Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3n12
         (735 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein.                 31   3.2  
AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein.               31   3.2  
AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein.              31   3.2  
AB209447-1|BAD92684.1| 1289|Homo sapiens Notch homolog 3 variant...    31   3.2  
M75161-1|AAA58617.1|  593|Homo sapiens granulin protein.               30   7.5  
M73980-1|AAA60614.1| 2444|Homo sapiens TAN1 protein.                   30   9.9  
AL592301-5|CAI13934.1| 2555|Homo sapiens Notch homolog 1, transl...    30   9.9  
AL354671-1|CAI16149.1| 2555|Homo sapiens Notch homolog 1, transl...    30   9.9  
AF308602-1|AAG33848.1| 2556|Homo sapiens NOTCH 1 protein.              30   9.9  

>U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein.
          Length = 2321

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
 Frame = +2

Query: 353 TCQECPS---CACPSDF------NPSTP-SMYDCRKYGHCLPSNDLITRFECLPNF 490
           TC   P    C CP+ +      NP+ P +   CR  G C  S DL     CLP F
Sbjct: 173 TCLNTPGSFRCQCPAGYTGPLCENPAVPCAPSPCRNGGTCRQSGDLTYDCACLPGF 228


>AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein.
          Length = 2321

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
 Frame = +2

Query: 353 TCQECPS---CACPSDF------NPSTP-SMYDCRKYGHCLPSNDLITRFECLPNF 490
           TC   P    C CP+ +      NP+ P +   CR  G C  S DL     CLP F
Sbjct: 173 TCLNTPGSFRCQCPAGYTGPLCENPAVPCAPSPCRNGGTCRQSGDLTYDCACLPGF 228


>AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein.
          Length = 2281

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
 Frame = +2

Query: 353 TCQECPS---CACPSDF------NPSTP-SMYDCRKYGHCLPSNDLITRFECLPNF 490
           TC   P    C CP+ +      NP+ P +   CR  G C  S DL     CLP F
Sbjct: 133 TCLNTPGSFRCQCPAGYTGPLCENPAVPCAPSPCRNGGTCRQSGDLTYDCACLPGF 188


>AB209447-1|BAD92684.1| 1289|Homo sapiens Notch homolog 3 variant
           protein.
          Length = 1289

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
 Frame = +2

Query: 353 TCQECPS---CACPSDF------NPSTP-SMYDCRKYGHCLPSNDLITRFECLPNF 490
           TC   P    C CP+ +      NP+ P +   CR  G C  S DL     CLP F
Sbjct: 176 TCLNTPGSFRCQCPAGYTGPLCENPAVPCAPSPCRNGGTCRQSGDLTYDCACLPGF 231


>M75161-1|AAA58617.1|  593|Homo sapiens granulin protein.
          Length = 593

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 12/43 (27%), Positives = 17/43 (39%)
 Frame = +2

Query: 356 CQECPSCACPSDFNPSTPSMYDCRKYGHCLPSNDLITRFECLP 484
           C   P   C SD     P  Y C   G C   ++++   E +P
Sbjct: 388 CCPIPEAVCCSDHQHCCPQRYTCVAEGQCQRGSEIVAGLEKMP 430


>M73980-1|AAA60614.1| 2444|Homo sapiens TAN1 protein.
          Length = 2444

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 368 PSCACPSDFNPSTPSMYDCRKYGHCLPSNDLITRFECLPNF 490
           P+C  P  + P +PS   C+  G C P+ D+     CLP F
Sbjct: 213 PNCERP--YVPCSPS--PCQNGGTCRPTGDVTHECACLPGF 249


>AL592301-5|CAI13934.1| 2555|Homo sapiens Notch homolog 1,
           translocation-associated (Drosophila) protein.
          Length = 2555

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 368 PSCACPSDFNPSTPSMYDCRKYGHCLPSNDLITRFECLPNF 490
           P+C  P  + P +PS   C+  G C P+ D+     CLP F
Sbjct: 213 PNCERP--YVPCSPS--PCQNGGTCRPTGDVTHECACLPGF 249


>AL354671-1|CAI16149.1| 2555|Homo sapiens Notch homolog 1,
           translocation-associated (Drosophila) protein.
          Length = 2555

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 368 PSCACPSDFNPSTPSMYDCRKYGHCLPSNDLITRFECLPNF 490
           P+C  P  + P +PS   C+  G C P+ D+     CLP F
Sbjct: 213 PNCERP--YVPCSPS--PCQNGGTCRPTGDVTHECACLPGF 249


>AF308602-1|AAG33848.1| 2556|Homo sapiens NOTCH 1 protein.
          Length = 2556

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 368 PSCACPSDFNPSTPSMYDCRKYGHCLPSNDLITRFECLPNF 490
           P+C  P  + P +PS   C+  G C P+ D+     CLP F
Sbjct: 213 PNCERP--YVPCSPS--PCQNGGTCRPTGDVTHECACLPGF 249


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,885,318
Number of Sequences: 237096
Number of extensions: 1952129
Number of successful extensions: 3290
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3285
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)