Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3o19
         (756 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2236|AAF49850.1|  451|Drosophila melanogaster CG11253-P...   177   2e-44
AY113309-1|AAM29314.1|  451|Drosophila melanogaster AT27448p pro...   176   2e-44
AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,...    29   6.8  

>AE014296-2236|AAF49850.1|  451|Drosophila melanogaster CG11253-PA
           protein.
          Length = 451

 Score =  177 bits (430), Expect = 2e-44
 Identities = 84/219 (38%), Positives = 138/219 (63%)
 Frame = +3

Query: 96  LNALDAGELDLFVESMEPSRIDSIGNQAWVDWHIRLQKLNQQAVLEASSMREELTKETLI 275
           +N +   E+ LFVES+ P  +  +G+  W++ H  +  L+QQA LE S  REE  KE LI
Sbjct: 2   VNFVHPEEMYLFVESIRPFEVREVGSPKWLEVHEMILGLSQQAALELSQNREEEVKEFLI 61

Query: 276 SCGKLPVLVYEAICIQVWKIKIYPQIVKLEPAPNNTFGLYMVLYHEAAAVGLLETVLFHE 455
           S  KL VL++EA C+ +WK ++ P +++++P P  TF +Y VLYHEAA V LL+  L+H 
Sbjct: 62  SRDKLRVLIHEAYCVTLWKTRVLPHLLEIDPNPQATFLIYTVLYHEAALVALLDVCLYHP 121

Query: 456 DGATCISEIAIDLLQYALDQLTALLALINTGYLKPISVNDIECESPIEELERQKRDLQFD 635
            G   + E  +DL+ Y    ++ ++ L++ GY +  +  D++ E+ + ELERQKRD  + 
Sbjct: 122 SGCETLQESVLDLIDYCAQAISQVIGLVSMGYHENETKLDVD-EAVLTELERQKRDFIYK 180

Query: 636 ISMRCISIVRYLAEHMEVAGIGASISTNIYKTHDVPSLL 752
           I +RCIS++ Y+A+++ +  + A  +  +  THD+P L+
Sbjct: 181 IGLRCISVLNYIADNVTLFHLSA--ARRLLVTHDIPWLM 217


>AY113309-1|AAM29314.1|  451|Drosophila melanogaster AT27448p
           protein.
          Length = 451

 Score =  176 bits (429), Expect = 2e-44
 Identities = 84/219 (38%), Positives = 138/219 (63%)
 Frame = +3

Query: 96  LNALDAGELDLFVESMEPSRIDSIGNQAWVDWHIRLQKLNQQAVLEASSMREELTKETLI 275
           +N +   E+ LFVES+ P  +  +G+  W++ H  +  L+QQA LE S  REE  KE LI
Sbjct: 2   VNFVHPEEMYLFVESIRPFEVREVGSPKWLEVHEMILGLSQQAALELSQNREEEVKEFLI 61

Query: 276 SCGKLPVLVYEAICIQVWKIKIYPQIVKLEPAPNNTFGLYMVLYHEAAAVGLLETVLFHE 455
           S  KL VL++EA C+ +WK ++ P +++++P P  TF +Y VLYHEAA V LL+  L+H 
Sbjct: 62  SRDKLRVLIHEAYCVTLWKTRVLPHLLEIDPNPQATFLIYTVLYHEAALVALLDMCLYHP 121

Query: 456 DGATCISEIAIDLLQYALDQLTALLALINTGYLKPISVNDIECESPIEELERQKRDLQFD 635
            G   + E  +DL+ Y    ++ ++ L++ GY +  +  D++ E+ + ELERQKRD  + 
Sbjct: 122 SGCETLQESVLDLIDYCAQAISQVIGLVSMGYHENETKLDVD-EAVLTELERQKRDFIYK 180

Query: 636 ISMRCISIVRYLAEHMEVAGIGASISTNIYKTHDVPSLL 752
           I +RCIS++ Y+A+++ +  + A  +  +  THD+P L+
Sbjct: 181 IGLRCISVLNYIADNVTLFHLSA--ARRLLVTHDIPWLM 217


>AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,
            isoform A protein.
          Length = 1893

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 407  SRSSRGGTAGNCFVSRGRRDLYLRN 481
            SRSS GGT G C +   RRD  + N
Sbjct: 1147 SRSSNGGTIGPCNLKAFRRDFMISN 1171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,940,023
Number of Sequences: 53049
Number of extensions: 722313
Number of successful extensions: 1632
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)