Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3p12
         (725 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058550-1|AAL13779.1|  560|Drosophila melanogaster LD24704p pro...    35   0.098
AL034388-1|CAB65861.1|  469|Drosophila melanogaster EG:67A9.2 pr...    35   0.098
AE014298-331|AAF45722.1|  560|Drosophila melanogaster CG16903-PA...    35   0.098
AE014134-1839|AAF52914.1|  553|Drosophila melanogaster CG5375-PA...    30   2.8  
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    29   8.5  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    29   8.5  

>AY058550-1|AAL13779.1|  560|Drosophila melanogaster LD24704p
           protein.
          Length = 560

 Score = 35.1 bits (77), Expect = 0.098
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +3

Query: 180 KERRRTDSNTPWRRSPNSNSP*KTNTMTPARGRNDRNTLTAPTR 311
           + R RT S TP  RSP S SP +  T    R R+ R+   +P +
Sbjct: 398 RSRTRTHSRTPRSRSPRSRSPSRERTKKTHRSRSSRSRSRSPPK 441


>AL034388-1|CAB65861.1|  469|Drosophila melanogaster EG:67A9.2
           protein.
          Length = 469

 Score = 35.1 bits (77), Expect = 0.098
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +3

Query: 180 KERRRTDSNTPWRRSPNSNSP*KTNTMTPARGRNDRNTLTAPTR 311
           + R RT S TP  RSP S SP +  T    R R+ R+   +P +
Sbjct: 398 RSRTRTHSRTPRSRSPRSRSPSRERTKKTHRSRSSRSRSRSPPK 441


>AE014298-331|AAF45722.1|  560|Drosophila melanogaster CG16903-PA
           protein.
          Length = 560

 Score = 35.1 bits (77), Expect = 0.098
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +3

Query: 180 KERRRTDSNTPWRRSPNSNSP*KTNTMTPARGRNDRNTLTAPTR 311
           + R RT S TP  RSP S SP +  T    R R+ R+   +P +
Sbjct: 398 RSRTRTHSRTPRSRSPRSRSPSRERTKKTHRSRSSRSRSRSPPK 441


>AE014134-1839|AAF52914.1|  553|Drosophila melanogaster CG5375-PA
           protein.
          Length = 553

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 7/114 (6%)
 Frame = +2

Query: 257 DDTGPGAKRPEYAYSTYKNLQDAIIAYLDDPDTKLPESEKAIAIQKL--FKNPNYYPRQQ 430
           D T P     E    T+KN QD+I++  D+ +T + E E     + +    N NY    +
Sbjct: 49  DPTFPSKMAKESGSETFKNGQDSILSNCDNGNTYISEEESVNRSENIPDIVNENYSATSE 108

Query: 431 IQR---HYPKTVEEYT-GYNAETERPVYKYTIPEKKPTYYGEEENINL-GNFEG 577
             +     P  +   +  Y    E P +  TI  K       +  I++ G+F G
Sbjct: 109 NSKRALQKPDLIYNLSQNYTTNPEFPSWSCTINSKYEGQLQGQSPIDIVGDFGG 162


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +2

Query: 455   VEEYTGYNAETERPVYK--YTIPEKKPTYYGEEENINLGNFEGNGLSLFKTEKRPEPLNL 628
             +E+Y  Y +  E P  K  Y  PEK P    ++E++ L    G G    K E+ PE + L
Sbjct: 13040 LEKYEKYISSEEEPEEKTPYKKPEKAPKPEEKQEDVKLKL--GKGKKKPKEEEAPENVTL 13097

Query: 629   R 631
             +
Sbjct: 13098 K 13098


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
             isoform C protein.
          Length = 18074

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +2

Query: 455   VEEYTGYNAETERPVYK--YTIPEKKPTYYGEEENINLGNFEGNGLSLFKTEKRPEPLNL 628
             +E+Y  Y +  E P  K  Y  PEK P    ++E++ L    G G    K E+ PE + L
Sbjct: 14899 LEKYEKYISSEEEPEEKTPYKKPEKAPKPEEKQEDVKLKL--GKGKKKPKEEEAPENVTL 14956

Query: 629   R 631
             +
Sbjct: 14957 K 14957


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,547,875
Number of Sequences: 53049
Number of extensions: 743425
Number of successful extensions: 2413
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2413
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)