Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3p12
         (725 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    25   0.55 
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    24   1.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    24   1.7  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   9.0  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   9.0  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   9.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.0  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   9.0  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 14/45 (31%), Positives = 17/45 (37%)
 Frame = +1

Query: 268 PGGETTGIRLQHLQEFTRCHHSLFGRPRHQAAGERKSYSHPETIQ 402
           P   T G    H+      HHS    P HQ +      S+P  IQ
Sbjct: 414 PHHHTMGHGHSHIHATPHHHHSHAATPHHQHSTPLAHSSYPAAIQ 458


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 386 IQKLFKNPNYYPRQQIQRHYPKTVEEYTGY 475
           I  +FKN +   R+ I   Y    E Y GY
Sbjct: 412 INNIFKNMSQIEREAITFQYTDWEEVYNGY 441


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 386 IQKLFKNPNYYPRQQIQRHYPKTVEEYTGY 475
           I  +FKN +   R+ I   Y    E Y GY
Sbjct: 412 INNIFKNMSQIEREAITFQYTDWEEVYNGY 441


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 467 TGYNAETERPVYKYTIPEKKPTYY 538
           TG    TE     YT+ + KP  Y
Sbjct: 131 TGCGERTEGRCLHYTVDKSKPKVY 154


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 467 TGYNAETERPVYKYTIPEKKPTYY 538
           TG    TE     YT+ + KP  Y
Sbjct: 136 TGCGERTEGRCLHYTVDKSKPKVY 159


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -1

Query: 506 ICKRVFQFLHYSRCILQRFSDSVFGFA 426
           IC R      Y++CI +   D+V   A
Sbjct: 30  ICDRSLPQKEYNQCIAEAVRDAVVSLA 56


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 296 YSTYKNLQDAIIAYLDDPDTKLPES 370
           Y    N     I+Y+ DPD +  ES
Sbjct: 361 YGDLHNFGHVAISYIHDPDHRYLES 385


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 467 TGYNAETERPVYKYTIPEKKPTYY 538
           TG    TE     YT+ + KP  Y
Sbjct: 136 TGCGERTEGRCLHYTVDKSKPKVY 159


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,823
Number of Sequences: 438
Number of extensions: 4927
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)