Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3o11
         (697 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA...    32   0.86 
AE014134-2953|AAN11009.1|  838|Drosophila melanogaster CG31791-P...    29   4.6  
BT003749-1|AAO41413.1|  489|Drosophila melanogaster RH68252p pro...    29   8.0  
AY058493-1|AAL13722.1|  300|Drosophila melanogaster GM14682p pro...    29   8.0  
AE013599-1732|AAF58366.1|  489|Drosophila melanogaster CG6050-PA...    29   8.0  

>AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA
           protein.
          Length = 841

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -3

Query: 269 PAKPSTFSTQHIRQRPPRSHSICSSYTHCLLH*E*SRIPHFELDTAPHNHH 117
           P +P+    QH +Q PP  H  C    H       S  PH    T+PH+HH
Sbjct: 134 PQQPAPPVQQHQQQPPPPLHH-CQQRKH-------SHSPHHSRHTSPHSHH 176


>AE014134-2953|AAN11009.1|  838|Drosophila melanogaster CG31791-PA
           protein.
          Length = 838

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
 Frame = +2

Query: 272 KQSVNKSRISQDISKPLLVHETVKSEVE-GRSALSMLEIVEGKGLINRVFETKMPQSSCA 448
           K   +  RI + +S   L  E+  S ++  R+AL  +++ EG  L + +      +   +
Sbjct: 626 KDLKDNCRIKEGMSNSSLAVESSVSSLDINRTAL--VDLFEGSSLTDPIQMRYHIKWVNS 683

Query: 449 VSDREYLDHCIIERRQSLKLTKKPASTKLKGKSSKADTLTNSPKMDSADEVTKLKKAMYE 628
             D+  + +C   +R+ L L K+    +LK K  +  T+  S +M  + EV KLK    E
Sbjct: 684 CMDQRLMLNC---KREDL-LRKE--LMELKTKLEQDMTVQRSSEMIYSWEVEKLKTRNRE 737

Query: 629 WDAKHPKSME 658
           W+ K  + +E
Sbjct: 738 WEVKLERDLE 747


>BT003749-1|AAO41413.1|  489|Drosophila melanogaster RH68252p
           protein.
          Length = 489

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 21/95 (22%), Positives = 43/95 (45%)
 Frame = +2

Query: 410 RVFETKMPQSSCAVSDREYLDHCIIERRQSLKLTKKPASTKLKGKSSKADTLTNSPKMDS 589
           +VFE   P   C V    ++DH   +   +  +TK  A  +L  +S K + + N+P+  +
Sbjct: 74  KVFERTKPH--CNVGTIGHVDHG--KTTLTAAITKVLADKQL-AESKKYNEIDNAPEEKA 128

Query: 590 ADEVTKLKKAMYEWDAKHPKSMEPPGHSPALTHCV 694
                 +    Y+ + +H    + PGH+  + + +
Sbjct: 129 RGITINVAHVEYQTETRHYGHTDCPGHADYIKNMI 163


>AY058493-1|AAL13722.1|  300|Drosophila melanogaster GM14682p
           protein.
          Length = 300

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 21/95 (22%), Positives = 43/95 (45%)
 Frame = +2

Query: 410 RVFETKMPQSSCAVSDREYLDHCIIERRQSLKLTKKPASTKLKGKSSKADTLTNSPKMDS 589
           +VFE   P   C V    ++DH   +   +  +TK  A  +L  +S K + + N+P+  +
Sbjct: 74  KVFERTKPH--CNVGTIGHVDHG--KTTLTAAITKVLADKQL-AESKKYNEIDNAPEEKA 128

Query: 590 ADEVTKLKKAMYEWDAKHPKSMEPPGHSPALTHCV 694
                 +    Y+ + +H    + PGH+  + + +
Sbjct: 129 RGITINVAHVEYQTETRHYGHTDCPGHADYIKNMI 163


>AE013599-1732|AAF58366.1|  489|Drosophila melanogaster CG6050-PA
           protein.
          Length = 489

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 21/95 (22%), Positives = 43/95 (45%)
 Frame = +2

Query: 410 RVFETKMPQSSCAVSDREYLDHCIIERRQSLKLTKKPASTKLKGKSSKADTLTNSPKMDS 589
           +VFE   P   C V    ++DH   +   +  +TK  A  +L  +S K + + N+P+  +
Sbjct: 74  KVFERTKPH--CNVGTIGHVDHG--KTTLTAAITKVLADKQL-AESKKYNEIDNAPEEKA 128

Query: 590 ADEVTKLKKAMYEWDAKHPKSMEPPGHSPALTHCV 694
                 +    Y+ + +H    + PGH+  + + +
Sbjct: 129 RGITINVAHVEYQTETRHYGHTDCPGHADYIKNMI 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,716,359
Number of Sequences: 53049
Number of extensions: 704824
Number of successful extensions: 1672
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1672
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)