Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3o14
         (273 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34800-4|CAA84323.2|  441|Caenorhabditis elegans Hypothetical pr...    26   3.2  
Z92833-9|CAD54141.2|  665|Caenorhabditis elegans Hypothetical pr...    26   4.2  
AL023842-11|CAD54168.2|  665|Caenorhabditis elegans Hypothetical...    26   4.2  
Z81050-11|CAN86585.1|  399|Caenorhabditis elegans Hypothetical p...    25   9.7  

>Z34800-4|CAA84323.2|  441|Caenorhabditis elegans Hypothetical
           protein F45H7.4 protein.
          Length = 441

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 81  HVAWHEQRQVKQHSNQRPP 25
           H A   QRQ+K+H + +PP
Sbjct: 396 HTALKNQRQIKKHHSPQPP 414


>Z92833-9|CAD54141.2|  665|Caenorhabditis elegans Hypothetical
           protein F38A6.3d protein.
          Length = 665

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -1

Query: 69  HEQRQVKQHSNQRPPQHRPHEHS 1
           H+ R+V+Q  ++ P QHRPH H+
Sbjct: 549 HKVREVEQ-LDRLPRQHRPHCHT 570


>AL023842-11|CAD54168.2|  665|Caenorhabditis elegans Hypothetical
           protein F38A6.3d protein.
          Length = 665

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -1

Query: 69  HEQRQVKQHSNQRPPQHRPHEHS 1
           H+ R+V+Q  ++ P QHRPH H+
Sbjct: 549 HKVREVEQ-LDRLPRQHRPHCHT 570


>Z81050-11|CAN86585.1|  399|Caenorhabditis elegans Hypothetical
           protein C50B6.14a protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 265 RRSSWTPTAXXPLAXARGRRRSENETSPSLPYPISHNSCI 146
           R SS+ P    P+    G    +N  SPS P P+SH   +
Sbjct: 162 RASSYNPHWAEPMP---GWPLLDNNLSPSRPPPLSHEKLV 198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,937,888
Number of Sequences: 27780
Number of extensions: 44406
Number of successful extensions: 169
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)