Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3n17
(732 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 33 0.23
05_04_0127 - 18262499-18263104 32 0.41
10_08_0837 - 20925345-20926178 30 1.6
07_01_0451 - 3404749-3405171,3405444-3405599,3405711-3406583,340... 30 2.2
02_04_0593 + 24177897-24178182,24178442-24178509,24178617-241788... 29 2.9
05_07_0229 - 28537784-28538296 29 3.8
12_02_1234 - 27227262-27227647,27227715-27227781 29 5.0
12_02_0994 + 25095991-25096003,25097183-25097236,25097605-250976... 29 5.0
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 29 5.0
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 29 5.0
07_03_0947 - 22805419-22805571,22805736-22805966,22806161-228063... 29 5.0
08_02_0197 - 14150787-14151440 28 6.6
05_03_0389 - 13409848-13409964,13410049-13410114,13410209-134103... 28 6.6
01_06_0462 + 29561928-29561957,29562101-29562317,29562412-295624... 28 6.6
05_05_0154 - 22774503-22774652,22774738-22774968,22775508-227756... 28 8.8
03_02_1008 - 13170630-13171481 28 8.8
02_03_0262 + 17015383-17015619,17017932-17018879 28 8.8
01_05_0628 - 23806901-23807650 28 8.8
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 436 DGSEMLKAVYHTLDHESPNPDDDSSIEPEANDLDSFIV--LVDRTLQFDDTDGDGYVSYP 609
DG E LK + LD + + + +L + V++ ++ DTDGDG V+Y
Sbjct: 319 DGDEELKEAFEVLDKDQNGFISPTELRTVMTNLGEKMTDEEVEQMIREADTDGDGQVNYD 378
Query: 610 EYRAARARNPSKKAS 654
E+ +N +K S
Sbjct: 379 EF-VIMMKNAERKIS 392
>05_04_0127 - 18262499-18263104
Length = 201
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 553 VDRTLQFDDTDGDGYVSYPEYRAARARNPSKKASRILDNR 672
V R +Q D+DGDGY+S E+ A A P A+ D R
Sbjct: 92 VARMMQEADSDGDGYISLGEFAAISAPPPGDAAAAEEDLR 131
>10_08_0837 - 20925345-20926178
Length = 277
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 214 PHHPPGQTPVERPHHHY 264
P HP +P RPHHHY
Sbjct: 24 PLHPTPTSPTARPHHHY 40
>07_01_0451 -
3404749-3405171,3405444-3405599,3405711-3406583,
3406847-3406942
Length = 515
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 5/110 (4%)
Frame = +1
Query: 250 PHHHYKPMGTGSFTGDSQLLHDAKHLEEDSKVL-----TPAMLASMTPEELEFHYFSIHD 414
PH+H K + F G L A H+ +S VL P +A+ P + +
Sbjct: 400 PHYHLKEVNIAGFYGQKDQLELAHHILRNSVVLQAMNIDPRPIAACDPSRMAI--LEAFN 457
Query: 415 FDRNTKLDGSEMLKAVYHTLDHESPNPDDDSSIEPEANDLDSFIVLVDRT 564
F +K+ + KA + + H S D P + F + D+T
Sbjct: 458 FVDGSKVAMKYLCKADHRNVVHVSDVSRKDVENVPAYRLVSPFWIEFDKT 507
>02_04_0593 +
24177897-24178182,24178442-24178509,24178617-24178840,
24179221-24179304,24180183-24180396,24181242-24181418,
24181507-24181626,24181854-24181998,24182055-24182065,
24182222-24182314
Length = 473
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 361 LASMTPEELEFHYF-SIHDFDRNTKLDGSEMLKAVYHTLDHESPNPDDDSSIEPEANDLD 537
+ + +P E F YF SI + + + +++++AV + S+ E N +
Sbjct: 110 IRTRSPPEKIFEYFASIRNPEGEVYMLPADLMRAVVPVFPPSESKIVREGSLRGERNPGE 169
Query: 538 SFIVLVDRTLQFDDTDGDGYVSYPEY 615
+ + FD T+GDG +S+ EY
Sbjct: 170 LHCAPSEFFMLFD-TNGDGLISFAEY 194
>05_07_0229 - 28537784-28538296
Length = 170
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 559 RTLQFDDTDGDGYVSYPEYRAARARN 636
R ++ DTDGDG +S+ E+ A A++
Sbjct: 137 RMMRDADTDGDGVISFKEFAAVMAKS 162
>12_02_1234 - 27227262-27227647,27227715-27227781
Length = 150
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 403 SIHDFDRNTKLDGSEMLKAVYHTLDHESPNPDDDSS--IEPEANDLDS 540
S+ D D N+ + S ML + D ESP+ SS PE N LD+
Sbjct: 2 SVLDLDINSDDESSSMLGVGHREKDDESPSTSGKSSPPPPPEQNPLDA 49
>12_02_0994 +
25095991-25096003,25097183-25097236,25097605-25097687,
25097825-25097884,25098871-25098958,25098999-25099067,
25099283-25099335,25099829-25099909,25100517-25100629,
25101393-25101555
Length = 258
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/105 (22%), Positives = 50/105 (47%)
Frame = +1
Query: 328 EEDSKVLTPAMLASMTPEELEFHYFSIHDFDRNTKLDGSEMLKAVYHTLDHESPNPDDDS 507
