Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3p10
         (752 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099000-2|AAK71875.1|  337|Caenorhabditis elegans Serpentine re...    31   1.2  
Z68315-3|CAA92670.1|  430|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF039040-4|AAB94182.1|  368|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p...    29   2.7  
AL021180-1|CAA15980.1|  383|Caenorhabditis elegans Hypothetical ...    29   3.5  
AF303252-1|AAG50210.1|  383|Caenorhabditis elegans 3E324 protein.      29   3.5  
Z30423-3|CAA83005.2|  456|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AL117206-3|CAB60451.1|  265|Caenorhabditis elegans Hypothetical ...    28   6.2  
U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>AF099000-2|AAK71875.1|  337|Caenorhabditis elegans Serpentine
           receptor, class h protein128 protein.
          Length = 337

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 434 FRSCKLHRPYKQRSKLFLRPCCIQWR 357
           F +  +H+PY++  K+FL P C+ WR
Sbjct: 293 FTTLAVHKPYRESLKVFL-PTCMTWR 317


>Z68315-3|CAA92670.1|  430|Caenorhabditis elegans Hypothetical
           protein F28C6.3 protein.
          Length = 430

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 523 SSYSTPFIT-QRSPALSLGLTADQTKMAVGYGDSSIKVYDME 645
           S Y T ++T  ++P  +    +D + +A G  D SIK+ D+E
Sbjct: 98  SEYETIYLTVHKAPCRAAAFNSDGSLVATGSADCSIKIMDVE 139


>AF039040-4|AAB94182.1|  368|Caenorhabditis elegans Hypothetical
           protein T22B11.2 protein.
          Length = 368

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 47  YHYKNEENPVIWYPLFHKTRLKEKKVYAWIQDNFAKFLKG 166
           YH   +  P  +Y LF KTRL    +Y ++  +F  + KG
Sbjct: 143 YHTVFDGLPESYYKLFWKTRLALLYIYKYVSKDFDWYFKG 182


>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical
           protein C26C6.1a protein.
          Length = 1883

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 50  HYKNEENPVIWYPLFHKTRLKEKKVYAWIQDNFAKFLKGTANNITY 187
           +Y+  + P+    + HK ++ E   Y    D+F  F+K   NN+TY
Sbjct: 81  YYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFIK---NNLTY 123


>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
           protein C26C6.1a protein.
          Length = 1883

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 50  HYKNEENPVIWYPLFHKTRLKEKKVYAWIQDNFAKFLKGTANNITY 187
           +Y+  + P+    + HK ++ E   Y    D+F  F+K   NN+TY
Sbjct: 81  YYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFIK---NNLTY 123


>AL021180-1|CAA15980.1|  383|Caenorhabditis elegans Hypothetical
           protein Y44F5A.1 protein.
          Length = 383

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
 Frame = +1

Query: 556 SPALSLGLTADQTKMAVGYGDSSIKVYDM-----ETQEIW 660
           +P L +    D +++ VG+ D SI+ YD      E QEIW
Sbjct: 7   NPPLCMKSNKDGSRLVVGFVDGSIRFYDTQQHEEEFQEIW 46


>AF303252-1|AAG50210.1|  383|Caenorhabditis elegans 3E324 protein.
          Length = 383

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
 Frame = +1

Query: 556 SPALSLGLTADQTKMAVGYGDSSIKVYDM-----ETQEIW 660
           +P L +    D +++ VG+ D SI+ YD      E QEIW
Sbjct: 7   NPPLCMKSNKDGSRLVVGFVDGSIRFYDTQQHEEEFQEIW 46


>Z30423-3|CAA83005.2|  456|Caenorhabditis elegans Hypothetical
           protein T20G5.4 protein.
          Length = 456

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 196 VLHGKWLYYDSTVFSKRISCYCRTFIRLNSDAPR*YR 306
           VL   W  YD   F   I+C   T+IR +S+  + YR
Sbjct: 89  VLRRFWYLYDIIGFIDNIACSTATYIRGDSERAKQYR 125


>AL117206-3|CAB60451.1|  265|Caenorhabditis elegans Hypothetical
           protein Y67A10A.5 protein.
          Length = 265

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
 Frame = +3

Query: 21  FRNTLKTLNII-----IKMKKIP*FGIHFFIKRD*KKRKSTLGFKIILLN 155
           FRN +KTL ++     + ++ IP F  HF+IK D   R + +G + +LLN
Sbjct: 156 FRN-VKTLKLLGDYGSLSIETIPYF-THFYIKVDFFTRDNAIGIRDVLLN 203


>U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical
           protein C54G7.4 protein.
          Length = 1199

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +1

Query: 553 RSPALSLGLTADQTKMAVGYGDSSIKVYDMETQEIWDIRCQV 678
           +S  +S+    + TK+A+ Y D ++ V  +E   IW+   ++
Sbjct: 113 KSVVVSICWNLEGTKIAIAYADGNVIVGTLEGNRIWNKELEI 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,973,049
Number of Sequences: 27780
Number of extensions: 360196
Number of successful extensions: 942
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)