Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3o14
         (273 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL163302-3|CAB90483.1|  592|Homo sapiens human reduced folate ca...    28   4.6  

>AL163302-3|CAB90483.1|  592|Homo sapiens human reduced folate
           carrier (RFC) protein.
          Length = 592

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 262 RSSWTPTAXXPLAXARGRRRSENETSPSLPY 170
           R+S  PT+  P   +RG R   NE +P L Y
Sbjct: 45  RASSPPTSWGPTRTSRGSRHVTNEITPVLSY 75


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,039,179
Number of Sequences: 237096
Number of extensions: 316791
Number of successful extensions: 1024
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 76,859,062
effective HSP length: 68
effective length of database: 60,736,534
effective search space used: 1336203748
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)