Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3n24
         (496 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    27   0.46 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.6  
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    23   7.6  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    23   7.6  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           22   10.0 

>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 26.6 bits (56), Expect = 0.46
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 24  YGYLN*WKEFK*TENNDNRIYSSRRQHTKYINCRKQAKN 140
           +G L  W+E    ++   + + S   HTK++  RK  +N
Sbjct: 204 FGKLLQWRELMEKDDAVKQSFISTEDHTKFLQSRKNGEN 242


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = -2

Query: 306 CSIQRNSFFSVKAHFLCFF-LTHTFYL*KLISNLCPFPQTKRSSYNK*YKRNTISKS 139
           C   R+ +F   + +  +    +  YL K+  NLC +P +    YN   K     KS
Sbjct: 430 CQRSRSIYFDTHSLYCSYNRFRYRRYLSKIQRNLCRWPDSFWRFYNSKTKSTHTPKS 486


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 424 YNVFKVGIVNCVFLIHLFPMV*GLVCFPNYQYPIF 320
           Y +    +V C  L++ FP++  L C+ +  Y IF
Sbjct: 208 YQIIYNVLVMC--LMYTFPLIVILYCYGSIYYEIF 240


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 424 YNVFKVGIVNCVFLIHLFPMV*GLVCFPNYQYPIF 320
           Y +    +V C  L++ FP++  L C+ +  Y IF
Sbjct: 208 YQIIYNVLVMC--LMYTFPLIVILYCYGSIYYEIF 240


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 267 HFLCFFLTHTFYL 229
           HFLC + TH F L
Sbjct: 767 HFLCSYNTHCFAL 779


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,666
Number of Sequences: 2352
Number of extensions: 9508
Number of successful extensions: 225
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)