
D +
Sbjct: 876 ELDDE 880
>12_02_0592 +
20868884-20868954,20869091-20869216,20869554-20869862,
20870017-20870300,20870410-20871305,20871586-20871642,
20872293-20872340,20873046-20873114
Length = 619
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 278 WSFSPVARHIL*VHLHLEVRVDSLFFRYKLQRRGLVVAVVL 156
W P+ RHI+ +H+ E + + LQ+RG +VL
Sbjct: 87 WVDDPITRHIISLHIDKEEGEGFMLWPVVLQKRGSYYILVL 127
>08_02_0669 + 19868149-19870179
Length = 676
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 31 KLTHENLQCRTST*ATSTKPLHLATNKTKGKSWYQNMSKDSCRTTATT 174
++ E LQC T T P+ LAT +T ++ + K CRT T
Sbjct: 267 RINPEGLQCPI-TLELMTDPVTLATGQTYDRASIKRWVKSGCRTCPVT 313
>05_01_0012 -
70296-70398,70494-70648,70737-70843,71138-71216,
71343-71423,71556-72581
Length = 516
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 160 FYRNPWTYFDTSFFLLFYSLQGARVWWRWLRYWFDIADF 44
+YR+ W + LL GA WW W+ W + A F
Sbjct: 25 WYRSWWKTTEAGGPLLPPPAAGAGPWWVWVWQWRETAAF 63
>03_01_0049 +
418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = +1
Query: 481 INNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLK 660
I N + IE+++ + CQ E + L S + I SSK + +LE + +
Sbjct: 554 IPNDSNLQIEELKSQICQLEEELRSKELLHTGSFADASISSSKVLQEKCADLELKLLNFR 613
Query: 661 DDIEVLSKNADK 696
I L + K
Sbjct: 614 SQIYELEEKFQK 625
>02_05_0702 -
31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 27.9 bits (59), Expect = 8.5
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Frame = +1
Query: 388 RRTAEETENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQ-EFGECANTRT 564
R +A+ E R ++ LR + +R+ ++++ + + + C + AN +
Sbjct: 220 RMSAKVAELERETSESSSSLRRSKERV------SELEQRVSYMEKELCSTKDAAAANEQR 273
Query: 565 LSVE-STV----EQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKE 711
L+ E STV E ESS+ + K ELE +IK L+ + + ++ KE
Sbjct: 274 LAAELSTVMKLAELHKESSEEWSKKAGELEGVIKALETHLTQVEDEYKEKLEKE 327
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +1
Query: 484 NNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKD 663
+N++ S++E RD +E + +EST ++ ++ K ELE L+KQL+
Sbjct: 592 SNELASIVE-ARDNLKKELLDVFK----KLESTSQELVDERKTVTTLNRELEALVKQLQM 646
Query: 664 DIE 672
D E
Sbjct: 647 DSE 649
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,415,590
Number of Sequences: 37544
Number of extensions: 342349
Number of successful extensions: 1199
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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