+E ++ L+ ++ E+++F F ++D + ++ E+ + V TL N D+
Sbjct: 102 DEFARALSVFHPSAPLDEKIDFS-FQLYDLKQQGYIERQEVKQMVVATLAESGMNLSDEI 160
Query: 508 SIEPEANDLDSFIVLVDRTLQFDDTDGDGYVSYPEYRAARARNPS 642
++S ++D+T + DT DG + E+R R+PS
Sbjct: 161 --------IES---IIDKTFEEADTKHDGRIDKEEWRNLVLRHPS 194
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 190 GVFALRRGPHHPPGQTPVERPHHHYKPMGTGS 285
G F + P++PP P + HHH G+G+
Sbjct: 92 GYFNQGQQPYYPPPPLPYDHCHHHCGDEGSGA 123
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 400 FSIHDFDRNTKLDGSEMLKAVYHTLDHESPNPDDDSSIEPEANDLD 537
F + +++K + + HT E PNP +IEP+ D D
Sbjct: 10 FLLFSKPKSSKKKPKQEAEPQVHTQPEEPPNPSPSPAIEPDLRDSD 55
>07_03_0947 -
22805419-22805571,22805736-22805966,22806161-22806328,
22806425-22806540,22806853-22807005,22807241-22807384,
22807584-22807707,22808126-22808689
Length = 550
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 430 KLDGSEMLKAVYHTLD-HESPNPDDDSSIEPEANDLDS-FIVLVDRTLQFDDTDGDGYVS 603
K+ E L + D ++S + D E A+DL + +++ ++ DTD DG +S
Sbjct: 446 KIGNDEHLHKAFAYFDRNQSGYIEIDELRESLADDLGANHEEVINAIIRDVDTDKDGKIS 505
Query: 604 YPEYRA-ARARNPSKKASR 657
Y E+ A +A +KASR
Sbjct: 506 YDEFAAMMKAGTDWRKASR 524
>08_02_0197 - 14150787-14151440
Length = 217
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +1
Query: 202 LRRGPHHPPGQTPVERPHHHYKPMGTGSFTGDSQLLHDAKHLEEDSKVLTPAMLASMTP 378
L + P PP P HH +KP+ T + S LL ++D + T TP
Sbjct: 18 LSKNPRTPP-PPPAMHHHHAHKPLITALTSTSSFLLRSVDVSKDDKPLETATTTTPPTP 75
>05_03_0389 -
13409848-13409964,13410049-13410114,13410209-13410325,
13410822-13410893,13410979-13411258,13411528-13411730,
13412230-13412316,13412705-13412758,13413042-13413221,
13414402-13414576,13414628-13414918,13414923-13415344
Length = 687
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/69 (33%), Positives = 28/69 (40%)
Frame = +1
Query: 187 NGVFALRRGPHHPPGQTPVERPHHHYKPMGTGSFTGDSQLLHDAKHLEEDSKVLTPAMLA 366
N VFAL G PP + R HY P G ++L D ED TPA A
Sbjct: 571 NYVFALLTGYRDPPAGVQI-REGLHYNPYFPGGAIAMPKMLIDGAVEYEDG---TPATEA 626
Query: 367 SMTPEELEF 393
M + + F
Sbjct: 627 QMGKDVVSF 635
>01_06_0462 +
29561928-29561957,29562101-29562317,29562412-29562494,
29563065-29563124,29563526-29563634,29563732-29563784,
29564270-29564350,29564431-29564547
Length = 249
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 511 IEPEANDLDSFI-VLVDRTLQFDDTDGDGYVSYPEYRAARARNPS 642
+E E D + ++D+T + DTD D +S E++A ++PS
Sbjct: 194 LESEVQLSDDLVEAILDKTFEDADTDKDNRISKEEWKAFVLKHPS 238
>05_05_0154 -
22774503-22774652,22774738-22774968,22775508-22775675,
22775760-22775936,22776281-22776302,22776351-22776417,
22776583-22776774,22776819-22776962,22778421-22779102
Length = 610
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 487 PNPDDDSSIEPEANDLDSFIVLVDRTLQFDDTDGDGYVSYPEYRA-ARARNPSKKASR 657
P ++ +E A D+ + +V LQ DTD DG +SY E+ A + +KASR
Sbjct: 531 PEELQEALVEDGATDI---MEVVKDILQEVDTDKDGKISYEEFVAMMKTGTDWRKASR 585
>03_02_1008 - 13170630-13171481
Length = 283
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 556 PPAQ*MSLNRLPPVLLKNRHLDSDFHGLKC 467
PPA S++ +P V + RHL D H C
Sbjct: 161 PPATQSSIDAMPTVKITQRHLSGDSHCPVC 190
>02_03_0262 + 17015383-17015619,17017932-17018879
Length = 394
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 430 KLDGSEMLKAVYHTLDHESPNPDDDSSIE 516
K+DG ++ VY++ D+ S DD S E
Sbjct: 323 KMDGKKLYDGVYNSSDYSSDTASDDESDE 351
>01_05_0628 - 23806901-23807650
Length = 249
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 577 DTDGDGYVSYPEYRAARARN 636
DTDGDG +S+ E+ A A++
Sbjct: 220 DTDGDGLISFEEFTAIMAKS 239
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,171,137
Number of Sequences: 37544
Number of extensions: 414301
Number of successful extensions: 1362
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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