Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3n12
         (735 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023572-1|AAY84972.1|  283|Drosophila melanogaster IP09524p pro...    30   2.8  
AE014296-401|AAF47602.1|  283|Drosophila melanogaster CG11815-PA...    30   2.8  
AE014298-2968|AAF45369.1|  441|Drosophila melanogaster CG9572-PA...    30   3.8  
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC...    29   6.6  

>BT023572-1|AAY84972.1|  283|Drosophila melanogaster IP09524p
           protein.
          Length = 283

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 501 YFGAPPTLGSGADKGCCYQCPEYFAYQHMTFYDL 602
           + G    LG GA K   Y+ P YF Y   +F +L
Sbjct: 67  FSGPDEKLGPGAGKALPYKNPTYFGYHRFSFMEL 100


>AE014296-401|AAF47602.1|  283|Drosophila melanogaster CG11815-PA
           protein.
          Length = 283

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 501 YFGAPPTLGSGADKGCCYQCPEYFAYQHMTFYDL 602
           + G    LG GA K   Y+ P YF Y   +F +L
Sbjct: 67  FSGPDEKLGPGAGKALPYKNPTYFGYHRFSFMEL 100


>AE014298-2968|AAF45369.1|  441|Drosophila melanogaster CG9572-PA
           protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = +2

Query: 335 VETNKETCQECPSCACPSDF--NPSTPSMYDCRKYGHCLPSNDLITRFECLP 484
           V T  E     P+C+C   +  NP +   ++C   G C   +   + F+C+P
Sbjct: 177 VNTKCEIINGVPTCSCVHGYVGNPLSGCRHECDHDGDCSSRDMCSSNFKCVP 228


>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
            protein.
          Length = 4699

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +2

Query: 353  TCQECPSCACPSDFNPSTPSMYDCRKYGHCLPSNDLITRFE 475
            T   C     PS   P+  S Y CR    CL + D+   FE
Sbjct: 910  TGSHCIPQLAPSPIRPNCTSGYMCRSTRQCLDTKDMCDGFE 950


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,587,303
Number of Sequences: 53049
Number of extensions: 604036
Number of successful extensions: 1340
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)